Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_065681                                                              22     134
NP_066124                                                              22     134
XP_006717999                                                           22     134
NP_001153699                                                           20     390
NP_079413                                                              20     390
XP_006720764                                                           20     390
XP_005254752                                                           20     390
XP_006720763                                                           20     390
XP_006720762                                                           20     390
XP_005254751                                                           20     390
NP_006821                                                              18    1135
NP_001137540                                                           18    1135
NP_001019767                                                           18    1135
XP_005259001                                                           18    1135
XP_005259000                                                           18    1135
NP_078878                                                              18    1935
NP_055524                                                              18    1935
NP_055815                                                              17    2528
NP_036211                                                              17    2528
NP_963924                                                              17    2528
XP_005253400                                                           17    2528
XP_006719122                                                           17    2528
XP_005253399                                                           17    2528
XP_006719121                                                           17    2528
XP_006711179                                                           17    2528
XP_006711178                                                           17    2528
XP_005244884                                                           17    2528
NP_006329                                                              17    2528
NP_001005324                                                           17    2528
NP_001273988                                                           17    3301
NP_055867                                                              17    3301
NP_078918                                                              17    3301
NP_066941                                                              17    3301
XP_005262143                                                           17    3301
XP_006715736                                                           17    3301
XP_006715735                                                           17    3301
XP_005249722                                                           17    3301
XP_006715734                                                           17    3301
XP_006715733                                                           17    3301
NP_056126                                                              17    4312
NP_938073                                                              17    4312
NP_001269512                                                           17    4312
NP_001269514                                                           17    4312
NP_001269511                                                           17    4312
NP_115724                                                              17    4312
NP_001119583                                                           17    4312
NP_525021                                                              17    4312
NP_005422                                                              17    4312
NP_065811                                                              17    4312
XP_006712712                                                           17    4312
XP_006712711                                                           17    4312
XP_006712710                                                           17    4312
XP_006712709                                                           17    4312
XP_005246482                                                           17    4312
XP_005246481                                                           17    4312
XP_006712450                                                           17    4312
XP_005246480                                                           17    4312
XP_006712449                                                           17    4312
XP_005246478                                                           17    4312
XP_005244815                                                           17    4312
XP_005244801                                                           17    4312
XP_006710664                                                           17    4312
XP_006710663                                                           17    4312
NP_004328                                                              17    4312
NP_001265875                                                           16    5631
NP_056250                                                              16    5631
NP_899195                                                              16    5631
NP_001129498                                                           16    5631
NP_109598                                                              16    5631
NP_001129704                                                           16    5631
NP_003322                                                              16    5631
NP_056257                                                              16    5631
NP_001267468                                                           16    5631
NP_904355                                                              16    5631
NP_001243670                                                           16    5631
NP_001243671                                                           16    5631
NP_001414                                                              16    5631
XP_005250910                                                           16    5631
XP_006713351                                                           16    5631
XP_005265436                                                           16    5631
XP_006713350                                                           16    5631
XP_005265435                                                           16    5631
XP_005265434                                                           16    5631
XP_006713349                                                           16    5631
XP_006713148                                                           16    5631
XP_006713147                                                           16    5631
NP_061751                                                              16    5631
NP_115782                                                              16    5631
NP_001449                                                              16    7355
NP_001120959                                                           16    7355
NP_001276025                                                           16    7355
NP_001276030                                                           16    7355
NP_001276024                                                           16    7355
NP_060241                                                              16    7355
NP_001276029                                                           16    7355
NP_001276028                                                           16    7355
NP_001276027                                                           16    7355
NP_001254494                                                           16    7355
NP_009120                                                              16    7355
NP_114434                                                              16    7355
NP_001034659                                                           16    7355
NP_037480                                                              16    7355
NP_001139433                                                           16    7355
NP_005063                                                              16    7355
NP_001139436                                                           16    7355
NP_001139435                                                           16    7355
NP_001139434                                                           16    7355
NP_001821                                                              16    7355
NP_001243873                                                           16    7355
NP_076425                                                              16    7355
NP_001006635                                                           16    7355
NP_060524                                                              16    7355
NP_005683                                                              16    7355
NP_005082                                                              16    7355
XP_006721123                                                           16    7355
XP_006721122                                                           16    7355
XP_005255471                                                           16    7355
XP_006721121                                                           16    7355
XP_005255470                                                           16    7355
XP_006721120                                                           16    7355
XP_005255569                                                           16    7355
XP_005255568                                                           16    7355
XP_006715973                                                           16    7355
XP_006715887                                                           16    7355
XP_005249988                                                           16    7355
XP_006713276                                                           16    7355
XP_005265313                                                           16    7355
XP_005265312                                                           16    7355
XP_005265309                                                           16    7355
XP_005265307                                                           16    7355
NP_001088                                                              16    7355
NP_057607                                                              16    7355
NP_783864                                                              15    9605
NP_001263255                                                           15    9605
NP_001271123                                                           15    9605
NP_653186                                                              15    9605
NP_055415                                                              15    9605
NP_060388                                                              15    9605
NP_115982                                                              15    9605
NP_001140171                                                           15    9605
NP_001140170                                                           15    9605
NP_006786                                                              15    9605
NP_006737                                                              15    9605
NP_057280                                                              15    9605
NP_001269828                                                           15    9605
NP_001269829                                                           15    9605
NP_001269830                                                           15    9605
NP_003765                                                              15    9605
NP_001093867                                                           15    9605
NP_008954                                                              15    9605
NP_001269373                                                           15    9605
NP_001186710                                                           15    9605
NP_055897                                                              15    9605
NP_001032629                                                           15    9605
NP_002705                                                              15    9605
NP_060341                                                              15    9605
NP_001269374                                                           15    9605
NP_064501                                                              15    9605
NP_001121899                                                           15    9605
NP_001121900                                                           15    9605
NP_001243391                                                           15    9605
NP_001243389                                                           15    9605
NP_001243392                                                           15    9605
NP_001243385                                                           15    9605
XP_006726166                                                           15    9605
XP_006726165                                                           15    9605
XP_006726164                                                           15    9605
XP_006726163                                                           15    9605
XP_006726071                                                           15    9605
XP_006726070                                                           15    9605
XP_006726069                                                           15    9605
XP_006726068                                                           15    9605
XP_006725978                                                           15    9605
XP_006725977                                                           15    9605
XP_006725976                                                           15    9605
XP_006725975                                                           15    9605
XP_006725886                                                           15    9605
XP_006725885                                                           15    9605
XP_006725884                                                           15    9605
XP_006725883                                                           15    9605
XP_006725769                                                           15    9605
XP_006725768                                                           15    9605
XP_006725767                                                           15    9605
XP_006725766                                                           15    9605
XP_006725555                                                           15    9605
XP_006725554                                                           15    9605
XP_006725553                                                           15    9605
XP_006725552                                                           15    9605
XP_005274636                                                           15    9605
XP_006724572                                                           15    9605
XP_006724571                                                           15    9605
XP_005274635                                                           15    9605
XP_006718494                                                           15    9605
XP_005273799                                                           15    9605
XP_006718493                                                           15    9605
XP_006718487                                                           15    9605
XP_005269645                                                           15    9605
XP_006717720                                                           15    9605
XP_006717719                                                           15    9605
XP_006716943                                                           15    9605
XP_006715196                                                           15    9605
XP_006715195                                                           15    9605
XP_006715194                                                           15    9605
XP_006715193                                                           15    9605
XP_006714309                                                           15    9605
XP_005262701                                                           15    9605
XP_006712269                                                           15    9605
XP_006712268                                                           15    9605
XP_005246303                                                           15    9605
XP_005244820                                                           15    9605
XP_006710778                                                           15    9605
NP_775811                                                              15    9605
>NP_065681
          Length = 1072

 Score = 21.6 bits (44), Expect =   134
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   HDYRLVLN 8
           HDYRLVLN
Sbjct: 352 HDYRLVLN 359
>NP_066124
          Length = 1114

 Score = 21.6 bits (44), Expect =   134
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   HDYRLVLN 8
           HDYRLVLN
Sbjct: 352 HDYRLVLN 359
>XP_006717999
          Length = 1207

 Score = 21.6 bits (44), Expect =   134
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   HDYRLVLN 8
           HDYRLVLN
Sbjct: 445 HDYRLVLN 452
>NP_001153699
          Length = 2330

 Score = 20.0 bits (40), Expect =   390
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   DYRLVLNW 9
           D+R+VLNW
Sbjct: 846 DHRIVLNW 853
>NP_079413
          Length = 2443

 Score = 20.0 bits (40), Expect =   390
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   DYRLVLNW 9
           D+R+VLNW
Sbjct: 846 DHRIVLNW 853
>XP_006720764
          Length = 1584

 Score = 20.0 bits (40), Expect =   390
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   DYRLVLNW 9
           D+R+VLNW
Sbjct: 846 DHRIVLNW 853
>XP_005254752
          Length = 2357

 Score = 20.0 bits (40), Expect =   390
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   DYRLVLNW 9
           D+R+VLNW
Sbjct: 760 DHRIVLNW 767
>XP_006720763
          Length = 2395

 Score = 20.0 bits (40), Expect =   390
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   DYRLVLNW 9
           D+R+VLNW
Sbjct: 846 DHRIVLNW 853
>XP_006720762
          Length = 2397

 Score = 20.0 bits (40), Expect =   390
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   DYRLVLNW 9
           D+R+VLNW
Sbjct: 846 DHRIVLNW 853
>XP_005254751
          Length = 2407

 Score = 20.0 bits (40), Expect =   390
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   DYRLVLNW 9
           D+R+VLNW
Sbjct: 846 DHRIVLNW 853
>NP_006821
          Length = 56

 Score = 18.5 bits (36), Expect =  1135
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2  DYRLVLNW 9
          D+RL+L+W
Sbjct: 37 DWRLILDW 44
>NP_001137540
          Length = 448

 Score = 18.5 bits (36), Expect =  1135
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   HDYRLVLNW 9
           H YRL+ +W
Sbjct: 348 HKYRLIKHW 356
>NP_001019767
          Length = 489

 Score = 18.5 bits (36), Expect =  1135
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   HDYRLVLNW 9
           H YRL+ +W
Sbjct: 389 HKYRLIKHW 397
>XP_005259001
          Length = 377

 Score = 18.5 bits (36), Expect =  1135
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   HDYRLVLNW 9
           H YRL+ +W
Sbjct: 277 HKYRLIKHW 285
>XP_005259000
          Length = 377

 Score = 18.5 bits (36), Expect =  1135
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   HDYRLVLNW 9
           H YRL+ +W
Sbjct: 277 HKYRLIKHW 285
>NP_078878
          Length = 861

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   DYRLVLNW 9
           DYR VL W
Sbjct: 171 DYRPVLRW 178
>NP_055524
          Length = 3546

 Score = 17.7 bits (34), Expect =  1935
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    DYRLVLNW 9
            +YRL+ NW
Sbjct: 1858 NYRLIHNW 1865
>

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