Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 17 2528 NP_671714 17 2528 XP_006715890 17 2528 XP_005250160 17 2528 XP_005250159 17 2528 NP_065969 16 5631 NP_001231878 16 5631 NP_001177875 16 5631 XP_005270057 16 5631 XP_005270056 16 5631 XP_005270055 16 5631 XP_006714948 16 5631 XP_006714947 16 5631 XP_006714946 16 5631 XP_006714944 16 5631 XP_006714943 16 5631 XP_006714942 16 5631 XP_006714941 16 5631 XP_006714940 16 5631 XP_006714939 16 5631 XP_006714938 16 5631 NP_006653 16 7355 NP_056329 16 7355 NP_001036100 16 7355 NP_002109 16 7355 NP_659425 15 9605 NP_001184033 15 9605 NP_005924 15 9605 NP_003310 15 9605 NP_597676 15 9605 NP_001243779 15 9605 NP_596869 15 9605 XP_005246888 15 9605 XP_006712788 15 9605 XP_006712787 15 9605 XP_006712786 15 9605 NP_001254479 15 9605 NP_597681 15 9605>NP_005742 Length = 3907 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DISALTLGI 9 DISALTL I Sbjct: 2600 DISALTLRI 2608>NP_671714 Length = 3899 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DISALTLGI 9 DISALTL I Sbjct: 2592 DISALTLRI 2600>XP_006715890 Length = 3860 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DISALTLGI 9 DISALTL I Sbjct: 2553 DISALTLRI 2561>XP_005250160 Length = 3939 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DISALTLGI 9 DISALTL I Sbjct: 2632 DISALTLRI 2640>XP_005250159 Length = 3952 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DISALTLGI 9 DISALTL I Sbjct: 2645 DISALTLRI 2653>NP_065969 Length = 828 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 DISALTLG 8 D SALTLG Sbjct: 2 DESALTLG 9>NP_001231878 Length = 828 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 DISALTLG 8 D SALTLG Sbjct: 2 DESALTLG 9>NP_001177875 Length = 822 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DISALTLG 8 D+S LTLG Sbjct: 533 DLSPLTLG 540>XP_005270057 Length = 599 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 DISALTLG 8 D SALTLG Sbjct: 2 DESALTLG 9>XP_005270056 Length = 789 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 DISALTLG 8 D SALTLG Sbjct: 2 DESALTLG 9>XP_005270055 Length = 828 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 DISALTLG 8 D SALTLG Sbjct: 2 DESALTLG 9>XP_006714948 Length = 448 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DISALTLG 8 D+S LTLG Sbjct: 159 DLSPLTLG 166>XP_006714947 Length = 448 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DISALTLG 8 D+S LTLG Sbjct: 159 DLSPLTLG 166>XP_006714946 Length = 448 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DISALTLG 8 D+S LTLG Sbjct: 159 DLSPLTLG 166>XP_006714944 Length = 586 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DISALTLG 8 D+S LTLG Sbjct: 297 DLSPLTLG 304>XP_006714943 Length = 789 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DISALTLG 8 D+S LTLG Sbjct: 500 DLSPLTLG 507>XP_006714942 Length = 789 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DISALTLG 8 D+S LTLG Sbjct: 500 DLSPLTLG 507>XP_006714941 Length = 789 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DISALTLG 8 D+S LTLG Sbjct: 500 DLSPLTLG 507>XP_006714940 Length = 789 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DISALTLG 8 D+S LTLG Sbjct: 500 DLSPLTLG 507>XP_006714939 Length = 789 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DISALTLG 8 D+S LTLG Sbjct: 500 DLSPLTLG 507>XP_006714938 Length = 902 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DISALTLG 8 D+S LTLG Sbjct: 613 DLSPLTLG 620>NP_006653 Length = 3230 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SALTLGI 9 SALTLG+ Sbjct: 1503 SALTLGL 1509>NP_056329 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 DISALTLG 8 DISALT G Sbjct: 277 DISALTGG 284>NP_001036100 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 DISALTLG 8 DISALT G Sbjct: 277 DISALTGG 284>NP_002109 Length = 263 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ISALTLGI 9 +SA+TLG+ Sbjct: 221 VSAVTLGL 228>NP_659425 Length = 216 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ISALTLGI 9 +SAL LGI Sbjct: 154 VSALLLGI 161>NP_001184033 Length = 3972 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 DISALTLG 8 DI+++TLG Sbjct: 944 DITSVTLG 951>NP_005924 Length = 3969 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 DISALTLG 8 DI+++TLG Sbjct: 944 DITSVTLG 951>NP_003310 Length = 26926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ISALTLGI 9 I A+TLG+ Sbjct: 9874 IKAMTLGV 9881>NP_597676 Length = 27051 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ISALTLGI 9 I A+TLG+ Sbjct: 9999 IKAMTLGV 10006>NP_001243779 Length = 34350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ISALTLGI 9 I A+TLG+ Sbjct: 17298 IKAMTLGV 17305>NP_596869 Length = 33423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ISALTLGI 9 I A+TLG+ Sbjct: 16371 IKAMTLGV 16378>XP_005246888 Length = 22663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ISALTLGI 9 I A+TLG+ Sbjct: 5611 IKAMTLGV 5618>XP_006712788 Length = 24022 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ISALTLGI 9 I A+TLG+ Sbjct: 6970 IKAMTLGV 6977>XP_006712787 Length = 33978 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ISALTLGI 9 I A+TLG+ Sbjct: 16926 IKAMTLGV 16933>XP_006712786 Length = 35484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ISALTLGI 9 I A+TLG+ Sbjct: 18432 IKAMTLGV 18439>NP_001254479 Length = 35991 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ISALTLGI 9 I A+TLG+ Sbjct: 18939 IKAMTLGV 18946>NP_597681 Length = 27118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ISALTLGI 9 I A+TLG+ Sbjct: 10066 IKAMTLGV 10073Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.144 0.367 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 330,983 Number of extensions: 486 Number of successful extensions: 38 Number of sequences better than 10000.0: 38 Number of HSP's gapped: 38 Number of HSP's successfully gapped: 38 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |