Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_055365 21 175 XP_005271970 17 3301 NP_001193934 17 4312 NP_861421 17 4312 NP_006506 16 5631 NP_001263254 16 5631 XP_006713359 16 5631 NP_001025006 16 7355 NP_113631 16 7355 NP_001161407 16 7355 NP_001161406 16 7355 NP_997698 16 7355 NP_001597 16 7355 XP_005253558 16 7355 XP_006719219 16 7355 XP_005253556 16 7355 XP_005253555 16 7355 XP_006717059 16 7355 XP_006715849 16 7355 XP_006715848 16 7355 NP_009109 15 9605 NP_001273167 15 9605 NP_001276062 15 9605 NP_061946 15 9605 NP_001273168 15 9605 NP_001002860 15 9605 NP_001107644 15 9605 NP_001107604 15 9605 NP_001027545 15 9605 NP_003620 15 9605 XP_006725229 15 9605 XP_005259285 15 9605 XP_006723432 15 9605 XP_006723431 15 9605 XP_005259284 15 9605 XP_006723430 15 9605 XP_005259283 15 9605 XP_005259282 15 9605 XP_005259281 15 9605 XP_006720258 15 9605 XP_005253351 15 9605 XP_006712765 15 9605 XP_006712764 15 9605 XP_005246844 15 9605 XP_006712763 15 9605 XP_006712762 15 9605 XP_006712761 15 9605 XP_005271347 15 9605 XP_006710764 15 9605 XP_006710762 15 9605 XP_005271005 15 9605 NP_001027544 15 9605>NP_055365 Length = 1032 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DENYMITMR 9 DENYMI MR Sbjct: 204 DENYMIAMR 212>XP_005271970 Length = 2931 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 NYMITMR 9 NYMIT R Sbjct: 2906 NYMITFR 2912>NP_001193934 Length = 670 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DENYMITMR 9 DENY+I ++ Sbjct: 154 DENYVIKLQ 162>NP_861421 Length = 670 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DENYMITMR 9 DENY+I ++ Sbjct: 154 DENYVIKLQ 162>NP_006506 Length = 684 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DENYMITMR 9 D NY+I +R Sbjct: 189 DSNYIIAIR 197>NP_001263254 Length = 365 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DENYMITMR 9 D NY+I +R Sbjct: 189 DSNYIIAIR 197>XP_006713359 Length = 370 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DENYMITMR 9 D NY+I +R Sbjct: 189 DSNYIIAIR 197>NP_001025006 Length = 465 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ENYMITMR 9 ++YM+T+R Sbjct: 321 QDYMLTLR 328>NP_113631 Length = 444 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ENYMITMR 9 ++YM+T+R Sbjct: 300 QDYMLTLR 307>NP_001161407 Length = 353 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ENYMITMR 9 ++YM+T+R Sbjct: 209 QDYMLTLR 216>NP_001161406 Length = 386 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ENYMITMR 9 ++YM+T+R Sbjct: 242 QDYMLTLR 249>NP_997698 Length = 2466 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ENYMITMR 9 + YMIT+R Sbjct: 2309 DGYMITVR 2316>NP_001597 Length = 2436 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ENYMITMR 9 + YMIT+R Sbjct: 2279 DGYMITVR 2286>XP_005253558 Length = 897 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DENYMITMR 9 + N+++TMR Sbjct: 251 NRNFLLTMR 259>XP_006719219 Length = 910 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DENYMITMR 9 + N+++TMR Sbjct: 320 NRNFLLTMR 328>XP_005253556 Length = 944 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DENYMITMR 9 + N+++TMR Sbjct: 320 NRNFLLTMR 328>XP_005253555 Length = 966 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DENYMITMR 9 + N+++TMR Sbjct: 320 NRNFLLTMR 328>XP_006717059 Length = 2435 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ENYMITMR 9 + YMIT+R Sbjct: 2278 DGYMITVR 2285>XP_006715849 Length = 374 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ENYMITMR 9 ++YM+T+R Sbjct: 230 QDYMLTLR 237>XP_006715848 Length = 407 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ENYMITMR 9 ++YM+T+R Sbjct: 263 QDYMLTLR 270>NP_009109 Length = 350 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 DENYMIT 7 D NY++T Sbjct: 111 DSNYLLT 117>NP_001273167 Length = 472 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DENYMITMR 9 D N +TMR Sbjct: 121 DSNRQVTMR 129>NP_001276062 Length = 781 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DENYMITMR 9 DE+ ++TMR Sbjct: 369 DESPLLTMR 377>NP_061946 Length = 488 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DENYMITMR 9 D N +TMR Sbjct: 121 DSNRQVTMR 129>NP_001273168 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DENYMITMR 9 D N +TMR Sbjct: 107 DSNRQVTMR 115>NP_001002860 Length = 1132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DENYMITMR 9 DE+ ++TMR Sbjct: 720 DESPLLTMR 728>NP_001107644 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 DENYMI 6 DENY I Sbjct: 338 DENYFI 343>NP_001107604 Length = 2694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NYMITM 8 NY+ITM Sbjct: 117 NYVITM 122>NP_001027545 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 DENYMI 6 DENY++ Sbjct: 145 DENYIV 150>NP_003620 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 DENYMI 6 DENY I Sbjct: 338 DENYFI 343>XP_006725229 Length = 1132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DENYMITMR 9 DE+ ++TMR Sbjct: 720 DESPLLTMR 728>XP_005259285 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 DENYMI 6 DENY++ Sbjct: 145 DENYIV 150>XP_006723432 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 DENYMI 6 DENY++ Sbjct: 145 DENYIV 150>XP_006723431 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 DENYMI 6 DENY++ Sbjct: 145 DENYIV 150>XP_005259284 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 DENYMI 6 DENY++ Sbjct: 145 DENYIV 150>XP_006723430 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 DENYMI 6 DENY++ Sbjct: 145 DENYIV 150>XP_005259283 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 DENYMI 6 DENY++ Sbjct: 145 DENYIV 150>XP_005259282 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 DENYMI 6 DENY++ Sbjct: 145 DENYIV 150>XP_005259281 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 DENYMI 6 DENY++ Sbjct: 145 DENYIV 150>XP_006720258 Length = 1132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DENYMITMR 9 DE+ ++TMR Sbjct: 720 DESPLLTMR 728>XP_005253351 Length = 256 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 DENYMIT 7 D NY++T Sbjct: 17 DSNYLLT 23>XP_006712765 Length = 2679 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NYMITM 8 NY+ITM Sbjct: 117 NYVITM 122>XP_006712764 Length = 2697 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NYMITM 8 NY+ITM Sbjct: 117 NYVITM 122>XP_005246844 Length = 2707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NYMITM 8 NY+ITM Sbjct: 117 NYVITM 122>XP_006712763 Length = 2716 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NYMITM 8 NY+ITM Sbjct: 117 NYVITM 122>XP_006712762 Length = 2723 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NYMITM 8 NY+ITM Sbjct: 117 NYVITM 122>XP_006712761 Length = 2736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NYMITM 8 NY+ITM Sbjct: 117 NYVITM 122>XP_005271347 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 DENYMI 6 DENY I Sbjct: 355 DENYFI 360>XP_006710764 Length = 318 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DENYMITMR 9 D N +TMR Sbjct: 121 DSNRQVTMR 129>XP_006710762 Length = 436 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DENYMITMR 9 D N +TMR Sbjct: 121 DSNRQVTMR 129>XP_005271005 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DENYMITMR 9 D N +TMR Sbjct: 121 DSNRQVTMR 129>NP_001027544 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 DENYMI 6 DENY++ Sbjct: 145 DENYIV 150Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.133 0.374 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 477,488 Number of extensions: 733 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |