Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 390 NP_001075109 20 390 NP_001008781 17 4312 XP_006721061 17 4312 XP_006710064 17 4312 NP_005743 16 5631 NP_060719 16 7355 NP_001258968 16 7355 NP_001011649 16 7355 NP_078964 16 7355 NP_008949 16 7355 XP_005252650 16 7355 XP_006717569 16 7355 XP_006717568 16 7355 XP_006717567 16 7355 XP_006717248 16 7355 XP_006717247 16 7355 XP_006717246 16 7355 XP_006717245 16 7355 XP_006717244 16 7355 XP_006717243 16 7355 XP_006717242 16 7355 XP_006717006 16 7355 XP_006717005 16 7355 XP_006717004 16 7355 XP_006717003 16 7355 XP_005251736 16 7355 NP_002213 15 9605 NP_001093422 15 9605 NP_001161744 15 9605 NP_079390 15 9605 NP_002891 15 9605 NP_005003 15 9605 NP_001077061 15 9605 NP_055497 15 9605 NP_079490 15 9605 NP_001137301 15 9605 NP_001129042 15 9605 NP_005081 15 9605 NP_001185517 15 9605 XP_005266829 15 9605 XP_006722615 15 9605 XP_006719673 15 9605 XP_005269218 15 9605 XP_005269217 15 9605 XP_006719672 15 9605 XP_005269215 15 9605 XP_006716553 15 9605 XP_006716552 15 9605 XP_006716551 15 9605 XP_006716550 15 9605 XP_006713199 15 9605 XP_006713198 15 9605 XP_006713197 15 9605 XP_005265167 15 9605 XP_006713196 15 9605 XP_006713195 15 9605 XP_005265166 15 9605 XP_006713194 15 9605 NP_001108105 15 9605>NP_008835 Length = 4128 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GELKTQVTS 9 GELKTQ+TS Sbjct: 202 GELKTQMTS 210>NP_001075109 Length = 4097 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GELKTQVTS 9 GELKTQ+TS Sbjct: 202 GELKTQMTS 210>NP_001008781 Length = 4557 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GELKTQVT 8 G+LK QVT Sbjct: 452 GDLKAQVT 459>XP_006721061 Length = 688 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GELKTQVTS 9 GEL TQV S Sbjct: 259 GELSTQVGS 267>XP_006710064 Length = 688 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GELKTQVTS 9 GEL TQV S Sbjct: 259 GELSTQVGS 267>NP_005743 Length = 206 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GELKTQV 7 G+LKTQ+ Sbjct: 51 GDLKTQI 57>NP_060719 Length = 1893 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GELKTQVT 8 GE+K +VT Sbjct: 1819 GEMKAEVT 1826>NP_001258968 Length = 1663 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GELKTQVT 8 GE+K +VT Sbjct: 1589 GEMKAEVT 1596>NP_001011649 Length = 1814 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GELKTQVT 8 GE+K +VT Sbjct: 1740 GEMKAEVT 1747>NP_078964 Length = 628 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GELKTQV 7 GE+KTQ+ Sbjct: 490 GEIKTQL 496>NP_008949 Length = 2325 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ELKTQVTS 9 +LK+QVTS Sbjct: 1584 KLKSQVTS 1591>XP_005252650 Length = 692 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GELKTQV 7 GE+KTQ+ Sbjct: 554 GEIKTQL 560>XP_006717569 Length = 1278 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GELKTQV 7 GE+KTQ+ Sbjct: 1140 GEIKTQL 1146>XP_006717568 Length = 1314 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GELKTQV 7 GE+KTQ+ Sbjct: 1176 GEIKTQL 1182>XP_006717567 Length = 1385 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GELKTQV 7 GE+KTQ+ Sbjct: 1247 GEIKTQL 1253>XP_006717248 Length = 1664 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GELKTQVT 8 GE+K +VT Sbjct: 1590 GEMKAEVT 1597>XP_006717247 Length = 1670 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GELKTQVT 8 GE+K +VT Sbjct: 1590 GEMKAEVT 1597>XP_006717246 Length = 1820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GELKTQVT 8 GE+K +VT Sbjct: 1740 GEMKAEVT 1747>XP_006717245 Length = 1861 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GELKTQVT 8 GE+K +VT Sbjct: 1787 GEMKAEVT 1794>XP_006717244 Length = 1867 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GELKTQVT 8 GE+K +VT Sbjct: 1787 GEMKAEVT 1794>XP_006717243 Length = 1889 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GELKTQVT 8 GE+K +VT Sbjct: 1809 GEMKAEVT 1816>XP_006717242 Length = 1898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GELKTQVT 8 GE+K +VT Sbjct: 1818 GEMKAEVT 1825>XP_006717006 Length = 1760 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ELKTQVTS 9 +LK+QVTS Sbjct: 1004 KLKSQVTS 1011>XP_006717005 Length = 1788 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ELKTQVTS 9 +LK+QVTS Sbjct: 1032 KLKSQVTS 1039>XP_006717004 Length = 2240 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ELKTQVTS 9 +LK+QVTS Sbjct: 1584 KLKSQVTS 1591>XP_006717003 Length = 2278 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ELKTQVTS 9 +LK+QVTS Sbjct: 1584 KLKSQVTS 1591>XP_005251736 Length = 2325 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ELKTQVTS 9 +LK+QVTS Sbjct: 1584 KLKSQVTS 1591>NP_002213 Length = 2695 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GELKTQV 7 GEL TQV Sbjct: 914 GELMTQV 920>NP_001093422 Length = 2710 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GELKTQV 7 GEL TQV Sbjct: 929 GELMTQV 935>NP_001161744 Length = 2743 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GELKTQV 7 GEL TQV Sbjct: 923 GELMTQV 929>NP_079390 Length = 2479 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ELKTQV 7 ELKTQV Sbjct: 1786 ELKTQV 1791>NP_002891 Length = 1247 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GELKTQVT 8 GEL TQV+ Sbjct: 1053 GELLTQVS 1060>NP_005003 Length = 937 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GELKTQVTS 9 GE++ Q+T+ Sbjct: 196 GEIENQITA 204>NP_001077061 Length = 393 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GELKTQVTS 9 GE++ Q+T+ Sbjct: 196 GEIENQITA 204>NP_055497 Length = 1047 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ELKTQVTS 9 +L+TQ+TS Sbjct: 949 KLQTQITS 956>NP_079490 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ELKTQV 7 ELKTQV Sbjct: 294 ELKTQV 299>NP_001137301 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ELKTQV 7 ELKTQV Sbjct: 294 ELKTQV 299>NP_001129042 Length = 71 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GELKTQV 7 GELKT++ Sbjct: 46 GELKTEL 52>NP_005081 Length = 1012 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LKTQVT 8 LKTQVT Sbjct: 593 LKTQVT 598>NP_001185517 Length = 893 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LKTQVT 8 LKTQVT Sbjct: 593 LKTQVT 598>XP_005266829 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ELKTQV 7 ELKTQV Sbjct: 247 ELKTQV 252>XP_006722615 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ELKTQV 7 ELKTQV Sbjct: 294 ELKTQV 299>XP_006719673 Length = 1997 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ELKTQV 7 ELKTQV Sbjct: 1304 ELKTQV 1309>XP_005269218 Length = 2009 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ELKTQV 7 ELKTQV Sbjct: 1316 ELKTQV 1321>XP_005269217 Length = 2353 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ELKTQV 7 ELKTQV Sbjct: 1817 ELKTQV 1822>XP_006719672 Length = 2510 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ELKTQV 7 ELKTQV Sbjct: 1817 ELKTQV 1822>XP_005269215 Length = 2510 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 ELKTQV 7 ELKTQV Sbjct: 1817 ELKTQV 1822>XP_006716553 Length = 965 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ELKTQVTS 9 +L+TQ+TS Sbjct: 867 KLQTQITS 874>XP_006716552 Length = 1038 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ELKTQVTS 9 +L+TQ+TS Sbjct: 949 KLQTQITS 956>XP_006716551 Length = 1047 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ELKTQVTS 9 +L+TQ+TS Sbjct: 949 KLQTQITS 956>XP_006716550 Length = 1047 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ELKTQVTS 9 +L+TQ+TS Sbjct: 949 KLQTQITS 956>XP_006713199 Length = 2695 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GELKTQV 7 GEL TQV Sbjct: 938 GELMTQV 944>XP_006713198 Length = 2699 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GELKTQV 7 GEL TQV Sbjct: 938 GELMTQV 944>XP_006713197 Length = 2712 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GELKTQV 7 GEL TQV Sbjct: 914 GELMTQV 920>XP_005265167 Length = 2719 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GELKTQV 7 GEL TQV Sbjct: 938 GELMTQV 944>XP_006713196 Length = 2721 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GELKTQV 7 GEL TQV Sbjct: 923 GELMTQV 929>XP_006713195 Length = 2727 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GELKTQV 7 GEL TQV Sbjct: 929 GELMTQV 935>XP_005265166 Length = 2735 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GELKTQV 7 GEL TQV Sbjct: 938 GELMTQV 944>XP_006713194 Length = 2736 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GELKTQV 7 GEL TQV Sbjct: 938 GELMTQV 944>NP_001108105 Length = 781 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LKTQVT 8 LKTQVT Sbjct: 362 LKTQVT 367Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.294 0.113 0.269 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 385,819 Number of extensions: 713 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |