Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_001129061                                                           18    1935
NP_060156                                                              18    1935
XP_005271016                                                           18    1935
NP_001273140                                                           17    3301
NP_115632                                                              17    3301
NP_054859                                                              17    4312
NP_001120679                                                           17    4312
NP_001167597                                                           17    4312
NP_001167601                                                           17    4312
NP_001167596                                                           17    4312
NP_073576                                                              17    4312
NP_001167600                                                           17    4312
NP_001186776                                                           17    4312
NP_005031                                                              17    4312
NP_955450                                                              17    4312
NP_000608                                                              17    4312
NP_001167599                                                           17    4312
NP_001167598                                                           17    4312
NP_065162                                                              17    4312
NP_851994                                                              17    4312
XP_005257642                                                           17    4312
XP_005268971                                                           17    4312
XP_005268970                                                           17    4312
XP_005268969                                                           17    4312
XP_005268968                                                           17    4312
XP_006716125                                                           17    4312
XP_006716124                                                           17    4312
XP_005250564                                                           17    4312
XP_006712620                                                           17    4312
XP_005246688                                                           17    4312
XP_005246689                                                           17    4312
NP_005950                                                              16    5631
NP_001239155                                                           16    5631
NP_006613                                                              16    5631
NP_114113                                                              16    5631
NP_653309                                                              16    5631
NP_057274                                                              16    5631
NP_066013                                                              16    5631
NP_001157101                                                           16    5631
XP_006720685                                                           16    5631
XP_006711409                                                           16    5631
NP_000305                                                              16    7355
NP_001069                                                              16    7355
NP_000876                                                              16    7355
NP_001186763                                                           16    7355
NP_542413                                                              16    7355
NP_006784                                                              16    7355
NP_056040                                                              16    7355
NP_149053                                                              16    7355
NP_054817                                                              16    7355
NP_004625                                                              16    7355
NP_001003694                                                           16    7355
XP_006717989                                                           16    7355
XP_005251811                                                           16    7355
XP_005251810                                                           16    7355
XP_005251809                                                           16    7355
XP_005251808                                                           16    7355
XP_005251807                                                           16    7355
XP_005251805                                                           16    7355
XP_005251803                                                           16    7355
XP_006717050                                                           16    7355
XP_005251802                                                           16    7355
XP_006717049                                                           16    7355
XP_006717048                                                           16    7355
XP_006717047                                                           16    7355
XP_006717046                                                           16    7355
XP_006717045                                                           16    7355
XP_005265510                                                           16    7355
XP_005265509                                                           16    7355
XP_005265508                                                           16    7355
XP_005265507                                                           16    7355
XP_005265506                                                           16    7355
XP_005264764                                                           16    7355
NP_003774                                                              16    7355
NP_057053                                                              16    7355
NP_002151                                                              15    9605
NP_055661                                                              15    9605
NP_001073289                                                           15    9605
NP_001120933                                                           15    9605
NP_899632                                                              15    9605
NP_001120934                                                           15    9605
NP_004886                                                              15    9605
NP_001230062                                                           15    9605
NP_001258590                                                           15    9605
NP_004254                     

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package