Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_003290                                                              20     509
NP_003702                                                              18    1482
NP_795714                                                              18    1482
XP_006714787                                                           18    1482
NP_110389                                                              18    1935
NP_060288                                                              18    1935
NP_001245330                                                           18    1935
NP_001035049                                                           18    1935
NP_001245331                                                           18    1935
NP_064612                                                              18    1935
NP_001245332                                                           18    1935
NP_001254544                                                           18    1935
XP_006719763                                                           18    1935
XP_005244812                                                           18    1935
XP_005244811                                                           18    1935
NP_001186930                                                           17    3301
NP_077719                                                              17    3301
NP_775846                                                              17    3301
NP_079120                                                              17    3301
NP_001072                                                              17    3301
XP_005257750                                                           17    3301
XP_005257747                                                           17    3301
XP_006722157                                                           17    3301
XP_006717844                                                           17    3301
XP_005270959                                                           17    3301
XP_005270958                                                           17    3301
XP_006710730                                                           17    3301
NP_060871                                                              17    4312
NP_061893                                                              17    4312
NP_612373                                                              17    4312
NP_005440                                                              17    4312
NP_001180267                                                           17    4312
NP_001258773                                                           17    4312
NP_001258774                                                           17    4312
XP_005257107                                                           17    4312
XP_006721757                                                           17    4312
XP_005257106                                                           17    4312
XP_005263397                                                           17    4312
XP_005263396                                                           17    4312
XP_005263395                                                           17    4312
XP_006713956                                                           17    4312
XP_005273408                                                           17    4312
NP_001157030                                                           16    5631
NP_000939                                                              16    5631
NP_001136272                                                           16    5631
NP_001129175                                                           16    5631
NP_038465                                                              16    5631
NP_055656                                                              16    5631
NP_005899                                                              16    5631
NP_003911                                                              16    5631
NP_001229721                                                           16    5631
NP_001265467                                                           16    5631
NP_001229723                                                           16    5631
NP_001229722                                                           16    5631
NP_001243647                                                           16    5631
NP_001243646                                                           16    5631
NP_002193                                                              16    5631
NP_056251                                                              16    5631
NP_001009922                                                           16    5631
XP_006715684                                                           16    5631
XP_006715683                                                           16    5631
XP_006715682                                                           16    5631
XP_006715681                                                           16    5631
XP_006715680                                                           16    5631
XP_006715679                                                           16    5631
XP_006715678                                                           16    5631
XP_005248827                                                           16    5631
XP_006714237                                                           16    5631
NP_037490                                                              16    5631
NP_005302                                                              16    7355
NP_001001550                                                           16    7355
NP_001001555                                                           16    7355
NP_004420                                                              16    7355
NP_001177835                                                           16    7355
NP_005980                                                              16    7355
NP_001177836                                                           16    7355
NP_001018098                                                           16    7355
NP_060154                                                              16    7355
NP_060550                                                              16    7355
NP_001229338                                                           16    7355
NP_065872                                                              16    7355
NP_073576                                                              16    7355
NP_009061                                                              16    7355
NP_149095                                                              16    7355
NP_001243359                                                           16    7355
NP_789784                                                              16    7355
NP_659424                                                              16    7355
NP_001186776                                                           16    7355
NP_001073880                                                           16    7355
NP_001035515                                                           16    7355
NP_067043                                                              16    7355
NP_073588                                                              16    7355
NP_001193856                                                           16    7355
NP_004552                                                              16    7355
NP_065162                                                              16    7355
NP_851994                                                              16    7355
XP_005272725                                                           16    7355
XP_005272726                                                           16    7355
XP_006724621                                                           16    7355
XP_005272723                                                           16    7355
XP_006724620                                                           16    7355
XP_005272722                                                           16    7355
XP_006724619                                                           16    7355
XP_006724618                                                           16    7355
XP_006724617                                                           16    7355
XP_006724616                                                           16    7355
XP_006724615                                                           16    7355
XP_006724614                                                           16    7355
XP_006724613                                                           16    7355
XP_005260840                                                           16    7355
XP_006722724                                                           16    7355
XP_005259839                                                           16    7355
XP_006722723                                                           16    7355
XP_006722722                                                           16    7355
XP_005257642                                                           16    7355
XP_006720344                                                           16    7355
XP_006720343                                                           16    7355
XP_006720342                                                           16    7355
XP_005274075                                                           16    7355
XP_005274074                                                           16    7355
XP_006716125                                                           16    7355
XP_006716124                                                           16    7355
XP_005250564                                                           16    7355
XP_005250238                                                           16    7355
XP_005250236                                                           16    7355
XP_006715932                                                           16    7355
XP_006715931                                                           16    7355
XP_006715930                                                           16    7355
XP_005271824                                                           16    7355
XP_006715768                                                           16    7355
XP_005271823                                                           16    7355
XP_005271822                                                           16    7355
XP_006715767                                                           16    7355
XP_006715766                                                           16    7355
XP_005271818                                                           16    7355
XP_005271817                                                           16    7355
XP_006715067                                                           16    7355
XP_005247225                                                           16    7355
XP_005247224                                                           16    7355
NP_700359                                                              16    7355
NP_997218                                                              16    7355
NP_598377                                                              16    7355
NP_057658                                                              15    9605
NP_000786                                                              15    9605
NP_940867                                                              15    9605
NP_612355                                                              15    9605
NP_001008938                                                           15    9605
NP_009068                                                              15    9605
NP_001120674                                                           15    9605
NP_001245142                                                           15    9605
NP_001120675                                                           15    9605
NP_060856                                                              15    9605
NP_001245141                                                           15    9605
NP_149015                                                              15    9605
NP_004827                                                              15    9605
NP_001123559                                                           15    9605
NP_001123558                                                           15    9605
NP_001123557                                                           15    9605
NP_001123556                                                           15    9605
NP_001123555                                                           15    9605
NP_031359                                                              15    9605
NP_542791                                                              15    9605
NP_001071092                                                           15    9605
NP_115808                                                              15    9605
NP_004696                                                              15    9605
NP_079022                                                              15    9605
NP_073587                                                              15    9605
XP_006726657                                                           15    9605
XP_006725285                                                           15    9605
XP_006724697                                                           15    9605
XP_006724696                                                           15    9605
XP_006724695                                                           15    9605
XP_006724694                                                           15    9605
XP_005272657                                                           15    9605
XP_006723247                                                           15    9605
XP_005258908                                                           15    9605
XP_005258907                                                           15    9605
XP_006723246                                                           15    9605
XP_005258906                                                           15    9605
XP_005259833                                                           15    9605
XP_005259832                                                           15    9605
XP_005259830                                                           15    9605
XP_005259829                                                           15    9605
XP_005268382                                                           15    9605
XP_005268381                                                           15    9605
XP_006719797                                                           15    9605
XP_006718837                                                           15    9605
XP_005271482                                                           15    9605
XP_006716681                                                           15    9605
XP_005250097                                                           15    9605
XP_005250096                                                           15    9605
XP_005250095                                                           15    9605
XP_006715989                                                           15    9605
XP_005248088                                                           15    9605
XP_005248087                                                           15    9605
XP_005248086                                                           15    9605
XP_006713990                                                           15    9605
XP_005248085                                                           15    9605
XP_005248084                                                           15    9605
XP_005248083                                                           15    9605
XP_006713989                                                           15    9605
XP_005248082                                                           15    9605
XP_005248081                                                           15    9605
XP_005248080                                                           15    9605
XP_005248079                                                           15    9605
XP_006713988                                                           15    9605
XP_005248078                                                           15    9605
XP_005248077                                                           15    9605
XP_005248076                                                           15    9605
XP_006713987                                                           15    9605
XP_006713986                                                           15    9605
XP_005248075                                                           15    9605
XP_005248074                                                           15    9605
XP_005248073                                                           15    9605
XP_006713985                                                           15    9605
XP_005248072                                                           15    9605
XP_006713984                                                           15    9605
XP_005248071                                                           15    9605
XP_005264706                                                           15    9605
XP_005263588                                                           15    9605
NP_852002                                                              15    9605
NP_001156956                                                           15    9605
NP_079506                                                              15    9605
NP_001025168                                                           15    9605
NP_001123560                                                           15    9605
NP_001139137                                                           15    9605
NP_001034201                                                           15    9605
>NP_003290
          Length = 803

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   DYIKLYVCR 9
           DYIKLYV R
Sbjct: 407 DYIKLYVRR 415
>NP_003702
          Length = 284

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   YIKLYVCR 9
           YI+ Y+CR
Sbjct: 147 YIEYYICR 154
>NP_795714
          Length = 285

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   YIKLYVCR 9
           YI+ Y+CR
Sbjct: 148 YIEYYICR 155
>XP_006714787
          Length = 221

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  YIKLYVCR 9
          YI+ Y+CR
Sbjct: 84 YIEYYICR 91
>NP_110389
          Length = 482

 Score = 17.7 bits (34), Expect =  1935
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  DYIKLYVCR 9
          DY  LY+C+
Sbjct: 23 DYSSLYMCK 31
>NP_060288
          Length = 460

 Score = 17.7 bits (34), Expect =  1935
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 1   DYIKLYVC 8
           DY+ ++VC
Sbjct: 158 DYVSIFVC 165
>NP_001245330
          Length = 1040

 Score = 17.7 bits (34), Expect =  1935
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   DYIKLYVCR 9
           D++ LY CR
Sbjct: 576 DHLSLYYCR 584
>NP_001035049
          Length = 1093

 Score = 17.7 bits (34), Expect =  1935
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   DYIKLYVCR 9
           D++ LY CR
Sbjct: 629 DHLSLYYCR 637
>NP_00124

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