Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 18 1482 NP_001035957 18 1482 XP_006721990 18 1482 XP_006721989 18 1482 XP_005258041 18 1482 XP_006721988 18 1482 XP_006721987 18 1482 XP_006721986 18 1482 XP_005258040 18 1482 XP_006721985 18 1482 NP_001005327 17 4312 NP_001005279 16 5631 NP_006412 16 7355 NP_006411 16 7355 XP_006723746 16 7355 XP_005260309 16 7355 XP_006719806 16 7355 XP_006716481 16 7355 XP_005251193 16 7355 XP_005251192 16 7355 XP_005251191 16 7355 NP_002145 15 9605 NP_005637 15 9605 NP_055093 15 9605 NP_722518 15 9605 NP_001166173 15 9605 NP_001399 15 9605 XP_006720113 15 9605 XP_006720112 15 9605 XP_006720111 15 9605 XP_006720110 15 9605 XP_006720109 15 9605 XP_006714203 15 9605 XP_005273291 15 9605 XP_006710468 15 9605 XP_005270637 15 9605>NP_000258 Length = 2818 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ADTAVALA 8 ADTAVALA Sbjct: 2011 ADTAVALA 2018>NP_001035957 Length = 2839 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ADTAVALA 8 ADTAVALA Sbjct: 2032 ADTAVALA 2039>XP_006721990 Length = 2823 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ADTAVALA 8 ADTAVALA Sbjct: 2042 ADTAVALA 2049>XP_006721989 Length = 2823 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ADTAVALA 8 ADTAVALA Sbjct: 2042 ADTAVALA 2049>XP_005258041 Length = 2836 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ADTAVALA 8 ADTAVALA Sbjct: 2011 ADTAVALA 2018>XP_006721988 Length = 2846 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ADTAVALA 8 ADTAVALA Sbjct: 2021 ADTAVALA 2028>XP_006721987 Length = 2849 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ADTAVALA 8 ADTAVALA Sbjct: 2042 ADTAVALA 2049>XP_006721986 Length = 2854 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ADTAVALA 8 ADTAVALA Sbjct: 2029 ADTAVALA 2036>XP_005258040 Length = 2857 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ADTAVALA 8 ADTAVALA Sbjct: 2032 ADTAVALA 2039>XP_006721985 Length = 2867 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ADTAVALA 8 ADTAVALA Sbjct: 2042 ADTAVALA 2049>NP_001005327 Length = 315 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DTAVALAF 9 DTA+AL F Sbjct: 270 DTAIALMF 277>NP_001005279 Length = 324 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DTAVALAF 9 D A+ALAF Sbjct: 272 DIAIALAF 279>NP_006412 Length = 1849 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ADTAVALAF 9 ADTA LA+ Sbjct: 821 ADTAYVLAY 829>NP_006411 Length = 1785 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ADTAVALAF 9 ADTA LA+ Sbjct: 766 ADTAYVLAY 774>XP_006723746 Length = 1177 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ADTAVALAF 9 ADTA LA+ Sbjct: 158 ADTAYVLAY 166>XP_005260309 Length = 1784 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ADTAVALAF 9 ADTA LA+ Sbjct: 765 ADTAYVLAY 773>XP_006719806 Length = 492 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ADTAVALA 8 ADTAVA++ Sbjct: 360 ADTAVAVS 367>XP_006716481 Length = 1649 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ADTAVALAF 9 ADTA LA+ Sbjct: 621 ADTAYVLAY 629>XP_005251193 Length = 1800 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ADTAVALAF 9 ADTA LA+ Sbjct: 821 ADTAYVLAY 829>XP_005251192 Length = 1843 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ADTAVALAF 9 ADTA LA+ Sbjct: 821 ADTAYVLAY 829>XP_005251191 Length = 1849 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ADTAVALAF 9 ADTA LA+ Sbjct: 821 ADTAYVLAY 829>NP_002145 Length = 840 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TAVALAF 9 TAVALA+ Sbjct: 175 TAVALAY 181>NP_005637 Length = 1621 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 ADTAVALA 8 A TAVALA Sbjct: 164 AGTAVALA 171>NP_055093 Length = 839 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TAVALAF 9 TAVALA+ Sbjct: 175 TAVALAY 181>NP_722518 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DTAVALAF 9 +TA+AL+F Sbjct: 286 NTAIALSF 293>NP_001166173 Length = 521 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DTAVALAF 9 +TA+AL+F Sbjct: 286 NTAIALSF 293>NP_001399 Length = 2923 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DTAVALAF 9 DT VAL F Sbjct: 1488 DTGVALRF 1495>XP_006720113 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DTAVALAF 9 +TA+AL+F Sbjct: 85 NTAIALSF 92>XP_006720112 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DTAVALAF 9 +TA+AL+F Sbjct: 286 NTAIALSF 293>XP_006720111 Length = 402 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DTAVALAF 9 +TA+AL+F Sbjct: 232 NTAIALSF 239>XP_006720110 Length = 433 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DTAVALAF 9 +TA+AL+F Sbjct: 263 NTAIALSF 270>XP_006720109 Length = 438 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DTAVALAF 9 +TA+AL+F Sbjct: 268 NTAIALSF 275>XP_006714203 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TAVALAF 9 TAVALA+ Sbjct: 175 TAVALAY 181>XP_005273291 Length = 1620 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 ADTAVALA 8 A TAVALA Sbjct: 164 AGTAVALA 171>XP_006710468 Length = 2916 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DTAVALAF 9 DT VAL F Sbjct: 1488 DTGVALRF 1495>XP_005270637 Length = 2921 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DTAVALAF 9 DT VAL F Sbjct: 1488 DTGVALRF 1495Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.127 0.326 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 264,434 Number of extensions: 302 Number of successful extensions: 36 Number of sequences better than 10000.0: 36 Number of HSP's gapped: 36 Number of HSP's successfully gapped: 36 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |