Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_005742                                                              19     869
NP_671714                                                              19     869
XP_006715890                                                           19     869
XP_005250160                                                           19     869
XP_005250159                                                           19     869
NP_001191439                                                           17    2528
NP_055426                                                              17    2528
XP_005248757                                                           17    2528
XP_006715468                                                           17    2528
XP_005248756                                                           17    2528
XP_006715467                                                           17    2528
NP_055733                                                              17    3301
NP_001136357                                                           16    5631
NP_055363                                                              16    5631
NP_612440                                                              16    5631
NP_001185773                                                           16    7355
NP_001265230                                                           16    7355
NP_001073917                                                           16    7355
XP_005268810                                                           16    7355
XP_005268809                                                           16    7355
XP_006713655                                                           16    7355
NP_036416                                                              16    7355
NP_001140174                                                           15    9605
NP_004178                                                              15    9605
NP_001269551                                                           15    9605
NP_001273063                                                           15    9605
NP_068751                                                              15    9605
NP_002499                                                              15    9605
XP_006724672                                                           15    9605
XP_005262092                                                           15    9605
XP_006718333                                                           15    9605
XP_005253109                                                           15    9605
XP_006711834                                                           15    9605
>NP_005742
          Length = 3907

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   DTTELMGKL 9
           DTTELM KL
Sbjct: 937 DTTELMEKL 945
>NP_671714
          Length = 3899

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   DTTELMGKL 9
           DTTELM KL
Sbjct: 937 DTTELMEKL 945
>XP_006715890
          Length = 3860

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   DTTELMGKL 9
           DTTELM KL
Sbjct: 937 DTTELMEKL 945
>XP_005250160
          Length = 3939

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   DTTELMGKL 9
           DTTELM KL
Sbjct: 937 DTTELMEKL 945
>XP_005250159
          Length = 3952

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   DTTELMGKL 9
           DTTELM KL
Sbjct: 937 DTTELMEKL 945
>NP_001191439
          Length = 347

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   TTELMGKL 9
           TT+L+GKL
Sbjct: 328 TTDLLGKL 335
>NP_055426
          Length = 5596

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1    DTTELMG 7
            DTTEL+G
Sbjct: 2097 DTTELLG 2103
>XP_005248757
          Length = 3591

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1  DTTELMG 7
          DTTEL+G
Sbjct: 92 DTTELLG 98
>XP_006715468
          Length = 3744

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   DTTELMG 7
           DTTEL+G
Sbjct: 245 DTTELLG 251
>XP_005248756
          Length = 3905

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   DTTELMG 7
           DTTEL+G
Sbjct: 406 DTTELLG 412
>XP_006715467
          Length = 5550

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1    DTTELMG 7
            DTTEL+G
Sbjct: 2097 DTTELLG 2103
>NP_055733
          Length = 802

 Score = 16.9 bits (32), Expect =  3301
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2   TTELMGKL 9
           TTE MGKL
Sbjct: 203 TTEEMGKL 210
>NP_001136357
          Length = 315

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  DTTELMGKL 9
          D  EL+GKL
Sbjct: 16 DEDELLGKL 24
>NP_055363
          Length = 351

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  DTTELMGKL 9
          D  EL+GKL
Sbjct: 16 DEDELLGKL 24
>NP_612440
          Length = 412

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   TTELMGKL 9
           T EL+GKL
Sbjct: 364 TLELLGKL 371
>NP_001185773
          Length = 173

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   DTTELMGKL 9
           D TE  GK+
Sbjct: 132 DNTEFQGKI 140
>NP_001265230
          Length = 379

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   DTTELMGKL 9
           DTT ++G+L
Sbjct: 133 DTTTVLGEL 141
>NP_001073917
          Length = 1130

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   DTTELMGKL 9
           DTT ++G+L
Sbjct: 133 DTTTVLGEL 141
>XP_005268810
          Length = 1005

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   DTTELMGKL 9
           DTTEL+  L
Sbjct: 475 DTTELLQSL 483
>XP_005268809
          Length = 1023

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   DTTELMGKL 9
           DTTEL+  L
Sbjct: 493 DTTELLQSL 501
>XP_006713655
          Length = 1146

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   DTTELMGKL 9
           DTT ++G+L
Sbjct: 133 DTTTVLGEL 141
>NP_036416
          Length = 1083

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   DTTELMGKL 9
           DTTEL+  L
Sbjct: 553 DTTELLQSL 561
>NP_001140174
          Length = 1379

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    DTTELMGKL 9
            D T L+G+L
Sbjct: 1233 DVTALLGRL 1241
>NP_004178
          Length = 1560

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    DTTELMGKL 9
            D T L+G+L
Sbjct: 1300 DVTALLGRL 1308
>NP_001269551
          Length = 1559

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    DTTELMGKL 9
            D T L+G+L
Sbjct: 1299 DVTALLGRL 1307
>NP_001273063
          Length = 531

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   DTTELMG 7
           D+TE MG
Sbjct: 298 DSTEFMG 304
>NP_068751
          Length = 537

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   DTTELMG 7
           D+TE MG
Sbjct: 298 DSTEFMG 304
>NP_002499
          Length = 1247

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   DTTELMGKL 9
           DTT+ +GK+
Sbjct: 112 DTTDGLGKV 120
>XP_006724672
          Length = 1446

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    DTTELMGKL 9
            D T L+G+L
Sbjct: 1300 DVTALLGRL 1308
>XP_005262092
          Length = 1557

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    DTTELMGKL 9
            D T L+G+L
Sbjct: 1300 DVTALLGRL 1308
>XP_006718333
          Length = 421

 Score = 15.4 bits

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