Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 21 229 XP_005262424 21 229 NP_001714 17 2528 NP_001041445 17 2528 XP_005249383 17 2528 NP_001127848 17 3301 NP_001127847 17 3301 NP_061957 17 3301 XP_005269978 17 3301 NP_001018048 17 4312 NP_056001 17 4312 NP_001018047 17 4312 NP_150648 17 4312 XP_005263742 17 4312 XP_005263740 17 4312 XP_005263739 17 4312 XP_005263738 17 4312 NP_055178 16 5631 NP_001264984 16 5631 XP_005266395 16 5631 NP_008877 16 7355 NP_001269961 16 7355 NP_001269960 16 7355 NP_003119 16 7355 NP_001269962 16 7355 NP_057190 16 7355 NP_878255 16 7355 NP_001244305 16 7355 XP_005267526 16 7355 XP_005274250 16 7355 XP_006718734 16 7355 XP_006718733 16 7355 XP_005274249 16 7355 XP_006718732 16 7355 XP_006713658 16 7355 XP_005264575 16 7355 XP_006712150 16 7355 XP_005264574 16 7355 NP_842565 16 7355 NP_149017 15 9605 NP_001106962 15 9605 NP_063968 15 9605 NP_001112 15 9605 NP_058432 15 9605 XP_005262146 15 9605 XP_005262145 15 9605 XP_005262144 15 9605 XP_006720688 15 9605 XP_006720687 15 9605 XP_006720686 15 9605 XP_005269592 15 9605 XP_006717692 15 9605 XP_006717691 15 9605 XP_005269591 15 9605 XP_006717690 15 9605 XP_005269590 15 9605 XP_006717689 15 9605 XP_005269588 15 9605 XP_005269587 15 9605 XP_005269586 15 9605>NP_722576 Length = 3080 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 INIVLEKQN 9 IN+VLEKQN Sbjct: 2518 INVVLEKQN 2526>XP_005262424 Length = 2875 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 INIVLEKQN 9 IN+VLEKQN Sbjct: 2313 INVVLEKQN 2321>NP_001714 Length = 2649 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 NIVLEKQ 8 NIVLEKQ Sbjct: 1599 NIVLEKQ 1605>NP_001041445 Length = 421 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 INIVLEKQN 9 +NI+LE QN Sbjct: 275 LNILLENQN 283>XP_005249383 Length = 3186 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 NIVLEKQ 8 NIVLEKQ Sbjct: 2136 NIVLEKQ 2142>NP_001127848 Length = 371 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 INIVLEKQN 9 +N+VL KQN Sbjct: 118 MNLVLTKQN 126>NP_001127847 Length = 383 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 INIVLEKQN 9 +N+VL KQN Sbjct: 118 MNLVLTKQN 126>NP_061957 Length = 372 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 INIVLEKQN 9 +N+VL KQN Sbjct: 118 MNLVLTKQN 126>XP_005269978 Length = 269 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 INIVLEKQN 9 +N+VL KQN Sbjct: 4 MNLVLTKQN 12>NP_001018048 Length = 3069 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 INIVLEKQN 9 INIV EK N Sbjct: 2079 INIVPEKDN 2087>NP_056001 Length = 3095 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 INIVLEKQN 9 INIV EK N Sbjct: 2079 INIVPEKDN 2087>NP_001018047 Length = 3135 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 INIVLEKQN 9 INIV EK N Sbjct: 2040 INIVPEKDN 2048>NP_150648 Length = 3174 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 INIVLEKQN 9 INIV EK N Sbjct: 2079 INIVPEKDN 2087>XP_005263742 Length = 1043 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NIVLEKQN 9 +IVLEK+N Sbjct: 922 SIVLEKEN 929>XP_005263740 Length = 1441 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NIVLEKQN 9 +IVLEK+N Sbjct: 922 SIVLEKEN 929>XP_005263739 Length = 1839 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NIVLEKQN 9 +IVLEK+N Sbjct: 922 SIVLEKEN 929>XP_005263738 Length = 1876 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NIVLEKQN 9 +IVLEK+N Sbjct: 922 SIVLEKEN 929>NP_055178 Length = 4579 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 INIVLEKQN 9 +NIVLE+++ Sbjct: 375 VNIVLEEES 383>NP_001264984 Length = 4432 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 INIVLEKQN 9 +NIVLE+++ Sbjct: 228 VNIVLEEES 236>XP_005266395 Length = 4588 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 INIVLEKQN 9 +NIVLE+++ Sbjct: 375 VNIVLEEES 383>NP_008877 Length = 2390 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 INIVLEKQ 8 +NI+L+KQ Sbjct: 1418 VNILLKKQ 1425>NP_001269961 Length = 583 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NIVLEKQN 9 N+VL++QN Sbjct: 478 NLVLKQQN 485>NP_001269960 Length = 457 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NIVLEKQN 9 N+VL++QN Sbjct: 352 NLVLKQQN 359>NP_003119 Length = 2364 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 INIVLEKQ 8 +NI+L+KQ Sbjct: 1415 VNILLKKQ 1422>NP_001269962 Length = 457 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NIVLEKQN 9 N+VL++QN Sbjct: 352 NLVLKQQN 359>NP_057190 Length = 642 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NIVLEKQN 9 N+VL++QN Sbjct: 537 NLVLKQQN 544>NP_878255 Length = 575 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NIVLEKQN 9 N+VL++QN Sbjct: 470 NLVLKQQN 477>NP_001244305 Length = 550 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NIVLEKQN 9 N+VL++QN Sbjct: 445 NLVLKQQN 452>XP_005267526 Length = 617 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NIVLEKQN 9 N+VL++QN Sbjct: 512 NLVLKQQN 519>XP_005274250 Length = 2390 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 INIVLEKQ 8 +NI+L+KQ Sbjct: 1418 VNILLKKQ 1425>XP_006718734 Length = 2390 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 INIVLEKQ 8 +NI+L+KQ Sbjct: 1418 VNILLKKQ 1425>XP_006718733 Length = 2390 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 INIVLEKQ 8 +NI+L+KQ Sbjct: 1418 VNILLKKQ 1425>XP_005274249 Length = 2390 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 INIVLEKQ 8 +NI+L+KQ Sbjct: 1418 VNILLKKQ 1425>XP_006718732 Length = 2397 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 INIVLEKQ 8 +NI+L+KQ Sbjct: 1425 VNILLKKQ 1432>XP_006713658 Length = 212 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 INIVLEKQ 8 IN+V+EK+ Sbjct: 176 INLVIEKR 183>XP_005264575 Length = 2351 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 INIVLEKQ 8 +NI+L+KQ Sbjct: 1402 VNILLKKQ 1409>XP_006712150 Length = 2364 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 INIVLEKQ 8 +NI+L+KQ Sbjct: 1415 VNILLKKQ 1422>XP_005264574 Length = 2364 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 INIVLEKQ 8 +NI+L+KQ Sbjct: 1415 VNILLKKQ 1422>NP_842565 Length = 2155 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 INIVLEKQ 8 +NI+L+KQ Sbjct: 1402 VNILLKKQ 1409>NP_149017 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VLEKQN 9 +LEKQN Sbjct: 31 ILEKQN 36>NP_001106962 Length = 1084 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 NIVLEKQ 8 N+++EKQ Sbjct: 89 NLIMEKQ 95>NP_063968 Length = 674 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NIVLEKQN 9 N VLEK+N Sbjct: 499 NEVLEKRN 506>NP_001112 Length = 674 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NIVLEKQN 9 N VLEK+N Sbjct: 499 NEVLEKRN 506>NP_058432 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NIVLEKQN 9 N VLEK+N Sbjct: 499 NEVLEKRN 506>XP_005262146 Length = 1084 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 NIVLEKQ 8 N+++EKQ Sbjct: 89 NLIMEKQ 95>XP_005262145 Length = 1084 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 NIVLEKQ 8 N+++EKQ Sbjct: 89 NLIMEKQ 95>XP_005262144 Length = 1084 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 NIVLEKQ 8 N+++EKQ Sbjct: 89 NLIMEKQ 95>XP_006720688 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VLEKQN 9 +LEKQN Sbjct: 31 ILEKQN 36>XP_006720687 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VLEKQN 9 +LEKQN Sbjct: 39 ILEKQN 44>XP_006720686 Length = 507 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VLEKQN 9 +LEKQN Sbjct: 19 ILEKQN 24>XP_005269592 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NIVLEKQN 9 N VLEK+N Sbjct: 421 NEVLEKRN 428>XP_006717692 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NIVLEKQN 9 N VLEK+N Sbjct: 421 NEVLEKRN 428>XP_006717691 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NIVLEKQN 9 N VLEK+N Sbjct: 499 NEVLEKRN 506>XP_005269591 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NIVLEKQN 9 N VLEK+N Sbjct: 499 NEVLEKRN 506>XP_006717690 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NIVLEKQN 9 N VLEK+N Sbjct: 499 NEVLEKRN 506>XP_005269590 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NIVLEKQN 9 N VLEK+N Sbjct: 499 NEVLEKRN 506>XP_006717689 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NIVLEKQN 9 N VLEK+N Sbjct: 499 NEVLEKRN 506>XP_005269588 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NIVLEKQN 9 N VLEK+N Sbjct: 499 NEVLEKRN 506>XP_005269587 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NIVLEKQN 9 N VLEK+N Sbjct: 499 NEVLEKRN 506>XP_005269586 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NIVLEKQN 9 N VLEK+N Sbjct: 499 NEVLEKRN 506Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.136 0.329 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 535,025 Number of extensions: 940 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |