Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 21 229 XP_005262424 21 229 NP_078966 17 3301 NP_775882 16 5631 NP_060887 16 5631 NP_001161221 16 5631 XP_006726572 16 5631 XP_006726571 16 5631 XP_006726570 16 5631 XP_003960511 16 5631 XP_006717414 16 5631 XP_005245386 16 5631 XP_006711512 16 5631 XP_006710283 16 5631 XP_006710282 16 5631 NP_004718 16 7355 XP_005254838 16 7355 XP_006720832 16 7355 XP_006720831 16 7355 XP_005254837 16 7355 XP_006720830 16 7355 XP_006720829 16 7355 XP_005254836 16 7355 XP_006720828 16 7355 XP_006720827 16 7355 XP_005254835 16 7355 XP_006715690 16 7355 NP_001121897 15 9605 NP_001041638 15 9605 NP_036354 15 9605 NP_001041637 15 9605 NP_001041636 15 9605 NP_001041639 15 9605 NP_003676 15 9605 NP_203129 15 9605 NP_079071 15 9605 NP_954672 15 9605 NP_835258 15 9605 NP_055379 15 9605 NP_057669 15 9605 XP_005276538 15 9605 XP_005259725 15 9605 XP_005259626 15 9605 XP_005255056 15 9605 XP_005263467 15 9605 XP_006710715 15 9605 XP_006710714 15 9605 XP_006710713 15 9605 XP_005270942 15 9605 XP_005270941 15 9605 XP_006710712 15 9605 XP_006710711 15 9605 XP_005270938 15 9605 XP_005270937 15 9605>NP_722576 Length = 3080 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 PRTTMTMQ 9 PRTTMTMQ Sbjct: 1597 PRTTMTMQ 1604>XP_005262424 Length = 2875 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 PRTTMTMQ 9 PRTTMTMQ Sbjct: 1392 PRTTMTMQ 1399>NP_078966 Length = 14507 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IPRTTMTM 8 +P TT+TM Sbjct: 2681 VPETTLTM 2688>NP_775882 Length = 433 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 PRTTMTM 8 P+TT+TM Sbjct: 262 PKTTITM 268>NP_060887 Length = 1610 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IPRTTMTM 8 +PR TMT+ Sbjct: 1450 LPRRTMTL 1457>NP_001161221 Length = 1457 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IPRTTMTM 8 +PR TMT+ Sbjct: 1297 LPRRTMTL 1304>XP_006726572 Length = 2066 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 IPR T+T Q Sbjct: 975 IPRPTITWQ 983>XP_006726571 Length = 3681 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 IPR T+T Q Sbjct: 2631 IPRPTITWQ 2639>XP_006726570 Length = 3722 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 IPR T+T Q Sbjct: 2631 IPRPTITWQ 2639>XP_003960511 Length = 3722 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 IPR T+T Q Sbjct: 2631 IPRPTITWQ 2639>XP_006717414 Length = 5100 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 IPR T+T Q Sbjct: 4009 IPRPTITWQ 4017>XP_005245386 Length = 1518 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IPRTTMTM 8 +PR TMT+ Sbjct: 1358 LPRRTMTL 1365>XP_006711512 Length = 1547 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IPRTTMTM 8 +PR TMT+ Sbjct: 1450 LPRRTMTL 1457>XP_006710283 Length = 2066 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 IPR T+T Q Sbjct: 975 IPRPTITWQ 983>XP_006710282 Length = 2621 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 IPR T+T Q Sbjct: 1530 IPRPTITWQ 1538>NP_004718 Length = 1099 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 +P T MTM+ Sbjct: 201 VPSTFMTME 209>XP_005254838 Length = 717 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 +P T MTM+ Sbjct: 201 VPSTFMTME 209>XP_006720832 Length = 935 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 +P T MTM+ Sbjct: 201 VPSTFMTME 209>XP_006720831 Length = 985 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 +P T MTM+ Sbjct: 201 VPSTFMTME 209>XP_005254837 Length = 1012 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 +P T MTM+ Sbjct: 201 VPSTFMTME 209>XP_006720830 Length = 1030 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 +P T MTM+ Sbjct: 201 VPSTFMTME 209>XP_006720829 Length = 1069 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 +P T MTM+ Sbjct: 201 VPSTFMTME 209>XP_005254836 Length = 1081 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 +P T MTM+ Sbjct: 201 VPSTFMTME 209>XP_006720828 Length = 1099 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 +P T MTM+ Sbjct: 201 VPSTFMTME 209>XP_006720827 Length = 1099 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 +P T MTM+ Sbjct: 201 VPSTFMTME 209>XP_005254835 Length = 1099 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 +P T MTM+ Sbjct: 201 VPSTFMTME 209>XP_006715690 Length = 309 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 +P TT T+Q Sbjct: 70 LPSTTATLQ 78>NP_001121897 Length = 549 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 +PRT T+Q Sbjct: 201 MPRTAETLQ 209>NP_001041638 Length = 521 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 +PRT T+Q Sbjct: 173 MPRTAETLQ 181>NP_036354 Length = 546 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 +PRT T+Q Sbjct: 198 MPRTAETLQ 206>NP_001041637 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 +PRT T+Q Sbjct: 174 MPRTAETLQ 182>NP_001041636 Length = 535 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 +PRT T+Q Sbjct: 187 MPRTAETLQ 195>NP_001041639 Length = 521 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 +PRT T+Q Sbjct: 173 MPRTAETLQ 181>NP_003676 Length = 711 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 PRTTMT 7 PRT+MT Sbjct: 141 PRTSMT 146>NP_203129 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 PRTTMT 7 PRTT+T Sbjct: 160 PRTTIT 165>NP_079071 Length = 229 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 IPRTTMTM 8 IP TTM++ Sbjct: 63 IPATTMSL 70>NP_954672 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 IPRTTMT 7 +P TTMT Sbjct: 111 LPSTTMT 117>NP_835258 Length = 397 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 PRTTMT 7 PRTT+T Sbjct: 160 PRTTIT 165>NP_055379 Length = 402 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 PRTTMT 7 PRTT+T Sbjct: 165 PRTTIT 170>NP_057669 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 IPRTTMT 7 +P TTMT Sbjct: 111 LPSTTMT 117>XP_005276538 Length = 105 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IPRTTMTM 8 I RTT+TM Sbjct: 41 INRTTVTM 48>XP_005259725 Length = 747 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 PRTTMT 7 PRT+MT Sbjct: 141 PRTSMT 146>XP_005259626 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 IPRTTMT 7 +P TTMT Sbjct: 147 LPSTTMT 153>XP_005255056 Length = 105 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 IPRTTMTM 8 I RTT+TM Sbjct: 41 INRTTVTM 48>XP_005263467 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 PRTTMT 7 PRTT+T Sbjct: 149 PRTTIT 154>XP_006710715 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 +PRT T+Q Sbjct: 58 MPRTAETLQ 66>XP_006710714 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 +PRT T+Q Sbjct: 58 MPRTAETLQ 66>XP_006710713 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 +PRT T+Q Sbjct: 58 MPRTAETLQ 66>XP_005270942 Length = 429 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 +PRT T+Q Sbjct: 81 MPRTAETLQ 89>XP_005270941 Length = 429 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 +PRT T+Q Sbjct: 81 MPRTAETLQ 89>XP_006710712 Length = 521 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 +PRT T+Q Sbjct: 173 MPRTAETLQ 181>XP_006710711 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 +PRT T+Q Sbjct: 184 MPRTAETLQ 192>XP_005270938 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 +PRT T+Q Sbjct: 184 MPRTAETLQ 192>XP_005270937 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 IPRTTMTMQ 9 +PRT T+Q Sbjct: 188 MPRTAETLQ 196Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.123 0.346 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 524,092 Number of extensions: 768 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |