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- Family of Virus
- Virus Name
- Gene Name
- Pubmed Id
- VsiRNAid
Total number of Results for 19887612 are 8
Results from 0 - 25
siRNA sequence "auagugaccuguugcugug" alignment with "Human Papillomavirus [HPV]" virus reference Genome sequences
siRNA sequence matching with "auagugaccuguugcugug" Human Papillomavirus [HPV]" Virus reference Genome sequences
Browse all the records for "Human Papillomavirus [HPV]" virus
Browse "virsi1690 " record
Length: 19
GC Content:47 %
Starting position: 689
Strain of Virus: HPV6b
GenBank Acc: X00203
Transfection Reagent: Lipofectamine 2000
Length: 19
GC Content:47 %
Starting position: 689
Strain of Virus: HPV6b
GenBank Acc: X00203
Transfection Reagent: Lipofectamine 2000
Offtargets for "auagugaccuguugcugug" siRNA in Human Genome sequences
See X00203 at Genbank
Pubmed:19887612
Article:Epigenetic silencing of interferon-kappa in human papillomavirus type 16-positive cells.
Authors:Rincon-Orozco B, Halec G, Rosenberger S, Muschik D, Nindl I, Bachmann A, Ritter TM, Dondog B, Ly R, Bosch FX, Zawatzky R, Rösl F.
Journal:Cancer Res. 2009 Nov 15;69(22):8718-25. Epub 2009 Nov 3.
Entrez:19887612
Article:Epigenetic silencing of interferon-kappa in human papillomavirus type 16-positive cells.
Authors:Rincon-Orozco B, Halec G, Rosenberger S, Muschik D, Nindl I, Bachmann A, Ritter TM, Dondog B, Ly R, Bosch FX, Zawatzky R, Rösl F.
Journal:Cancer Res. 2009 Nov 15;69(22):8718-25. Epub 2009 Nov 3.
Entrez:19887612
siRNA sequence "acaagacgcacaaccuuua" alignment with "Human Papillomavirus [HPV]" virus reference Genome sequences
siRNA sequence matching with "acaagacgcacaaccuuua" Human Papillomavirus [HPV]" Virus reference Genome sequences
Browse all the records for "Human Papillomavirus [HPV]" virus
Browse "virsi1689 " record
Length: 19
GC Content:42 %
Starting position: 655
Strain of Virus: HPV11
GenBank Acc: FN907963
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Length: 19
GC Content:42 %
Starting position: 655
Strain of Virus: HPV11
GenBank Acc: FN907963
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):72
Offtargets for "acaagacgcacaaccuuua" siRNA in Human Genome sequences
See FN907963 at Genbank
Pubmed:19887612
Article:Epigenetic silencing of interferon-kappa in human papillomavirus type 16-positive cells.
Authors:Rincon-Orozco B, Halec G, Rosenberger S, Muschik D, Nindl I, Bachmann A, Ritter TM, Dondog B, Ly R, Bosch FX, Zawatzky R, Rösl F.
Journal:Cancer Res. 2009 Nov 15;69(22):8718-25. Epub 2009 Nov 3.
Entrez:19887612
Article:Epigenetic silencing of interferon-kappa in human papillomavirus type 16-positive cells.
Authors:Rincon-Orozco B, Halec G, Rosenberger S, Muschik D, Nindl I, Bachmann A, Ritter TM, Dondog B, Ly R, Bosch FX, Zawatzky R, Rösl F.
Journal:Cancer Res. 2009 Nov 15;69(22):8718-25. Epub 2009 Nov 3.
Entrez:19887612
siRNA sequence "cgcgguucauaaagcuaaa" alignment with "Human Papillomavirus [HPV]" virus reference Genome sequences
siRNA sequence matching with "cgcgguucauaaagcuaaa" Human Papillomavirus [HPV]" Virus reference Genome sequences
Browse all the records for "Human Papillomavirus [HPV]" virus
Browse "virsi1691 " record
Length: 19
GC Content:42 %
Starting position: 472
Strain of Virus: HPV6b
GenBank Acc: X00203
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 19
GC Content:42 %
Starting position: 472
Strain of Virus: HPV6b
GenBank Acc: X00203
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "cgcgguucauaaagcuaaa" siRNA in Human Genome sequences
See X00203 at Genbank
Pubmed:19887612
Article:Epigenetic silencing of interferon-kappa in human papillomavirus type 16-positive cells.
Authors:Rincon-Orozco B, Halec G, Rosenberger S, Muschik D, Nindl I, Bachmann A, Ritter TM, Dondog B, Ly R, Bosch FX, Zawatzky R, Rösl F.
Journal:Cancer Res. 2009 Nov 15;69(22):8718-25. Epub 2009 Nov 3.
Entrez:19887612
Article:Epigenetic silencing of interferon-kappa in human papillomavirus type 16-positive cells.
Authors:Rincon-Orozco B, Halec G, Rosenberger S, Muschik D, Nindl I, Bachmann A, Ritter TM, Dondog B, Ly R, Bosch FX, Zawatzky R, Rösl F.
Journal:Cancer Res. 2009 Nov 15;69(22):8718-25. Epub 2009 Nov 3.
Entrez:19887612
siRNA sequence "agacaucuuagacgugcua" alignment with "Human Papillomavirus [HPV]" virus reference Genome sequences
siRNA sequence matching with "agacaucuuagacgugcua" Human Papillomavirus [HPV]" Virus reference Genome sequences
Browse all the records for "Human Papillomavirus [HPV]" virus
Browse "virsi1692 " record
Length: 19
GC Content:42 %
Starting position: 386
Strain of Virus: HPV6b
GenBank Acc: X00203
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 19
GC Content:42 %
Starting position: 386
Strain of Virus: HPV6b
GenBank Acc: X00203
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "agacaucuuagacgugcua" siRNA in Human Genome sequences
See X00203 at Genbank
Pubmed:19887612
Article:Epigenetic silencing of interferon-kappa in human papillomavirus type 16-positive cells.
Authors:Rincon-Orozco B, Halec G, Rosenberger S, Muschik D, Nindl I, Bachmann A, Ritter TM, Dondog B, Ly R, Bosch FX, Zawatzky R, Rösl F.
Journal:Cancer Res. 2009 Nov 15;69(22):8718-25. Epub 2009 Nov 3.
Entrez:19887612
Article:Epigenetic silencing of interferon-kappa in human papillomavirus type 16-positive cells.
Authors:Rincon-Orozco B, Halec G, Rosenberger S, Muschik D, Nindl I, Bachmann A, Ritter TM, Dondog B, Ly R, Bosch FX, Zawatzky R, Rösl F.
Journal:Cancer Res. 2009 Nov 15;69(22):8718-25. Epub 2009 Nov 3.
Entrez:19887612
siRNA sequence "gaccacagcagagauuuau" alignment with "Human Papillomavirus [HPV]" virus reference Genome sequences
siRNA sequence matching with "gaccacagcagagauuuau" Human Papillomavirus [HPV]" Virus reference Genome sequences
Browse all the records for "Human Papillomavirus [HPV]" virus
Browse "virsi1693 " record
Length: 19
GC Content:42 %
Starting position: 215
Strain of Virus: HPV6b
GenBank Acc: X00203
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 19
GC Content:42 %
Starting position: 215
Strain of Virus: HPV6b
GenBank Acc: X00203
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "gaccacagcagagauuuau" siRNA in Human Genome sequences
See X00203 at Genbank
Pubmed:19887612
Article:Epigenetic silencing of interferon-kappa in human papillomavirus type 16-positive cells.
Authors:Rincon-Orozco B, Halec G, Rosenberger S, Muschik D, Nindl I, Bachmann A, Ritter TM, Dondog B, Ly R, Bosch FX, Zawatzky R, Rösl F.
Journal:Cancer Res. 2009 Nov 15;69(22):8718-25. Epub 2009 Nov 3.
Entrez:19887612
Article:Epigenetic silencing of interferon-kappa in human papillomavirus type 16-positive cells.
Authors:Rincon-Orozco B, Halec G, Rosenberger S, Muschik D, Nindl I, Bachmann A, Ritter TM, Dondog B, Ly R, Bosch FX, Zawatzky R, Rösl F.
Journal:Cancer Res. 2009 Nov 15;69(22):8718-25. Epub 2009 Nov 3.
Entrez:19887612
siRNA sequence "acaagacgcacaaccuuua" alignment with "Human Papillomavirus [HPV]" virus reference Genome sequences
siRNA sequence matching with "acaagacgcacaaccuuua" Human Papillomavirus [HPV]" Virus reference Genome sequences
Browse all the records for "Human Papillomavirus [HPV]" virus
Browse "virsi1694 " record
Length: 19
GC Content:42 %
Starting position: 655
Strain of Virus: HPV11
GenBank Acc: FN907963
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 19
GC Content:42 %
Starting position: 655
Strain of Virus: HPV11
GenBank Acc: FN907963
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "acaagacgcacaaccuuua" siRNA in Human Genome sequences
See FN907963 at Genbank
Pubmed:19887612
Article:Epigenetic silencing of interferon-kappa in human papillomavirus type 16-positive cells.
Authors:Rincon-Orozco B, Halec G, Rosenberger S, Muschik D, Nindl I, Bachmann A, Ritter TM, Dondog B, Ly R, Bosch FX, Zawatzky R, Rösl F.
Journal:Cancer Res. 2009 Nov 15;69(22):8718-25. Epub 2009 Nov 3.
Entrez:19887612
Article:Epigenetic silencing of interferon-kappa in human papillomavirus type 16-positive cells.
Authors:Rincon-Orozco B, Halec G, Rosenberger S, Muschik D, Nindl I, Bachmann A, Ritter TM, Dondog B, Ly R, Bosch FX, Zawatzky R, Rösl F.
Journal:Cancer Res. 2009 Nov 15;69(22):8718-25. Epub 2009 Nov 3.
Entrez:19887612
siRNA sequence "acauugcuaugagcaauua" alignment with "Human Papillomavirus [HPV]" virus reference Genome sequences
siRNA sequence matching with "acauugcuaugagcaauua" Human Papillomavirus [HPV]" Virus reference Genome sequences
Browse all the records for "Human Papillomavirus [HPV]" virus
Browse "virsi1695 " record
Length: 19
GC Content:32 %
Starting position: 598
Strain of Virus: HPV11
GenBank Acc: FN907963
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 19
GC Content:32 %
Starting position: 598
Strain of Virus: HPV11
GenBank Acc: FN907963
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "acauugcuaugagcaauua" siRNA in Human Genome sequences
See FN907963 at Genbank
Pubmed:19887612
Article:Epigenetic silencing of interferon-kappa in human papillomavirus type 16-positive cells.
Authors:Rincon-Orozco B, Halec G, Rosenberger S, Muschik D, Nindl I, Bachmann A, Ritter TM, Dondog B, Ly R, Bosch FX, Zawatzky R, Rösl F.
Journal:Cancer Res. 2009 Nov 15;69(22):8718-25. Epub 2009 Nov 3.
Entrez:19887612
Article:Epigenetic silencing of interferon-kappa in human papillomavirus type 16-positive cells.
Authors:Rincon-Orozco B, Halec G, Rosenberger S, Muschik D, Nindl I, Bachmann A, Ritter TM, Dondog B, Ly R, Bosch FX, Zawatzky R, Rösl F.
Journal:Cancer Res. 2009 Nov 15;69(22):8718-25. Epub 2009 Nov 3.
Entrez:19887612
siRNA sequence "cggagacaucagacaacua" alignment with "Human Papillomavirus [HPV]" virus reference Genome sequences
siRNA sequence matching with "cggagacaucagacaacua" Human Papillomavirus [HPV]" Virus reference Genome sequences
Browse all the records for "Human Papillomavirus [HPV]" virus
Browse "virsi1696 " record
Length: 19
GC Content:47 %
Starting position: 748
Strain of Virus: HPV11
GenBank Acc: FN907963
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 19
GC Content:47 %
Starting position: 748
Strain of Virus: HPV11
GenBank Acc: FN907963
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "cggagacaucagacaacua" siRNA in Human Genome sequences
See FN907963 at Genbank
Pubmed:19887612
Article:Epigenetic silencing of interferon-kappa in human papillomavirus type 16-positive cells.
Authors:Rincon-Orozco B, Halec G, Rosenberger S, Muschik D, Nindl I, Bachmann A, Ritter TM, Dondog B, Ly R, Bosch FX, Zawatzky R, Rösl F.
Journal:Cancer Res. 2009 Nov 15;69(22):8718-25. Epub 2009 Nov 3.
Entrez:19887612
Article:Epigenetic silencing of interferon-kappa in human papillomavirus type 16-positive cells.
Authors:Rincon-Orozco B, Halec G, Rosenberger S, Muschik D, Nindl I, Bachmann A, Ritter TM, Dondog B, Ly R, Bosch FX, Zawatzky R, Rösl F.
Journal:Cancer Res. 2009 Nov 15;69(22):8718-25. Epub 2009 Nov 3.
Entrez:19887612
| VIRsiRNAid | siRNA Sequence |  Virus_Name | Target Region | Cell Line | Test Object | Efficacy | PMID | Offtarget | Align With | ALIGN0 Result |
|---|---|---|---|---|---|---|---|---|---|---|
| virsi1690 | auagugaccuguugcugug | Human Papillomavirus [HPV] |  SL | refseqs |  | |||||
| virsi1689 | acaagacgcacaaccuuua | Human Papillomavirus [HPV] |  SL | refseqs |  | |||||
| virsi1691 | cgcgguucauaaagcuaaa | Human Papillomavirus [HPV] | SL | refseqs |  | |||||
| virsi1692 | agacaucuuagacgugcua | Human Papillomavirus [HPV] | SL | refseqs |  | |||||
| virsi1693 | gaccacagcagagauuuau | Human Papillomavirus [HPV] | SL | refseqs |  | |||||
| virsi1694 | acaagacgcacaaccuuua | Human Papillomavirus [HPV] | SL | refseqs |  | |||||
| virsi1695 | acauugcuaugagcaauua | Human Papillomavirus [HPV] | SL | refseqs |  | |||||
| virsi1696 | cggagacaucagacaacua | Human Papillomavirus [HPV] | SL | refseqs |  |
: siRNA specific for both strands: siRNA specific for only one strands
: siRNA Not specific SL: siRNA seedlocator algorithm