VIRsiRNAdb
Database of Viral siRNA / shRNA
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Family of Virus
Virus Name
Gene Name
Pubmed Id
VsiRNAid
Total number of Results for
virsi2154
are
1
Results from
0 - 25
VIRsiRNAid
siRNA Sequence
Virus_Name
Target Region
Cell Line
Test Object
Efficacy
PMID
Offtarget
Align With
ALIGN0 Result
virsi2154
gcgucuagccauggcguua
Hepatitis C Virus [HCV]
5'UTR
Huh-7
Protein
High
12740604
Blast
SL
refseqs
     
siRNA sequence "
gcgucuagccauggcguua
" alignment with "
Hepatitis C Virus [HCV]
" virus reference Genome sequences
siRNA sequence matching with "
gcgucuagccauggcguua
"
Hepatitis C Virus [HCV]
" Virus reference Genome sequences
Browse all the records for "
Hepatitis C Virus [HCV]
" virus
Browse "
virsi2154
" record
Length:
19
GC Content:
58 %
GenBank Acc:
NC_004102
Transfection Reagent:
Lipofectamine 2000
Incubation Time (Hours):
48
Offtargets for "
gcgucuagccauggcguua
" siRNA in Human Genome sequences
See
NC_004102
at Genbank
Pubmed:
12740604
Article:
Inhibition of intracellular hepatitis C virus replication by synthetic and vector-derived small interfering RNAs.
Authors:
Yokota T, Sakamoto N, Enomoto N, Tanabe Y, Miyagishi M, Maekawa S, Yi L, Kurosaki M, Taira K, Watanabe M, Mizusawa H.
Journal:
EMBO Rep. 2003 Jun;4(6):602-8.
Entrez:
12740604
: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL
: siRNA seedlocator algorithm