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- Virus Name
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- VsiRNAid
Total number of Results for 21073745 are 5
Results from 0 - 25
siRNA sequence "gacgggauaaauuucgcaa" alignment with "Hepatitis C Virus [HCV]" virus reference Genome sequences
siRNA sequence matching with "gacgggauaaauuucgcaa" Hepatitis C Virus [HCV]" Virus reference Genome sequences
Browse all the records for "Hepatitis C Virus [HCV]" virus
Browse "virsi1980 " record
Length: 19
GC Content:42 %
Starting position: 817
Strain of Virus: Genotype 3a
GenBank Acc: D17763
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 19
GC Content:42 %
Starting position: 817
Strain of Virus: Genotype 3a
GenBank Acc: D17763
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "gacgggauaaauuucgcaa" siRNA in Human Genome sequences
See D17763 at Genbank
Pubmed:21073745
Article:Inhibition of core gene of HCV 3a genotype using synthetic and vector derived siRNAs.
Authors:Khaliq S, Jahan S, Ijaz B, Ahmad W, Asad S, Pervaiz A, Samreen B, Khan M, Hassan S.
Journal:Virol J. 2010 Nov 13;7:318.
Entrez:21073745
Article:Inhibition of core gene of HCV 3a genotype using synthetic and vector derived siRNAs.
Authors:Khaliq S, Jahan S, Ijaz B, Ahmad W, Asad S, Pervaiz A, Samreen B, Khan M, Hassan S.
Journal:Virol J. 2010 Nov 13;7:318.
Entrez:21073745
siRNA sequence "accucaaagaaaaaccaaa" alignment with "Hepatitis C Virus [HCV]" virus reference Genome sequences
siRNA sequence matching with "accucaaagaaaaaccaaa" Hepatitis C Virus [HCV]" Virus reference Genome sequences
Browse all the records for "Hepatitis C Virus [HCV]" virus
Browse "virsi1976 " record
Length: 19
GC Content:32 %
Starting position: 357
Strain of Virus: Genotype 3a
GenBank Acc: D17763
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 19
GC Content:32 %
Starting position: 357
Strain of Virus: Genotype 3a
GenBank Acc: D17763
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "accucaaagaaaaaccaaa" siRNA in Human Genome sequences
See D17763 at Genbank
Pubmed:21073745
Article:Inhibition of core gene of HCV 3a genotype using synthetic and vector derived siRNAs.
Authors:Khaliq S, Jahan S, Ijaz B, Ahmad W, Asad S, Pervaiz A, Samreen B, Khan M, Hassan S.
Journal:Virol J. 2010 Nov 13;7:318.
Entrez:21073745
Article:Inhibition of core gene of HCV 3a genotype using synthetic and vector derived siRNAs.
Authors:Khaliq S, Jahan S, Ijaz B, Ahmad W, Asad S, Pervaiz A, Samreen B, Khan M, Hassan S.
Journal:Virol J. 2010 Nov 13;7:318.
Entrez:21073745
siRNA sequence "uuuggguaaagucaucgau" alignment with "Hepatitis C Virus [HCV]" virus reference Genome sequences
siRNA sequence matching with "uuuggguaaagucaucgau" Hepatitis C Virus [HCV]" Virus reference Genome sequences
Browse all the records for "Hepatitis C Virus [HCV]" virus
Browse "virsi1979 " record
Length: 19
GC Content:37 %
Starting position: 693
Strain of Virus: Genotype 3a
GenBank Acc: D17763
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 19
GC Content:37 %
Starting position: 693
Strain of Virus: Genotype 3a
GenBank Acc: D17763
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "uuuggguaaagucaucgau" siRNA in Human Genome sequences
See D17763 at Genbank
Pubmed:21073745
Article:Inhibition of core gene of HCV 3a genotype using synthetic and vector derived siRNAs.
Authors:Khaliq S, Jahan S, Ijaz B, Ahmad W, Asad S, Pervaiz A, Samreen B, Khan M, Hassan S.
Journal:Virol J. 2010 Nov 13;7:318.
Entrez:21073745
Article:Inhibition of core gene of HCV 3a genotype using synthetic and vector derived siRNAs.
Authors:Khaliq S, Jahan S, Ijaz B, Ahmad W, Asad S, Pervaiz A, Samreen B, Khan M, Hassan S.
Journal:Virol J. 2010 Nov 13;7:318.
Entrez:21073745
siRNA sequence "accaaaagaaacaccaucc" alignment with "Hepatitis C Virus [HCV]" virus reference Genome sequences
siRNA sequence matching with "accaaaagaaacaccaucc" Hepatitis C Virus [HCV]" Virus reference Genome sequences
Browse all the records for "Hepatitis C Virus [HCV]" virus
Browse "virsi1977 " record
Length: 19
GC Content:42 %
Starting position: 370
Strain of Virus: Genotype 3a
GenBank Acc: D17763
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 19
GC Content:42 %
Starting position: 370
Strain of Virus: Genotype 3a
GenBank Acc: D17763
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "accaaaagaaacaccaucc" siRNA in Human Genome sequences
See D17763 at Genbank
Pubmed:21073745
Article:Inhibition of core gene of HCV 3a genotype using synthetic and vector derived siRNAs.
Authors:Khaliq S, Jahan S, Ijaz B, Ahmad W, Asad S, Pervaiz A, Samreen B, Khan M, Hassan S.
Journal:Virol J. 2010 Nov 13;7:318.
Entrez:21073745
Article:Inhibition of core gene of HCV 3a genotype using synthetic and vector derived siRNAs.
Authors:Khaliq S, Jahan S, Ijaz B, Ahmad W, Asad S, Pervaiz A, Samreen B, Khan M, Hassan S.
Journal:Virol J. 2010 Nov 13;7:318.
Entrez:21073745
siRNA sequence "aacuucugaacggucacag" alignment with "Hepatitis C Virus [HCV]" virus reference Genome sequences
siRNA sequence matching with "aacuucugaacggucacag" Hepatitis C Virus [HCV]" Virus reference Genome sequences
Browse all the records for "Hepatitis C Virus [HCV]" virus
Browse "virsi1978 " record
Length: 19
GC Content:47 %
Starting position: 492
Strain of Virus: Genotype 3a
GenBank Acc: D17763
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Length: 19
GC Content:47 %
Starting position: 492
Strain of Virus: Genotype 3a
GenBank Acc: D17763
Transfection Reagent: Lipofectamine 2000
Incubation Time (Hours):48
Offtargets for "aacuucugaacggucacag" siRNA in Human Genome sequences
See D17763 at Genbank
Pubmed:21073745
Article:Inhibition of core gene of HCV 3a genotype using synthetic and vector derived siRNAs.
Authors:Khaliq S, Jahan S, Ijaz B, Ahmad W, Asad S, Pervaiz A, Samreen B, Khan M, Hassan S.
Journal:Virol J. 2010 Nov 13;7:318.
Entrez:21073745
Article:Inhibition of core gene of HCV 3a genotype using synthetic and vector derived siRNAs.
Authors:Khaliq S, Jahan S, Ijaz B, Ahmad W, Asad S, Pervaiz A, Samreen B, Khan M, Hassan S.
Journal:Virol J. 2010 Nov 13;7:318.
Entrez:21073745
| VIRsiRNAid | siRNA Sequence |  Virus_Name | Target Region | Cell Line | Test Object | Efficacy | PMID | Offtarget | Align With | ALIGN0 Result |
|---|---|---|---|---|---|---|---|---|---|---|
| virsi1980 | gacgggauaaauuucgcaa | Hepatitis C Virus [HCV] |  SL | refseqs |  | |||||
| virsi1976 | accucaaagaaaaaccaaa | Hepatitis C Virus [HCV] |  SL | refseqs |  | |||||
| virsi1979 | uuuggguaaagucaucgau | Hepatitis C Virus [HCV] |  SL | refseqs |  | |||||
| virsi1977 | accaaaagaaacaccaucc | Hepatitis C Virus [HCV] | SL | refseqs |  | |||||
| virsi1978 | aacuucugaacggucacag | Hepatitis C Virus [HCV] | SL | refseqs |  |
: siRNA specific for both strands: siRNA specific for only one strands: siRNA Not specific SL: siRNA seedlocator algorithm