Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005912 20 509 XP_005248577 20 509 XP_005248576 20 509 NP_004781 17 2528 NP_695008 17 2528 NP_695010 17 2528 NP_695009 17 2528 XP_006723521 17 4312 NP_001010851 17 4312 NP_853556 16 5631 NP_001193730 16 5631 NP_031396 16 5631 NP_001171559 16 7355 NP_003889 16 7355 NP_055445 16 7355 XP_005255053 16 7355 XP_005268209 16 7355 XP_005268208 16 7355 XP_005267256 16 7355 XP_005267255 16 7355 XP_006715655 16 7355 XP_005267254 16 7355 XP_006715654 16 7355 XP_003403793 16 7355 NP_003805 16 7355 NP_001360 15 9605 NP_003257 15 9605 NP_612564 15 9605 NP_001230526 15 9605 NP_065969 15 9605 NP_001231878 15 9605 NP_058648 15 9605 NP_065136 15 9605 NP_787954 15 9605 NP_059130 15 9605 NP_982354 15 9605 NP_060549 15 9605 NP_665810 15 9605 XP_005254520 15 9605 XP_005266465 15 9605 XP_005266464 15 9605 XP_005266463 15 9605 XP_005270056 15 9605 XP_005270055 15 9605 XP_005248319 15 9605 XP_005264455 15 9605 NP_001172078 15 9605 NP_001104789 15 9605>NP_005912 Length = 1512 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NTIQKFVS 9 NTIQKFVS Sbjct: 406 NTIQKFVS 413>XP_005248577 Length = 1349 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NTIQKFVS 9 NTIQKFVS Sbjct: 243 NTIQKFVS 250>XP_005248576 Length = 1375 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NTIQKFVS 9 NTIQKFVS Sbjct: 269 NTIQKFVS 276>NP_004781 Length = 563 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HNTIQKFVS 9 HNT+Q F + Sbjct: 34 HNTLQNFTA 42>NP_695008 Length = 550 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HNTIQKFVS 9 HNT+Q F + Sbjct: 34 HNTLQNFTA 42>NP_695010 Length = 519 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HNTIQKFVS 9 HNT+Q F + Sbjct: 34 HNTLQNFTA 42>NP_695009 Length = 506 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HNTIQKFVS 9 HNT+Q F + Sbjct: 34 HNTLQNFTA 42>XP_006723521 Length = 425 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NTIQKFVS 9 N +QKF+S Sbjct: 91 NQVQKFIS 98>NP_001010851 Length = 468 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NTIQKFVS 9 N +QKF+S Sbjct: 134 NQVQKFIS 141>NP_853556 Length = 319 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NTIQKFVS 9 +TIQKF++ Sbjct: 21 STIQKFIN 28>NP_001193730 Length = 337 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NTIQKFVS 9 +TIQKF++ Sbjct: 42 STIQKFIN 49>NP_031396 Length = 340 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NTIQKFVS 9 +TIQKF++ Sbjct: 42 STIQKFIN 49>NP_001171559 Length = 1259 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 NTIQKFVS 9 NT+Q F++ Sbjct: 157 NTVQSFIA 164>NP_003889 Length = 1496 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 NTIQKFVS 9 NT+Q F++ Sbjct: 394 NTVQSFIA 401>NP_055445 Length = 1267 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HNTIQKF 7 H+T++KF Sbjct: 1036 HDTVKKF 1042>XP_005255053 Length = 1267 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HNTIQKF 7 H+T++KF Sbjct: 1036 HDTVKKF 1042>XP_005268209 Length = 776 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HNTIQKF 7 H+T+Q+F Sbjct: 628 HSTVQQF 634>XP_005268208 Length = 776 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HNTIQKF 7 H+T+Q+F Sbjct: 628 HSTVQQF 634>XP_005267256 Length = 1113 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 NTIQKFVS 9 NT+Q F++ Sbjct: 11 NTVQSFIA 18>XP_005267255 Length = 1165 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 NTIQKFVS 9 NT+Q F++ Sbjct: 63 NTVQSFIA 70>XP_006715655 Length = 1288 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 NTIQKFVS 9 NT+Q F++ Sbjct: 394 NTVQSFIA 401>XP_005267254 Length = 1443 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 NTIQKFVS 9 NT+Q F++ Sbjct: 341 NTVQSFIA 348>XP_006715654 Length = 1495 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 NTIQKFVS 9 NT+Q F++ Sbjct: 393 NTVQSFIA 400>XP_003403793 Length = 846 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 HNTIQKFV 8 +NT+QK++ Sbjct: 450 NNTVQKYL 457>NP_003805 Length = 776 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HNTIQKF 7 H+T+Q+F Sbjct: 628 HSTVQQF 634>NP_001360 Length = 4624 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HNTIQKFV 8 HN ++KF+ Sbjct: 548 HNELRKFM 555>NP_003257 Length = 799 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 HNTIQKF 7 HN IQ F Sbjct: 119 HNLIQSF 125>NP_612564 Length = 839 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 HNTIQKF 7 HN IQ F Sbjct: 159 HNLIQSF 165>NP_001230526 Length = 1287 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTIQKF 7 NTIQK+ Sbjct: 995 NTIQKY 1000>NP_065969 Length = 828 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 HNTIQKFV 8 H T+ KF+ Sbjct: 644 HETVGKFI 651>NP_001231878 Length = 828 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 HNTIQKFV 8 H T+ KF+ Sbjct: 644 HETVGKFI 651>NP_058648 Length = 1264 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTIQKF 7 NTIQK+ Sbjct: 995 NTIQKY 1000>NP_065136 Length = 1203 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HNTIQKFVS 9 HN Q FVS Sbjct: 574 HNHFQFFVS 582>NP_787954 Length = 1551 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 HNTIQKF 7 H T+Q+F Sbjct: 1028 HQTVQQF 1034>NP_059130 Length = 1551 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 HNTIQKF 7 H T+Q+F Sbjct: 1028 HQTVQQF 1034>NP_982354 Length = 1237 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HNTIQKFVS 9 HN Q FVS Sbjct: 574 HNHFQFFVS 582>NP_060549 Length = 995 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HNTIQK 6 H+TIQK Sbjct: 279 HSTIQK 284>NP_665810 Length = 275 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HNTIQKFVS 9 H TI FVS Sbjct: 126 HRTILAFVS 134>XP_005254520 Length = 1235 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 HNTIQKF 7 H T+Q+F Sbjct: 712 HQTVQQF 718>XP_005266465 Length = 1019 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HNTIQKFVS 9 HN Q FVS Sbjct: 574 HNHFQFFVS 582>XP_005266464 Length = 1161 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HNTIQKFVS 9 HN Q FVS Sbjct: 574 HNHFQFFVS 582>XP_005266463 Length = 1195 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HNTIQKFVS 9 HN Q FVS Sbjct: 574 HNHFQFFVS 582>XP_005270056 Length = 789 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 HNTIQKFV 8 H T+ KF+ Sbjct: 644 HETVGKFI 651>XP_005270055 Length = 828 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 HNTIQKFV 8 H T+ KF+ Sbjct: 644 HETVGKFI 651>XP_005248319 Length = 4609 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HNTIQKFV 8 HN ++KF+ Sbjct: 533 HNELRKFM 540>XP_005264455 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HNTIQK 6 H+TIQK Sbjct: 279 HSTIQK 284>NP_001172078 Length = 220 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 HNTIQKF 7 H T+Q+F Sbjct: 142 HKTVQEF 148>NP_001104789 Length = 220 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 HNTIQKF 7 H T+Q+F Sbjct: 142 HKTVQEF 148Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.127 0.361 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 387,125 Number of extensions: 605 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |