VIRsiRNAdb
Database of Viral siRNA / shRNA
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Family of Virus
Virus Name
Gene Name
Pubmed Id
VsiRNAid
Total number of Results for
19129458
are
1
Results from
0 - 25
VIRsiRNAid
siRNA Sequence
Virus_Name
Target Region
Cell Line
Test Object
Efficacy
PMID
Offtarget
Align With
ALIGN0 Result
virsi1917
uugccuucgaccuuuacgu
Herpes Simplex Virus [HSV]
ORF75
HEK 293T
mRNA
95
19129458
Blast
SL
refseqs
     
siRNA sequence "
uugccuucgaccuuuacgu
" alignment with "
Herpes Simplex Virus [HSV]
" virus reference Genome sequences
Sorry unable to load image
Browse all the records for "
Herpes Simplex Virus [HSV]
" virus
Browse "
virsi1917
" record
Length:
19
GC Content:
47 %
Starting position:
132182
Strain of Virus:
HHV-8
GenBank Acc:
AF148805
Transfection Reagent:
Lipofectamine
Incubation Time (Hours):
48
Offtargets for "
uugccuucgaccuuuacgu
" siRNA in Human Genome sequences
See
AF148805
at Genbank
Pubmed:
19129458
Article:
A systems biology approach to identify the combination effects of human herpesvirus 8 genes on NF-kappaB activation.
Authors:
Konrad A, Wies E, Thurau M, Marquardt G, Naschberger E, Hentschel S, Jochmann R, Schulz TF, Erfle H, Brors B, Lausen B, Neipel F, Strzl M.
Journal:
J Virol. 2009 Mar;83(6):2563-74. Epub 2009 Jan 7.
Entrez:
19129458
: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL
: siRNA seedlocator algorithm