Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_001245210                                                           20     299
NP_000242                                                              20     299
XP_005264389                                                           20     299
NP_001028774                                                           19     869
NP_067063                                                              18    1135
NP_853553                                                              18    1482
XP_005264449                                                           18    1482
NP_001263309                                                           17    2528
NP_057733                                                              17    2528
NP_001268421                                                           17    3301
NP_000170                                                              17    3301
NP_001268422                                                           17    3301
NP_001268423                                                           17    3301
NP_008968                                                              17    3301
NP_001016                                                              17    3301
XP_006718821                                                           17    3301
XP_005264328                                                           17    3301
NP_001248757                                                           17    4312
NP_001248756                                                           17    4312
NP_001073160                                                           17    4312
NP_115986                                                              17    4312
NP_003276                                                              17    4312
NP_001153699                                                           16    5631
NP_079413                                                              16    5631
NP_002600                                                              16    5631
NP_001269389                                                           16    5631
NP_001074025                                                           16    5631
XP_006723318                                                           16    5631
XP_005256532                                                           16    5631
XP_006720764                                                           16    5631
XP_005254752                                                           16    5631
XP_006720763                                                           16    5631
XP_006720762                                                           16    5631
XP_005254751                                                           16    5631
XP_005268521                                                           16    5631
NP_950248                                                              16    5631
NP_659491                                                              16    5631
NP_060495                                                              16    5631
NP_001121188                                                           16    7355
NP_000117                                                              16    7355
NP_004954                                                              16    7355
NP_061948                                                              16    7355
NP_001231800                                                           16    7355
NP_001334                                                              16    7355
NP_055178                                                              16    7355
NP_001264984                                                           16    7355
NP_795352                                                              16    7355
XP_005266395                                                           16    7355
XP_006710341                                                           16    7355
XP_005270404                                                           16    7355
XP_005270402                                                           16    7355
XP_005270400                                                           16    7355
XP_006710340                                                           16    7355
XP_005270398                                                           16    7355
XP_006710339                                                           16    7355
XP_006710338                                                           16    7355
NP_001157790                                                           15    9605
NP_001269600                                                           15    9605
NP_001269601                                                           15    9605
NP_055877                                                              15    9605
NP_001275656                                                           15    9605
NP_001275657                                                           15    9605
NP_001243874                                                           15    9605
NP_001139782                                                           15    9605
NP_057098                                                              15    9605
NP_001020951                                                           15    9605
NP_001157791                                                           15    9605
NP_001157789                                                           15    9605
NP_001448                                                              15    9605
NP_001138548                                                           15    9605
NP_061936                                                              15    9605
NP_115518                                                              15    9605
NP_001034589                                                           15    9605
XP_006726674                                                           15    9605
XP_006722395                                                           15    9605
XP_006722394                                                           15    9605
XP_005258167                                                           15    9605
XP_006722393                                                           15    9605
XP_006722392                                                           15    9605
XP_006722391                                                           15    9605
XP_006722390                                                           15    9605
XP_005258166                                                           15    9605
XP_006722389                                                           15    9605
XP_005258165                                                           15    9605
XP_005258164                                                           15    9605
XP_006721084                                                           15    9605
XP_006717794                                                           15    9605
XP_005269715                                                           15    9605
XP_006717793                                                           15    9605
XP_005269713                                                           15    9605
XP_006717198                                                           15    9605
XP_006717197                                                           15    9605
XP_006713311                                                           15    9605
XP_006713310                                                           15    9605
XP_005264819                                                           15    9605
XP_006713309                                                           15    9605
XP_006713130                                                           15    9605
XP_005265039                                                           15    9605
XP_005265038                                                           15    9605
XP_005265035                                                           15    9605
XP_005265034                                                           15    9605
XP_005264325                                                           15    9605
XP_006712055                                                           15    9605
XP_006712054                                                           15    9605
XP_005264324                                                           15    9605
XP_006710423                                                           15    9605
NP_852002                                                              15    9605
NP_001156956                                                           15    9605
NP_079506                                                              15    9605
NP_963844                                                              15    9605
>NP_001245210
          Length = 868

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   IAFIPNDV 8
           IAFIPNDV
Sbjct: 582 IAFIPNDV 589
>NP_000242
          Length = 934

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   IAFIPNDV 8
           IAFIPNDV
Sbjct: 648 IAFIPNDV 655
>XP_005264389
          Length = 921

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   IAFIPNDV 8
           IAFIPNDV
Sbjct: 648 IAFIPNDV 655
>NP_001028774
          Length = 1379

 Score = 18.9 bits (37), Expect =   869
 Identities = 6/9 (66%), Positives = 9/9 (100%)

Query: 1   IAFIPNDVT 9
           +AFIPN++T
Sbjct: 447 VAFIPNNLT 455
>NP_067063
          Length = 472

 Score = 18.5 bits (36), Expect =  1135
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   FIPNDVT 9
           F+PNDVT
Sbjct: 384 FLPNDVT 390
>NP_853553
          Length = 410

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   IAFIPNDVT 9
           +AF+P D+T
Sbjct: 338 VAFMPEDIT 346
>XP_005264449
          Length = 467

 Score = 18.1 bits (35), Expect =  1482
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   IAFIPNDVT 9
           +AF+P D+T
Sbjct: 395 VAFMPEDIT 403
>NP_001263309
          Length = 851

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   IAFIPNDVT 9
           + FIP+D+T
Sbjct: 467 LRFIPDDIT 475
>NP_057733
          Length = 851

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   IAFIPNDVT 9
           + FIP+D+T
Sbjct: 467 LRFIPDDIT 475
>NP_001268421
          Length = 1230

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   FIPNDV 8
           FIPND+
Sbjct: 978 FIPNDI 983
>NP_000170
          Length = 1360

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    FIPNDV 8
            FIPND+
Sbjct: 1108 FIPNDI 1113
>NP_001268422
          Length = 1058

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   FIPNDV 8
           FIPND+
Sbjct: 806 FIPNDI 811
>NP_001268423
          Length = 1058

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   FIPNDV 8
           FIPND+
Sbjct: 806 FIPNDI 811
>NP_008968
          Length = 889

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   FIPNDV 8
           F+PNDV
Sbjct: 807 FVPNDV 812
>NP_001016
          Length = 143

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2  AFIPND 7
          AF+PND
Sbjct: 83 AFVPND 88
>XP_006718821
          Length = 889

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   FIPNDV 8
           F+PNDV
Sbjct: 807 FVPNDV 812
>XP_005264328
          Length = 1261

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    FIPNDV 8
            FIPND+
Sbjct: 1009 FIPNDI 1014
>NP_001248757
          Length = 712

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   FIPNDVT 9
           F+P+DVT
Sbjct: 193 FLPSDVT 199
>NP_001248756
          Length = 695

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   FIPNDVT 9
           F+P+DVT
Sbjct: 176 FLPSDVT 182
>NP_001073160
          Length = 662

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   FIPNDVT 9
           F+P+DVT
Sbjct: 143 FLPSDVT 149
>NP_115986
          Length = 679

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   FIPNDVT 9
           F+P+DVT
Sbjct: 160 FLPSDVT 166
>NP_003276
          Length = 1358

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   IAFIPNDVT 9
           IA +P+DVT
Sbjct: 459 IAQVPSDVT 467
>NP_001153699
          Length = 2330

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   AFIPNDV 8
           AFIP D+
Sbjct: 385 AFIPQDI 391
>NP_079413
          Length = 2443

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   AFIPNDV 8
           AFIP D+
Sbjct: 385 AFIPQDI 391
>NP_002600
          Length = 1106

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 1   IAFIPND 7
           + F+PND
Sbjct: 125 VGFLPND 131

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