Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_000042                                                              24      27
XP_006718908                                                           24      27
XP_005271621                                                           24      27
XP_006718907                                                           24      27
XP_006718906                                                           24      27
XP_005271619                                                           24      27
XP_005271618                                                           24      27
NP_877963                                                              19     869
NP_002651                                                              19     869
XP_005260495                                                           19     869
NP_002900                                                              18    1135
NP_001230715                                                           18    1135
NP_000527                                                              18    1135
NP_001230714                                                           18    1135
XP_005244824                                                           18    1935
NP_005742                                                              17    2528
NP_671714                                                              17    2528
NP_115543                                                              17    2528
NP_001118230                                                           17    2528
NP_079410                                                              17    2528
NP_055921                                                              17    2528
NP_078942                                                              17    2528
NP_000220                                                              17    2528
XP_006721512                                                           17    2528
XP_006721511                                                           17    2528
XP_005256233                                                           17    2528
XP_005256232                                                           17    2528
XP_005256231                                                           17    2528
XP_005256229                                                           17    2528
XP_005256228                                                           17    2528
XP_005256227                                                           17    2528
XP_006721346                                                           17    2528
XP_005256226                                                           17    2528
XP_006721345                                                           17    2528
XP_006721344                                                           17    2528
XP_006721343                                                           17    2528
XP_005256225                                                           17    2528
XP_006721041                                                           17    2528
XP_006721040                                                           17    2528
XP_005255739                                                           17    2528
XP_006720746                                                           17    2528
XP_005254721                                                           17    2528
XP_006715890                                                           17    2528
XP_005250160                                                           17    2528
XP_005250159                                                           17    2528
XP_006713125                                                           17    2528
XP_006713124                                                           17    2528
NP_001273304                                                           17    3301
NP_000878                                                              17    3301
NP_005344                                                              17    3301
NP_006558                                                              17    3301
XP_005248868                                                           17    3301
XP_005248869                                                           17    3301
NP_055448                                                              17    3301
NP_001243514                                                           17    4312
NP_001003794                                                           17    4312
NP_009214                                                              17    4312
NP_001139                                                              17    4312
NP_001129175                                                           17    4312
NP_038465                                                              17    4312
NP_055742                                                              17    4312
NP_001162118                                                           17    4312
NP_056483                                                              17    4312
NP_001162119                                                           17    4312
NP_001162120                                                           17    4312
NP_004885                                                              17    4312
NP_057218                                                              17    4312
NP_001273622                                                           17    4312
NP_689632                                                              17    4312
NP_001273621                                                           17    4312
XP_005274526                                                           17    4312
XP_005274525                                                           17    4312
XP_006721165                                                           17    4312
XP_006716603                                                           17    4312
XP_005250915                                                           17    4312
XP_005250914                                                           17    4312
XP_005250812                                                           17    4312
XP_005273469                                                           17    4312
XP_005273468                                                           17    4312
XP_005273467                                                           17    4312
XP_005273466                                                           17    4312
XP_006714257                                                           17    4312
XP_005263002                                                           17    4312
XP_005262999                                                           17    4312
XP_006714252                                                           17    4312
XP_006714251                                                           17    4312
XP_006714250                                                           17    4312
XP_005247151                                                           17    4312
XP_005247150                                                           17    4312
NP_001120865                                                           17    4312
NP_060898                                                              16    5631
NP_478136                                                              16    5631
NP_001275716                                                           16    5631
NP_775859                                                              16    5631
NP_001275715                                                           16    5631
NP_001275718                                                           16    5631
NP_060124                                                              16    5631
NP_037522                                                              16    5631
NP_001121902                                                           16    5631
NP_060903                                                              16    5631
NP_001140160                                                           16    5631
NP_680482                                                              16    5631
NP_001121901                                                           16    5631
NP_054704                                                              16    5631
NP_054703                                                              16    5631
NP_054702                                                              16    5631
NP_001076437                                                           16    5631
NP_001273142                                                           16    5631
NP_001273141                                                           16    5631
NP_115632                                                              16    5631
NP_003173                                                              16    5631
NP_064544                                                              16    5631
NP_001241878                                                           16    5631
NP_001028723                                                           16    5631
NP_001138392                                                           16    5631
NP_079202                                                              16    5631
NP_001274441                                                           16    5631
NP_001180236                                                           16    5631
XP_005256523                                                           16    5631
XP_005256519                                                           16    5631
XP_006721515                                                           16    5631
XP_005256518                                                           16    5631
XP_006717096                                                           16    5631
XP_005251926                                                           16    5631
XP_006716198                                                           16    5631
XP_006714339                                                           16    5631
XP_006714338                                                           16    5631
NP_839943                                                              16    5631
NP_000713                                                              16    7355
NP_075561                                                              16    7355
NP_996991                                                              16    7355
NP_001273093                                                           16    7355
NP_004310                                                              16    7355
NP_001243411                                                           16    7355
NP_001970                                                              16    7355
NP_001243413                                                           16    7355
NP_775766                                                              16    7355
NP_689856                                                              16    7355
NP_001186978                                                           16    7355
NP_001020029                                                           16    7355
NP_008877                                                              16    7355
NP_085095                                                              16    7355
NP_085080                                                              16    7355
NP_003824                                                              16    7355
NP_060691                                                              16    7355
NP_000338                                                              16    7355
NP_003119                                                              16    7355
NP_005015                                                              16    7355
XP_006725230                                                           16    7355
XP_005260656                                                           16    7355
XP_005260655                                                           16    7355
XP_005260654                                                           16    7355
XP_006720304                                                           16    7355
XP_005268080                                                           16    7355
XP_006720283                                                           16    7355
XP_005274250                                                           16    7355
XP_006718734                                                           16    7355
XP_006718733                                                           16    7355
XP_005274249                                                           16    7355
XP_006718732                                                           16    7355
XP_006716184                                                           16    7355
XP_006716183                                                           16    7355
XP_005250631                                                           16    7355
XP_005250630                                                           16    7355
XP_006716182                                                           16    7355
XP_005250629                                                           16    7355
XP_005250627                                                           16    7355
XP_006716181                                                           16    7355
XP_005248410                                                           16    7355
XP_006714553                                                           16    7355
XP_005248407                                                           16    7355
XP_005248406                                                           16    7355
XP_005248404                                                           16    7355
XP_005248403                                                           16    7355
XP_006714552                                                           16    7355
XP_005248402                                                           16    7355
XP_005264575                                                           16    7355
XP_006712150                                                           16    7355
XP_005264574                                                           16    7355
NP_065869                                                              16    7355
NP_842565                                                              16    7355
NP_001001913                                                           16    7355
NP_066933                                                              15    9605
NP_036428                                                              15    9605
NP_536739                                                              15    9605
NP_115787                                                              15    9605
NP_001231696                                                           15    9605
NP_775739                                                              15    9605
NP_001231695                                                           15    9605
NP_115523                                                              15    9605
NP_001035862                                                           15    9605
NP_031387                                                              15    9605
NP_001269461                                                           15    9605
NP_056154                                                              15    9605
NP_001269460                                                           15    9605
NP_001265322                                                           15    9605
NP_000493                                                              15    9605
NP_848651                                                              15    9605
NP_001128647                                                           15    9605
NP_690869                                                              15    9605
NP_056017                                                              15    9605
NP_055865                                                              15    9605
NP_001188358                                                           15    9605
NP_036427                                                              15    9605
NP_001186210                                                           15    9605
NP_006142                                                              15    9605
NP_003117                                                              15    9605
NP_066015                                                              15    9605
NP_001153574                                                           15    9605
NP_778228                                                              15    9605
NP_852107                                                              15    9605
XP_006724247                                                           15    9605
XP_006724246                                                           15    9605
XP_006724245                                                           15    9605
XP_006724244                                                           15    9605
XP_006724243                                                           15    9605
XP_005261477                                                           15    9605
XP_005261476                                                           15    9605
XP_005261474                                                          

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package