Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_060501 17 3301 NP_000284 17 4312 NP_001027005 17 4312 XP_005256041 17 4312 XP_005256040 17 4312 NP_003238 16 5631 NP_079335 16 5631 XP_006715631 16 5631 NP_009016 16 7355 NP_001026 15 9605 NP_055968 15 9605 NP_060136 15 9605 NP_061027 15 9605 NP_001277188 15 9605 NP_001167571 15 9605 NP_127503 15 9605 NP_127501 15 9605 NP_065151 15 9605 XP_006724828 15 9605 XP_006715490 15 9605 XP_005248760 15 9605 XP_005248759 15 9605 XP_006715489 15 9605 XP_005248758 15 9605 XP_006713333 15 9605 XP_005265389 15 9605 XP_005265388 15 9605 XP_006713332 15 9605 XP_006713331 15 9605 XP_006713330 15 9605 XP_006713329 15 9605 XP_005265387 15 9605 XP_006711904 15 9605 XP_006711873 15 9605 XP_006711872 15 9605 XP_006711871 15 9605 XP_006711870 15 9605 XP_006711869 15 9605 XP_006711868 15 9605 XP_006711867 15 9605 XP_006711866 15 9605 XP_006711865 15 9605>NP_060501 Length = 1151 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 CLSTSKI 8 CLSTS+I Sbjct: 23 CLSTSRI 29>NP_000284 Length = 1093 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 CLSTSKI 8 CL TSKI Sbjct: 559 CLGTSKI 565>NP_001027005 Length = 1086 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 CLSTSKI 8 CL TSKI Sbjct: 552 CLGTSKI 558>XP_005256041 Length = 1086 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 CLSTSKI 8 CL TSKI Sbjct: 552 CLGTSKI 558>XP_005256040 Length = 1093 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 CLSTSKI 8 CL TSKI Sbjct: 559 CLGTSKI 565>NP_003238 Length = 1172 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CLSTSKI 8 C STSK+ Sbjct: 601 CFSTSKV 607>NP_079335 Length = 715 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 ACLSTSKI 8 A LSTSKI Sbjct: 113 AALSTSKI 120>XP_006715631 Length = 648 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 ACLSTSKI 8 A LSTSKI Sbjct: 113 AALSTSKI 120>NP_009016 Length = 308 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ACLSTSKI 8 ACL+ SKI Sbjct: 83 ACLTGSKI 90>NP_001026 Length = 4967 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 CLSTSK 7 CLSTS+ Sbjct: 132 CLSTSR 137>NP_055968 Length = 2039 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 ACLSTSKI 8 AC STS I Sbjct: 1357 ACASTSHI 1364>NP_060136 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CLSTSKIL 9 C S SK+L Sbjct: 318 CFSCSKVL 325>NP_061027 Length = 4599 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ACLSTSK 7 ACL T+K Sbjct: 83 ACLGTNK 89>NP_001277188 Length = 1951 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 ACLSTSKI 8 AC STS I Sbjct: 1269 ACASTSHI 1276>NP_001167571 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ACLSTSK 7 ACL T+K Sbjct: 307 ACLETAK 313>NP_127503 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ACLSTSK 7 ACL T+K Sbjct: 307 ACLETAK 313>NP_127501 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ACLSTSK 7 ACL T+K Sbjct: 307 ACLETAK 313>NP_065151 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ACLSTSK 7 ACL T+K Sbjct: 264 ACLETAK 270>XP_006724828 Length = 688 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CLSTSKIL 9 C S SK+L Sbjct: 318 CFSCSKVL 325>XP_006715490 Length = 1181 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 ACLSTSKI 8 AC STS I Sbjct: 499 ACASTSHI 506>XP_005248760 Length = 1308 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 ACLSTSKI 8 AC STS I Sbjct: 626 ACASTSHI 633>XP_005248759 Length = 1951 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 ACLSTSKI 8 AC STS I Sbjct: 1269 ACASTSHI 1276>XP_006715489 Length = 2039 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 ACLSTSKI 8 AC STS I Sbjct: 1357 ACASTSHI 1364>XP_005248758 Length = 2039 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 ACLSTSKI 8 AC STS I Sbjct: 1357 ACASTSHI 1364>XP_006713333 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ACLSTSK 7 ACL T+K Sbjct: 264 ACLETAK 270>XP_005265389 Length = 383 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ACLSTSK 7 ACL T+K Sbjct: 287 ACLETAK 293>XP_005265388 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ACLSTSK 7 ACL T+K Sbjct: 307 ACLETAK 313>XP_006713332 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ACLSTSK 7 ACL T+K Sbjct: 307 ACLETAK 313>XP_006713331 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ACLSTSK 7 ACL T+K Sbjct: 307 ACLETAK 313>XP_006713330 Length = 424 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ACLSTSK 7 ACL T+K Sbjct: 328 ACLETAK 334>XP_006713329 Length = 424 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ACLSTSK 7 ACL T+K Sbjct: 328 ACLETAK 334>XP_005265387 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ACLSTSK 7 ACL T+K Sbjct: 330 ACLETAK 336>XP_006711904 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ACLSTSK 7 +CLSTS+ Sbjct: 38 SCLSTSQ 44>XP_006711873 Length = 4954 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 CLSTSK 7 CLSTS+ Sbjct: 132 CLSTSR 137>XP_006711872 Length = 2735 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 CLSTSK 7 CLSTS+ Sbjct: 132 CLSTSR 137>XP_006711871 Length = 4906 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 CLSTSK 7 CLSTS+ Sbjct: 132 CLSTSR 137>XP_006711870 Length = 4965 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 CLSTSK 7 CLSTS+ Sbjct: 132 CLSTSR 137>XP_006711869 Length = 4973 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 CLSTSK 7 CLSTS+ Sbjct: 132 CLSTSR 137>XP_006711868 Length = 4975 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 CLSTSK 7 CLSTS+ Sbjct: 132 CLSTSR 137>XP_006711867 Length = 4977 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 CLSTSK 7 CLSTS+ Sbjct: 132 CLSTSR 137>XP_006711866 Length = 4984 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 CLSTSK 7 CLSTS+ Sbjct: 132 CLSTSR 137>XP_006711865 Length = 4985 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 CLSTSK 7 CLSTS+ Sbjct: 132 CLSTSR 137Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.125 0.348 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 531,394 Number of extensions: 707 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |