Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_789765 20 299 NP_001123914 20 299 NP_005334 20 299 NP_004976 20 299 NP_203524 20 299 NP_002515 20 299 XP_006725199 20 299 XP_006719132 20 299 XP_006718280 20 299 NP_001078518 19 869 NP_036351 19 869 NP_001239019 19 869 NP_001170785 19 869 NP_036382 19 869 XP_005247286 19 869 XP_005247285 19 869 NP_001239021 17 2528 NP_001239022 17 2528 NP_001239020 17 2528 NP_055568 17 2528 NP_001170786 17 2528 NP_001096139 17 2528 XP_005271906 17 2528 XP_006718144 17 2528 XP_005271905 17 2528 XP_005271904 17 2528 XP_005271903 17 2528 NP_001035517 16 7355 NP_573439 16 7355 NP_573438 16 7355 NP_001181930 16 7355 NP_005695 16 7355 NP_005317 16 7355 NP_001273178 16 7355 XP_006710336 16 7355 XP_006710335 16 7355 XP_006710334 16 7355 XP_006710333 16 7355 XP_006710332 16 7355 NP_065979 15 9605>NP_789765 Length = 170 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMTDQYMRT 9 AM DQYMRT Sbjct: 66 AMRDQYMRT 74>NP_001123914 Length = 189 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMTDQYMRT 9 AM DQYMRT Sbjct: 66 AMRDQYMRT 74>NP_005334 Length = 189 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMTDQYMRT 9 AM DQYMRT Sbjct: 66 AMRDQYMRT 74>NP_004976 Length = 188 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMTDQYMRT 9 AM DQYMRT Sbjct: 66 AMRDQYMRT 74>NP_203524 Length = 189 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMTDQYMRT 9 AM DQYMRT Sbjct: 66 AMRDQYMRT 74>NP_002515 Length = 189 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMTDQYMRT 9 AM DQYMRT Sbjct: 66 AMRDQYMRT 74>XP_006725199 Length = 170 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMTDQYMRT 9 AM DQYMRT Sbjct: 66 AMRDQYMRT 74>XP_006719132 Length = 189 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMTDQYMRT 9 AM DQYMRT Sbjct: 66 AMRDQYMRT 74>XP_006718280 Length = 170 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AMTDQYMRT 9 AM DQYMRT Sbjct: 66 AMRDQYMRT 74>NP_001078518 Length = 208 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AMTDQYMRT 9 AM +QYMRT Sbjct: 76 AMREQYMRT 84>NP_036351 Length = 208 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AMTDQYMRT 9 AM +QYMRT Sbjct: 76 AMREQYMRT 84>NP_001239019 Length = 208 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AMTDQYMRT 9 AM +QYMRT Sbjct: 76 AMREQYMRT 84>NP_001170785 Length = 169 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AMTDQYMRT 9 AM +QYMRT Sbjct: 42 AMREQYMRT 50>NP_036382 Length = 204 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AMTDQYMRT 9 AM +QYMRT Sbjct: 77 AMREQYMRT 85>XP_005247286 Length = 170 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AMTDQYMRT 9 AM +QYMRT Sbjct: 76 AMREQYMRT 84>XP_005247285 Length = 208 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AMTDQYMRT 9 AM +QYMRT Sbjct: 76 AMREQYMRT 84>NP_001239021 Length = 132 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MTDQYMRT 9 M +QYMRT Sbjct: 1 MREQYMRT 8>NP_001239022 Length = 132 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MTDQYMRT 9 M +QYMRT Sbjct: 1 MREQYMRT 8>NP_001239020 Length = 132 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MTDQYMRT 9 M +QYMRT Sbjct: 1 MREQYMRT 8>NP_055568 Length = 1282 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 MTDQYM 7 MTDQYM Sbjct: 473 MTDQYM 478>NP_001170786 Length = 127 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MTDQYMRT 9 M +QYMRT Sbjct: 1 MREQYMRT 8>NP_001096139 Length = 127 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MTDQYMRT 9 M +QYMRT Sbjct: 1 MREQYMRT 8>XP_005271906 Length = 879 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 MTDQYM 7 MTDQYM Sbjct: 473 MTDQYM 478>XP_006718144 Length = 886 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 MTDQYM 7 MTDQYM Sbjct: 473 MTDQYM 478>XP_005271905 Length = 1219 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 MTDQYM 7 MTDQYM Sbjct: 473 MTDQYM 478>XP_005271904 Length = 1219 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 MTDQYM 7 MTDQYM Sbjct: 410 MTDQYM 415>XP_005271903 Length = 1282 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 MTDQYM 7 MTDQYM Sbjct: 473 MTDQYM 478>NP_001035517 Length = 260 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 AMTDQYM 7 A+TD YM Sbjct: 8 ALTDNYM 14>NP_573439 Length = 1436 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AMTDQYMRT 9 A+TD Y R+ Sbjct: 1226 ALTDSYTRS 1234>NP_573438 Length = 1440 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AMTDQYMRT 9 A+TD Y R+ Sbjct: 1232 ALTDSYTRS 1240>NP_001181930 Length = 1433 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AMTDQYMRT 9 A+TD Y R+ Sbjct: 1223 ALTDSYTRS 1231>NP_005695 Length = 1446 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AMTDQYMRT 9 A+TD Y R+ Sbjct: 1236 ALTDSYTRS 1244>NP_005317 Length = 308 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 AMTDQYM 7 A+TD YM Sbjct: 56 ALTDNYM 62>NP_001273178 Length = 236 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 AMTDQYM 7 A+TD YM Sbjct: 56 ALTDNYM 62>XP_006710336 Length = 1177 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AMTDQYMRT 9 A+TD Y R+ Sbjct: 967 ALTDSYTRS 975>XP_006710335 Length = 1370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AMTDQYMRT 9 A+TD Y R+ Sbjct: 1160 ALTDSYTRS 1168>XP_006710334 Length = 1292 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AMTDQYMRT 9 A+TD Y R+ Sbjct: 1082 ALTDSYTRS 1090>XP_006710333 Length = 1439 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AMTDQYMRT 9 A+TD Y R+ Sbjct: 1229 ALTDSYTRS 1237>XP_006710332 Length = 1442 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AMTDQYMRT 9 A+TD Y R+ Sbjct: 1232 ALTDSYTRS 1240>NP_065979 Length = 1215 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 AMTDQY 6 AMTD+Y Sbjct: 432 AMTDKY 437Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.120 0.333 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 424,019 Number of extensions: 509 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |