Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 20 509 NP_000170 20 509 NP_001268422 20 509 NP_001268423 20 509 XP_005264328 20 509 XP_006726469 17 3301 XP_006713516 17 3301 NP_001073291 16 5631 NP_000417 16 5631 XP_005267039 16 5631 XP_005267038 16 5631 NP_848599 16 7355 XP_005255658 16 7355 XP_006713081 16 7355 NP_940978 15 9605 NP_001001132 15 9605 NP_003015 15 9605 NP_689799 15 9605 NP_005877 15 9605 NP_775922 15 9605 XP_005261083 15 9605 XP_005261088 15 9605 XP_005261084 15 9605 XP_006721186 15 9605 XP_005255829 15 9605 XP_006721185 15 9605 XP_006721184 15 9605 XP_005269639 15 9605 XP_006717716 15 9605 XP_006717715 15 9605 XP_006717714 15 9605 XP_006717713 15 9605 XP_006717712 15 9605 XP_006717711 15 9605 XP_005269635 15 9605 XP_006717710 15 9605 XP_006717709 15 9605 XP_006717708 15 9605 XP_006710700 15 9605 XP_006710699 15 9605 XP_006710698 15 9605 XP_005244806 15 9605 XP_006710697 15 9605 XP_006710696 15 9605>NP_001268421 Length = 1230 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GASDRTMSG 9 GASDR MSG Sbjct: 1048 GASDRIMSG 1056>NP_000170 Length = 1360 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GASDRTMSG 9 GASDR MSG Sbjct: 1178 GASDRIMSG 1186>NP_001268422 Length = 1058 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GASDRTMSG 9 GASDR MSG Sbjct: 876 GASDRIMSG 884>NP_001268423 Length = 1058 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GASDRTMSG 9 GASDR MSG Sbjct: 876 GASDRIMSG 884>XP_005264328 Length = 1261 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GASDRTMSG 9 GASDR MSG Sbjct: 1079 GASDRIMSG 1087>XP_006726469 Length = 175 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GASDRTMS 8 GA DRT+S Sbjct: 162 GAEDRTLS 169>XP_006713516 Length = 263 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GASDRTMS 8 GA DRT+S Sbjct: 250 GAEDRTLS 257>NP_001073291 Length = 3118 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 GASDRTMS 8 GAS+RT+S Sbjct: 2861 GASNRTIS 2868>NP_000417 Length = 3122 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 GASDRTMS 8 GAS+RT+S Sbjct: 2865 GASNRTIS 2872>XP_005267039 Length = 3206 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 GASDRTMS 8 GAS+RT+S Sbjct: 2949 GASNRTIS 2956>XP_005267038 Length = 3210 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 GASDRTMS 8 GAS+RT+S Sbjct: 2953 GASNRTIS 2960>NP_848599 Length = 3092 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ASDRTMSG 9 A+D++MSG Sbjct: 2514 ANDKSMSG 2521>XP_005255658 Length = 470 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GASDRTMSG 9 GAS RT+ G Sbjct: 69 GASGRTVCG 77>XP_006713081 Length = 3964 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ASDRTMSG 9 A+D++MSG Sbjct: 3386 ANDKSMSG 3393>NP_940978 Length = 2045 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GASDRTMSG 9 G+SD +SG Sbjct: 1065 GSSDEELSG 1073>NP_001001132 Length = 1220 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DRTMSG 9 D+TMSG Sbjct: 233 DKTMSG 238>NP_003015 Length = 1721 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DRTMSG 9 D+TMSG Sbjct: 233 DKTMSG 238>NP_689799 Length = 1684 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GASDRTMSG 9 G DR++SG Sbjct: 1149 GFKDRSLSG 1157>NP_005877 Length = 655 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GASDRTM 7 G+SDRT+ Sbjct: 207 GSSDRTI 213>NP_775922 Length = 6996 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GASDRTMSG 9 G+ D+TM G Sbjct: 3341 GSFDQTMKG 3349>XP_005261083 Length = 1716 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DRTMSG 9 D+TMSG Sbjct: 233 DKTMSG 238>XP_005261088 Length = 1144 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DRTMSG 9 D+TMSG Sbjct: 233 DKTMSG 238>XP_005261084 Length = 1215 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DRTMSG 9 D+TMSG Sbjct: 233 DKTMSG 238>XP_006721186 Length = 658 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GASDRTM 7 G+SDRT+ Sbjct: 207 GSSDRTI 213>XP_005255829 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GASDRTM 7 G+SDRT+ Sbjct: 207 GSSDRTI 213>XP_006721185 Length = 675 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GASDRTM 7 G+SDRT+ Sbjct: 207 GSSDRTI 213>XP_006721184 Length = 675 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GASDRTM 7 G+SDRT+ Sbjct: 207 GSSDRTI 213>XP_005269639 Length = 1580 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GASDRTMSG 9 G DR++SG Sbjct: 1092 GFKDRSLSG 1100>XP_006717716 Length = 1619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GASDRTMSG 9 G DR++SG Sbjct: 1131 GFKDRSLSG 1139>XP_006717715 Length = 1660 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GASDRTMSG 9 G DR++SG Sbjct: 1125 GFKDRSLSG 1133>XP_006717714 Length = 1665 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GASDRTMSG 9 G DR++SG Sbjct: 1182 GFKDRSLSG 1190>XP_006717713 Length = 1666 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GASDRTMSG 9 G DR++SG Sbjct: 1131 GFKDRSLSG 1139>XP_006717712 Length = 1670 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GASDRTMSG 9 G DR++SG Sbjct: 1182 GFKDRSLSG 1190>XP_006717711 Length = 1677 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GASDRTMSG 9 G DR++SG Sbjct: 1142 GFKDRSLSG 1150>XP_005269635 Length = 1695 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GASDRTMSG 9 G DR++SG Sbjct: 1160 GFKDRSLSG 1168>XP_006717710 Length = 1706 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GASDRTMSG 9 G DR++SG Sbjct: 1171 GFKDRSLSG 1179>XP_006717709 Length = 1712 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GASDRTMSG 9 G DR++SG Sbjct: 1182 GFKDRSLSG 1190>XP_006717708 Length = 1717 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GASDRTMSG 9 G DR++SG Sbjct: 1182 GFKDRSLSG 1190>XP_006710700 Length = 1479 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GASDRTMSG 9 G+SD +SG Sbjct: 487 GSSDEELSG 495>XP_006710699 Length = 1766 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GASDRTMSG 9 G+SD +SG Sbjct: 774 GSSDEELSG 782>XP_006710698 Length = 1907 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GASDRTMSG 9 G+SD +SG Sbjct: 1065 GSSDEELSG 1073>XP_005244806 Length = 2049 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GASDRTMSG 9 G+SD +SG Sbjct: 1065 GSSDEELSG 1073>XP_006710697 Length = 2053 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GASDRTMSG 9 G+SD +SG Sbjct: 1065 GSSDEELSG 1073>XP_006710696 Length = 2057 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GASDRTMSG 9 G+SD +SG Sbjct: 1065 GSSDEELSG 1073Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.302 0.117 0.313 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 443,991 Number of extensions: 670 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |