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Ahmad Mir , Manzoor (2009) Costimulatory molecules mediated regulation of the activation and differentiation of antigen presenting cells. PhD thesis, CSIR-IMTECH, Chandigarh/ Jawaharlal Nehru University, New Delhi: India.
Ahmed, Firoz and Ansari, Hifzur Rahman and Raghava, G.P.S. (2009) Prediction of guide strand of microRNAs from its sequence and secondary structure. BMC bioinformatics, 10. p. 105. ISSN 1471-2105
Ahmed, Firoz and Kumar, Manish and Raghava, G.P.S. (2009) Prediction of polyadenylation signals in human DNA sequences using nucleotide frequencies. In silico biology, 9 (3). pp. 135-48. ISSN 1386-6338
Alam, Md Suhail and Garg, Saurabh K and Agrawal, Pushpa (2009) Studies on structural and functional divergence among seven WhiB proteins of Mycobacterium tuberculosis H37Rv. The FEBS journal, 276 (1). pp. 76-93. ISSN 1742-4658
Amin-ul Mannan, M and Sharma, Sushma and Ganesan, K (2009) Total RNA isolation from recalcitrant yeast cells. Analytical biochemistry, 389 (1). pp. 77-9. ISSN 1096-0309
Anand, Arvind (2009) Identification of cellular partner of VHb and studies on protein-protein interactions to explore novel function(s) of vitreoscilla hemoglobin. PhD thesis, CSIR-IMTECH, Chandigarh/ Jawaharlal Nehru University, New Delhi: India.
Aneja, Rachna and Datt, Manish and Singh, Balvinder and Kumar, Shekhar and Sahni, Girish (2009) Identification of a new exosite involved in catalytic turnover by the streptokinase-plasmin activator complex during human plasminogen activation. The Journal of biological chemistry, 284 (47). pp. 32642-50. ISSN 1083-351X
Arora, Pankaj Kumar and Kumar, Manish and Chauhan, Archana and Raghava, G.P.S. and Jain, R K (2009) OxDBase: a database of oxygenases involved in biodegradation. BMC research notes, 2. p. 67. ISSN 1756-0500
Bajpai, Richa (2009) Molecular and functional analysis of integrase gene of bacteriphase PIS 136. PhD thesis, CSIR-IMTECH, Chandigarh/ Jawaharlal Nehru University, New Delhi: India..
Bhattacharya, A (2009) Study of prokaryotic diversity fromn selected niches of western ghats of India. PhD thesis, CSIR-IMTECH, Chandigarh/ Jawaharlal Nehru University, New Delhi: India.
Boro, Robin C and Singh, K Vikas and Suri, C Raman (2009) Characterization of hapten-protein conjugates: antibody generation and immunoassay development for chlorophenoxyacetic acid pesticides. Journal of AOAC International, 92 (6). pp. 1773-9. ISSN 1060-3271
Cameotra, Swaranjit Singh and Singh, Pooja (2009) Synthesis of rhamnolipid biosurfactant and mode of hexadecane uptake by Pseudomonas species. Microbial cell factories, 8. p. 16. ISSN 1475-2859
Chandrayan, Sanjeev Kumar and Guptasarma, Purnananda (2009) Attenuation of ionic interactions profoundly lowers the kinetic thermal stability of Pyrococcus furiosus triosephosphate isomerase. Biochimica et biophysica acta, 1794 (6). pp. 905-12. ISSN 0006-3002
Chatterjee, Sushovan and Barbora, Lepakshi and Cameotra, Swaranjit Singh and Mahanta, Pinakeswar and Goswami, Pranab (2009) Silk-fiber immobilized lipase-catalyzed hydrolysis of emulsified sunflower oil. Applied biochemistry and biotechnology, 157 (3). pp. 593-600. ISSN 1559-0291
Chaudhary, Neelkamal and Mahajan, Lakshna and Madan, Taruna and Kumar, Anil and Raghava, G.P.S. and Katti, Seturam Bandacharya and Haq, Wahajul and Sarma, Puranam Usha (2009) Prophylactic and Therapeutic Potential of Asp f1 Epitopes in Naïve and Sensitized BALB/c Mice. Immune network, 9 (5). pp. 179-91. ISSN 2092-6685
Chauhan, Archana and Islam, Zeyaul and Jain, R K and Karthikeyan, Subramanian (2009) Expression, purification, crystallization and preliminary X-ray analysis of maleylacetate reductase from Burkholderia sp. strain SJ98. Acta crystallographica. Section F, Structural biology and crystallization communications, 65 (Pt 12). pp. 1313-6. ISSN 1744-3091
Chauhan, Jagat S and Mishra, Nitish K and Raghava, G.P.S. (2009) Identification of ATP binding residues of a protein from its primary sequence. BMC bioinformatics, 10. p. 434. ISSN 1471-2105
Dongre, Mitesh (2009) Studies on the mechanism of protease negative phenotype of vibrio cholerae non-01,non-0139 strain. PhD thesis, CSIR-IMTECH, Chandigarh/ Jawaharlal Nehru University, New Delhi: India.
Dubey, Rudra Narayan and Nakwal, Nandni and Bisht, Kamlesh Kumar and Saini, Ashok and Haldar, Swati and Singh, Jagmohan (2009) Interaction of APC/C-E3 ligase with Swi6/HP1 and Clr4/Suv39 in heterochromatin assembly in fission yeast. The Journal of biological chemistry, 284 (11). pp. 7165-76. ISSN 0021-9258
Gandhi, Sonu and Caplash, Neena and Sharma, Prince and Suri, C Raman (2009) Strip-based immunochromatographic assay using specific egg yolk antibodies for rapid detection of morphine in urine samples. Biosensors & bioelectronics, 25 (2). pp. 502-5. ISSN 1873-4235
Garg, Saurabh K and Alam, Md Suhail and Bajpai, Richa and Kishan, K V Radha and Agrawal, Pushpa (2009) Redox biology of Mycobacterium tuberculosis H37Rv: protein-protein interaction between GlgB and WhiB1 involves exchange of thiol-disulfide. BMC biochemistry, 10. p. 1. ISSN 1471-2091
Gowthaman, Uthaman and Agrewala, J N (2009) In silico methods for predicting T-cell epitopes: Dr Jekyll or Mr Hyde? Expert review of proteomics, 6 (5). pp. 527-37. ISSN 1744-8387
Goyal, Deepika and Sahni, Girish and Sahoo, Debendra K (2009) Enhanced production of recombinant streptokinase in Escherichia coli using fed-batch culture. Bioresource technology, 100 (19). pp. 4468-74. ISSN 1873-2976
Gupta, Pawan and Ho, Ping-Chih and Ha, Sung Gil and Lin, Yi-Wei and Wei, Li-Na (2009) HDAC3 as a molecular chaperone for shuttling phosphorylated TR2 to PML: a novel deacetylase activity-independent function of HDAC3. PloS one, 4 (2). e4363. ISSN 1932-6203
Gupta, Sankalp and Pathak, Anuj and Sinha, Akesh and Sarkar, Dibyendu (2009) Mycobacterium tuberculosis PhoP recognizes two adjacent direct-repeat sequences to form head-to-head dimers. Journal of bacteriology, 191 (24). pp. 7466-76. ISSN 1098-5530
Ho, Ping-Chih and Lin, Yi-Wei and Tsui, Yao-Chen and Gupta, Pawan and Wei, Li-Na (2009) A negative regulatory pathway of GLUT4 trafficking in adipocyte: new function of RIP140 in the cytoplasm via AS160. Cell metabolism, 10 (6). pp. 516-23. ISSN 1932-7420
Joshi, Kishore K. (2009) Mechanistic insight into substrate- assisted catalysis by streptokinase. PhD thesis, CSIR-IMTECH, Chandigarh/ Jawaharlal Nehru University, New Delhi: India..
Kalia, S.B. and Kaushal, G. and Kumar(1), Manoj and Cameotra, Swaranjit Singh and Sharma, A. and Verma , M.L. and Kanwar, S.S. (2009) Antimicrobial and toxicological studies of some metal complexes of 4- methylpiperazine-1-carbodithioate and phenanthroline mixed ligands. Brazilian Journal of Microbiology, 40. pp. 916-922. ISSN 1517-8382
Kapoor, Divya (2009) Short-circuiting natural evolution through selected transplantations of residues to engineer the physical behaviour of protein surface. PhD thesis, CSIR-IMTECH, Chandigarh/ Jawaharlal Nehru University, New Delhi: India..
Kapoor, Divya and Singh, Balvinder and Subramanian, Karthikeyan and Guptasarma, Purnananda (2009) Creation of a new eye lens crystallin (Gambeta) through structure-guided mutagenic grafting of the surface of betaB2 crystallin onto the hydrophobic core of gammaB crystallin. The FEBS journal, 276 (12). pp. 3341-53. ISSN 1742-4658
Kastuia, Neha (2009) Genetic studies on the glutamylcysteine synthetase enzyme involved in glutathione biosynthesis in the yeast S. cerevisae. PhD thesis, SIR-IMTECH, Chandigarh/ Jawaharlal Nehru University, New Delhi: India..
Kaundal, Rakesh and Raghava, G.P.S. (2009) RSLpred: an integrative system for predicting subcellular localization of rice proteins combining compositional and evolutionary information. Proteomics, 9 (9). pp. 2324-42. ISSN 1615-9861
Kaur, Hardeep and Kumar, Chitranshu and Junot, Christophe and Toledano, Michel B and Bachhawat, Anand K (2009) Dug1p Is a Cys-Gly peptidase of the gamma-glutamyl cycle of Saccharomyces cerevisiae and represents a novel family of Cys-Gly peptidases. The Journal of biological chemistry, 284 (21). pp. 14493-502. ISSN 0021-9258
Kaur, Jaspreet and Bachhawat, Anand K (2009) Gln-222 in transmembrane domain 4 and Gln-526 in transmembrane domain 9 are critical for substrate recognition in the yeast high affinity glutathione transporter, Hgt1p. The Journal of biological chemistry, 284 (35). pp. 23872-84. ISSN 0021-9258
Kaur, Jaspreet and Bachhawat, Anand K (2009) A modified Western blot protocol for enhanced sensitivity in the detection of a membrane protein. Analytical biochemistry, 384 (2). pp. 348-9. ISSN 1096-0309
Kaur, Jaspreet and Srikanth, Chittur V and Bachhawat, Anand K (2009) Differential roles played by the native cysteine residues of the yeast glutathione transporter, Hgt1p. FEMS yeast research, 9 (6). pp. 849-66. ISSN 1567-1364
Krishnamurthi, S and Bhattacharya, A and Mayilraj, Shanmugam and Saha, Sudipto and Schumann, Peter and Chakrabarti, T (2009) Description of Paenisporosarcina quisquiliarum gen. nov., sp. nov., and reclassification of Sporosarcina macmurdoensis Reddy et al. 2003 as Paenisporosarcina macmurdoensis comb. nov. International journal of systematic and evolutionary microbiology, 59 (Pt 6). pp. 1364-70. ISSN 1466-5026
Krishnamurthi, S and Chakrabarti, T and Stackebrandt, Erko (2009) Re-examination of the taxonomic position of Bacillus silvestris Rheims et al. 1999 and proposal to transfer it to Solibacillus gen. nov. as Solibacillus silvestris comb. nov. International journal of systematic and evolutionary microbiology, 59 (Pt 5). pp. 1054-8. ISSN 1466-5026
Kumar, Ashok (2009) Role of chromatin assembly factor-1 and Pap 1 in gene silencing in schizasachharomyces pombe. PhD thesis, CSIR-IMTECH, Chandigarh/ Jawaharlal Nehru University, New Delhi: India..
Kumar, Manish and Raghava, G.P.S. (2009) Prediction of nuclear proteins using SVM and HMM models. BMC bioinformatics, 10. p. 22. ISSN 1471-2105
Kumar, Shekhar (2009) Studies on concerted structural transitions and protein- protein interactions in plasminogen activation by bacterial plasminogen activator. PhD thesis, CSIR-IMTECH, Chandigarh/ Jawaharlal Nehru University, New Delhi: India..
Kumaran, Sangaralingam and Yi, Hankuil and Krishnan, Hari B and Jez, Joseph M (2009) Assembly of the cysteine synthase complex and the regulatory role of protein-protein interactions. The Journal of biological chemistry, 284 (15). pp. 10268-75. ISSN 0021-9258
Lama, Amrita and Pawaria, Sudesh and Bidon-Chanal, Axel and Anand, Arvind and Gelpí, José Luis and Arya, Swati and Martí, Marcelo and Estrin, Dario A and Luque, F Javier and Dikshit, Kanak L (2009) Role of Pre-A motif in nitric oxide scavenging by truncated hemoglobin, HbN, of Mycobacterium tuberculosis. The Journal of biological chemistry, 284 (21). pp. 14457-68. ISSN 0021-9258
Land, Miriam and Lapidus, Alla and Mayilraj, Shanmugam and Chen, Feng and Copeland, Alex and Del Rio, Tijana Glavina and Nolan, Matt and Lucas, Susan and Tice, Hope and Cheng, Jan-Fang and Chertkov, Olga and Bruce, David and Goodwin, Lynne and Pitluck, Sam and Rohde, Manfred and Göker, Markus and Pati, Amrita and Ivanova, Natalia and Mavromatis, Konstantinos and Chen, Amy and Palaniappan, Krishna and Hauser, Loren and Chang, Yun-Juan and Jeffries, Cynthia C and Brettin, Thomas and Detter, John C and Han, Cliff and Chain, Patrick and Tindall, Brian J and Bristow, Jim and Eisen, Jonathan A and Markowitz, Victor and Hugenholtz, Philip and Kyrpides, Nikos C and Klenk, Hans-Peter (2009) Complete genome sequence of Actinosynnema mirum type strain (101). Standards in genomic sciences, 1 (1). pp. 46-53. ISSN 1944-3277
Lata, Sneh (2009) Bioinformatics approach for searching subunit vaccine candidates and adjuvants. PhD thesis, CSIR-IMTECH, Chandigarh/ Jawaharlal Nehru University, New Delhi: India..
Lata, Sneh and Bhasin, Manoj and Raghava, G.P.S. (2009) MHCBN 4.0: A database of MHC/TAP binding peptides and T-cell epitopes. BMC research notes, 2. p. 61. ISSN 1756-0500
Lata, Sneh and Raghava, G.P.S. (2009) Prediction and classification of chemokines and their receptors. Protein engineering, design & selection : PEDS, 22 (7). pp. 441-4. ISSN 1741-0134
Mannan, M Amin-ul (2009) tudies towards understanding the molecular mechanism of stress tolerance mediated by RPI 1 yeast. PhD thesis, CSIR-IMTECH, Chandigarh/ Jawaharlal Nehru University, New Delhi: India..
Mayilraj, Shanmugam and Kaksonen, Anna H and Cord-Ruwisch, Ralf and Schumann, Peter and Spröer, Cathrin and Tindall, Brian J and Spring, Stefan (2009) Desulfonauticus autotrophicus sp. nov., a novel thermophilic sulfate-reducing bacterium isolated from oil-production water and emended description of the genus Desulfonauticus. Extremophiles : life under extreme conditions, 13 (2). pp. 247-55. ISSN 1433-4909
Meena, Netrapal (2009) Molecular characterization of the putative osmosensors in debaryomyces hansenil. PhD thesis, CSIR-IMTECH, Chandigarh/ Jawaharlal Nehru University, New Delhi: India.
Minhas, Anupriya and Biswas, Dipanwita and Mondal, Alok K (2009) Development of host and vector for high-efficiency transformation and gene disruption in Debaryomyces hansenii. FEMS yeast research, 9 (1). pp. 95-102. ISSN 1567-1364
Moon, Lomary S (2009) New biocatalyst for nitrile hydrolysis and novel chiral solvating agents for NMR enantiodiscrimination of cyanohydrins. PhD thesis, CSIR-IMTECH, Chandigarh/ Jawaharlal Nehru University, New Delhi: India.
Moon, Lomary S and Jolly, R S and Kasetti, Yoganjaneyulu and Bharatam, Prasad V (2009) A new chiral shift reagent for the determination of enantiomeric excess and absolute configuration in cyanohydrins. Chemical communications (Cambridge, England) (9). pp. 1067-9. ISSN 1359-7345
Nangia, Yogesh and Wangoo, Nishima and Goyal, Nisha and Shekhawat, G and Suri, C Raman (2009) A novel bacterial isolate Stenotrophomonas maltophilia as living factory for synthesis of gold nanoparticles. Microbial cell factories, 8. p. 39. ISSN 1475-2859
Newcombe, David and Dekas, Anne and Mayilraj, Shanmugam and Venkateswaran, Kasthuri (2009) Bacillus canaveralius sp. nov., an alkali-tolerant bacterium isolated from a spacecraft assembly facility. International journal of systematic and evolutionary microbiology, 59 (Pt 8). pp. 2015-9. ISSN 1466-5026
Pandey, Janmejay (2009) Molecular and biochemical studies of O-Nitrobenzoate biodegradation and bacterial diversity of a nitroaromatic contaminated site. PhD thesis, CSIR-IMTECH, Chandigarh/ Jawaharlal Nehru University, New Delhi: India..
Pandey, Janmejay and Chauhan, Archana and Jain, R K (2009) Integrative approaches for assessing the ecological sustainability of in situ bioremediation. FEMS microbiology reviews, 33 (2). pp. 324-75. ISSN 1574-6976
Patnaik, Pratap R (2009) Cognitive optimization of microbial PHB production in an optimally dispersed bioreactor by single and mixed cultures. Bioprocess and biosystems engineering, 32 (4). pp. 557-68. ISSN 1615-7605
Patnaik, Pratap R (2009) Transient response analysis of the eukaryotic chemosensory system to intra-cellular fluctuations. Journal of bioinformatics and computational biology, 7 (1). pp. 93-105. ISSN 0219-7200
Puria, Rekha and Mannan, M Amin-ul and Chopra-Dewasthaly, Rohini and Ganesan, K (2009) Critical role of RPI1 in the stress tolerance of yeast during ethanolic fermentation. FEMS yeast research, 9 (8). pp. 1161-71. ISSN 1567-1364
Rajamohan, Govindan and Srinivasan, V B and Gebreyes, Wondwossen A (2009) Biocide-tolerant multidrug-resistant Acinetobacter baumannii clinical strains are associated with higher biofilm formation. The Journal of hospital infection, 73 (3). pp. 287-9. ISSN 1532-2939
Rajpara, Neha and Patel, Arati and Tiwari, Neha and Bahuguna, Jyotsana and Antony, Anita and Choudhury, Ipsita and Ghosh, Anuradha and Jain, R K and Ghosh, Amit and Bhardwaj, Ashima Kushwaha (2009) Mechanism of drug resistance in a clinical isolate of Vibrio fluvialis: involvement of multiple plasmids and integrons. International journal of antimicrobial agents, 34 (3). pp. 220-5. ISSN 1872-7913
Rashid, Mamoon and Singla, Deepak and Sharma, Arun and Kumar, Manish and Raghava, G.P.S. (2009) Hmrbase: a database of hormones and their receptors. BMC genomics, 10. p. 307. ISSN 1471-2164
Rishi, Loveena and Gahlot, Satindra and Kathania, Mahesh and Majumdar, Sekhar (2009) Pentoxifylline induces apoptosis in vitro in cutaneous T cell lymphoma (HuT-78) and enhances FasL mediated killing by upregulating Fas expression. Biochemical pharmacology, 77 (1). pp. 30-45. ISSN 1873-2968
rahman, Fazlur and Batra, M and Pandey, Janmejay and Suri, C Raman and Jain, R K (2009) Isolation and characterization of an atrazine-degrading Rhodococcus sp. strain MB-P1 from contaminated soil. Letters in applied microbiology, 49 (6). pp. 721-9. ISSN 1472-765X
Saluja, Puja (2009) Exploration of yeasts from selected niches of India and study of thermotolerance. PhD thesis, CSIR-IMTECH, Chandigarh/ Jawaharlal Nehru University, New Delhi: India.
Shah, Ashu (2009) Phage display for screening and identifying protein ligand interactions in malaria. PhD thesis, CSIR-IMTECH, Chandigarh/ Jawaharlal Nehru University, New Delhi: India.
Singh, Gaganmeet and Thakur, Meghna and Chakraborti, Pradip K and Dey, Chinmoy S (2009) Evidence for the presence of R250G mutation at the ATPase domain of topoisomerase II in an arsenite-resistant Leishmania donovani exhibiting a differential drug inhibition profile. International journal of antimicrobial agents, 33 (1). pp. 80-5. ISSN 0924-8579
Singh, P. and Dhanjal, Soniya and Singh, K.V. and Suri, C Raman and Cameotra, Swaranjit Singh (2009) Monitoring atrazine uptake by a new fluorometric assay. Current Science, 96 (2). pp. 268-271. ISSN 0011-3891
Srinivasan, V. B. and Rajamohan, Govindan and Gebreyes, Wondwossen A (2009) Role of AbeS, a Novel Efflux Pump of the SMR Family of Transporters, in Resistance to Antimicrobial Agents in Acinetobacter baumannii. Antimicrobial Agents and Chemotherapy, 53 (12). pp. 5312-5316. ISSN 0066-4804
Srinivasan, Vijaya B and Rajamohan, Govindan and Pancholi, Preeti and Stevenson, Kurt and Tadesse, Daniel and Patchanee, Prapas and Marcon, Mario and Gebreyes, Wondwossen A (2009) Genetic relatedness and molecular characterization of multidrug resistant Acinetobacter baumannii isolated in central Ohio, USA. Annals of clinical microbiology and antimicrobials, 8. p. 21. ISSN 1476-0711
Srivastava, Shilpy (2009) Mycobacteria and host cell: Studies on cell envelope components of Mycobacteria. PhD thesis, CSIR-IMTECH, Chandigarh/ Jawaharlal Nehru University, New Delhi: India..
