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Total number of Results for 17979991 are 6
Results from 0 - 25

siRNA sequence "aucaacaccauaaaguacc" alignment with "Herpes Simplex Virus [HSV]" virus reference Genome sequences
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Browse all the records for "Herpes Simplex Virus [HSV]" virus
Browse "virsi1891 " record
Length: 19
GC Content:37 %
Starting position: 1838
Strain of Virus: HSV-1
GenBank Acc: K03350
Transfection Reagent: Lipofectin
Incubation Time (Hours):48

Offtargets for "aucaacaccauaaaguacc" siRNA in Human Genome sequences
See K03350 at Genbank
Pubmed:17979991
Article:Inhibition of herpes simplex virus type 1 by small interfering RNA.
Authors:Zhang YQ, Lai W, Li H, Li G.
Journal:Clin Exp Dermatol. 2008 Jan;33(1):56-61. Epub 2007 Nov 2.
Entrez:17979991

siRNA sequence "gguacaacaucaucaacuu" alignment with "Herpes Simplex Virus [HSV]" virus reference Genome sequences
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Browse all the records for "Herpes Simplex Virus [HSV]" virus
Browse "virsi1892 " record
Length: 19
GC Content:37 %
Starting position: 1391
Strain of Virus: HSV-1
GenBank Acc: AX358316
Transfection Reagent: Lipofectin
Incubation Time (Hours):48

Offtargets for "gguacaacaucaucaacuu" siRNA in Human Genome sequences
See AX358316 at Genbank
Pubmed:17979991
Article:Inhibition of herpes simplex virus type 1 by small interfering RNA.
Authors:Zhang YQ, Lai W, Li H, Li G.
Journal:Clin Exp Dermatol. 2008 Jan;33(1):56-61. Epub 2007 Nov 2.
Entrez:17979991

siRNA sequence "cccgguucauccuggacaa" alignment with "Herpes Simplex Virus [HSV]" virus reference Genome sequences
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Browse all the records for "Herpes Simplex Virus [HSV]" virus
Browse "virsi1893 " record
Length: 19
GC Content:58 %
Starting position: 902
Strain of Virus: HSV-1
GenBank Acc: AX358316
Transfection Reagent: Lipofectin
Incubation Time (Hours):48

Offtargets for "cccgguucauccuggacaa" siRNA in Human Genome sequences
See AX358316 at Genbank
Pubmed:17979991
Article:Inhibition of herpes simplex virus type 1 by small interfering RNA.
Authors:Zhang YQ, Lai W, Li H, Li G.
Journal:Clin Exp Dermatol. 2008 Jan;33(1):56-61. Epub 2007 Nov 2.
Entrez:17979991

siRNA sequence "gaucaccgagagucuguua" alignment with "Herpes Simplex Virus [HSV]" virus reference Genome sequences
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Browse all the records for "Herpes Simplex Virus [HSV]" virus
Browse "virsi1894 " record
Length: 19
GC Content:47 %
Starting position: 3546
Strain of Virus: HSV-1
GenBank Acc: AX358316
Transfection Reagent: Lipofectin
Incubation Time (Hours):48

Offtargets for "gaucaccgagagucuguua" siRNA in Human Genome sequences
See AX358316 at Genbank
Pubmed:17979991
Article:Inhibition of herpes simplex virus type 1 by small interfering RNA.
Authors:Zhang YQ, Lai W, Li H, Li G.
Journal:Clin Exp Dermatol. 2008 Jan;33(1):56-61. Epub 2007 Nov 2.
Entrez:17979991

siRNA sequence "uaucgagcaugguacauag" alignment with "Herpes Simplex Virus [HSV]" virus reference Genome sequences
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Browse all the records for "Herpes Simplex Virus [HSV]" virus
Browse "virsi1895 " record
Length: 19
GC Content:42 %
Starting position: 1066
Strain of Virus: HSV-1
GenBank Acc: K03350
Transfection Reagent: Lipofectin
Incubation Time (Hours):48

Offtargets for "uaucgagcaugguacauag" siRNA in Human Genome sequences
See K03350 at Genbank
Pubmed:17979991
Article:Inhibition of herpes simplex virus type 1 by small interfering RNA.
Authors:Zhang YQ, Lai W, Li H, Li G.
Journal:Clin Exp Dermatol. 2008 Jan;33(1):56-61. Epub 2007 Nov 2.
Entrez:17979991

siRNA sequence "ugcucgcgaaugugguuua" alignment with "Herpes Simplex Virus [HSV]" virus reference Genome sequences
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Browse all the records for "Herpes Simplex Virus [HSV]" virus
Browse "virsi1896 " record
Length: 19
GC Content:47 %
Starting position: 1721
Strain of Virus: HSV-1
GenBank Acc: K03350
Transfection Reagent: Lipofectin
Incubation Time (Hours):48

Offtargets for "ugcucgcgaaugugguuua" siRNA in Human Genome sequences
See K03350 at Genbank
Pubmed:17979991
Article:Inhibition of herpes simplex virus type 1 by small interfering RNA.
Authors:Zhang YQ, Lai W, Li H, Li G.
Journal:Clin Exp Dermatol. 2008 Jan;33(1):56-61. Epub 2007 Nov 2.
Entrez:17979991


VIRsiRNAid	siRNA Sequence	Virus_Name	Target Region	Cell Line	Test Object	Efficacy	PMID	Offtarget	Align With	ALIGN0 Result
virsi1891	aucaacaccauaaaguacc	Herpes Simplex Virus [HSV]	Vp 16	Vero	Cell Count	85	17979991	Blast SL	refseqs
virsi1892	gguacaacaucaucaacuu	Herpes Simplex Virus [HSV]	DNA Pol	Vero	Cell Count	70	17979991	Blast SL	refseqs
virsi1893	cccgguucauccuggacaa	Herpes Simplex Virus [HSV]	DNA Pol	Vero	Cell Count	Low	17979991	Blast SL	refseqs
virsi1894	gaucaccgagagucuguua	Herpes Simplex Virus [HSV]	DNA Pol	Vero	Cell Count	Low	17979991	Blast SL	refseqs
virsi1895	uaucgagcaugguacauag	Herpes Simplex Virus [HSV]	Vp 16	Vero	Cell Count	Low	17979991	Blast SL	refseqs
virsi1896	ugcucgcgaaugugguuua	Herpes Simplex Virus [HSV]	Vp 16	Vero	Cell Count	Low	17979991	Blast SL	refseqs



: siRNA specific for both strands
: siRNA specific for only one strands
: siRNA Not specific
SL: siRNA seedlocator algorithm