Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001261 19 869 XP_005271924 19 869 XP_005271923 19 869 NP_003600 17 3301 NP_443161 17 4312 XP_006717206 17 4312 XP_005252108 17 4312 XP_006710380 17 4312 XP_005245788 17 4312 XP_006710379 17 4312 XP_006710378 17 4312 NP_005383 17 4312 NP_001035203 16 7355 NP_074035 16 7355 NP_001035202 16 7355 NP_002465 16 7355 NP_000858 15 9605 NP_038478 15 9605 NP_001276904 15 9605 NP_056052 15 9605 NP_443143 15 9605 NP_001059 15 9605 XP_006722442 15 9605 XP_005268117 15 9605 XP_005265484 15 9605 XP_005246577 15 9605 XP_006712545 15 9605 XP_006712537 15 9605 XP_005246557 15 9605 XP_006712535 15 9605 XP_006712532 15 9605 XP_006712531 15 9605 XP_006712530 15 9605 XP_006712529 15 9605 XP_006712528 15 9605 XP_006712527 15 9605 XP_005246549 15 9605 XP_006712526 15 9605 XP_006712525 15 9605 XP_005246546 15 9605 XP_006712524 15 9605 XP_005246545 15 9605>NP_001261 Length = 1710 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KNKATKSIK 9 KNKA KSIK Sbjct: 1338 KNKAMKSIK 1346>XP_005271924 Length = 1710 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KNKATKSIK 9 KNKA KSIK Sbjct: 1338 KNKAMKSIK 1346>XP_005271923 Length = 1798 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 KNKATKSIK 9 KNKA KSIK Sbjct: 1338 KNKAMKSIK 1346>NP_003600 Length = 556 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NKATKSIK 9 NK TKS+K Sbjct: 214 NKGTKSLK 221>NP_443161 Length = 1412 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KNKATKSIK 9 K KAT+S+K Sbjct: 860 KTKATESLK 868>XP_006717206 Length = 1062 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KNKATKSI 8 K KATKS+ Sbjct: 529 KGKATKSV 536>XP_005252108 Length = 1097 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KNKATKSI 8 K KATKS+ Sbjct: 564 KGKATKSV 571>XP_006710380 Length = 1398 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KNKATKSIK 9 K KAT+S+K Sbjct: 846 KTKATESLK 854>XP_005245788 Length = 1434 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KNKATKSIK 9 K KAT+S+K Sbjct: 882 KTKATESLK 890>XP_006710379 Length = 1452 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KNKATKSIK 9 K KAT+S+K Sbjct: 882 KTKATESLK 890>XP_006710378 Length = 1478 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KNKATKSIK 9 K KAT+S+K Sbjct: 882 KTKATESLK 890>NP_005383 Length = 1096 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KNKATKSI 8 K KATKS+ Sbjct: 564 KGKATKSV 571>NP_001035203 Length = 1979 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNKATKSIK 9 K ATKS+K Sbjct: 1844 KQAATKSLK 1852>NP_074035 Length = 1938 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNKATKSIK 9 K ATKS+K Sbjct: 1837 KQAATKSLK 1845>NP_001035202 Length = 1945 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNKATKSIK 9 K ATKS+K Sbjct: 1844 KQAATKSLK 1852>NP_002465 Length = 1972 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNKATKSIK 9 K ATKS+K Sbjct: 1837 KQAATKSLK 1845>NP_000858 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KATKSIK 9 +ATKS+K Sbjct: 400 RATKSVK 406>NP_038478 Length = 2168 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NKATKSIK 9 NK T S+K Sbjct: 673 NKTTSSVK 680>NP_001276904 Length = 2132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NKATKSIK 9 NK T S+K Sbjct: 671 NKTTSSVK 678>NP_056052 Length = 1354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 KNKATKSI 8 KN +TKS+ Sbjct: 1161 KNSSTKSL 1168>NP_443143 Length = 840 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NKATKSI 8 +KATKSI Sbjct: 77 DKATKSI 83>NP_001059 Length = 1621 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNKATKSIK 9 KNKA S+K Sbjct: 360 KNKAGVSVK 368>XP_006722442 Length = 565 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NKATKSI 8 +KATKSI Sbjct: 77 DKATKSI 83>XP_005268117 Length = 272 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NKATKSIK 9 NKA +SIK Sbjct: 230 NKADESIK 237>XP_005265484 Length = 1626 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KNKATKSIK 9 KNKA S+K Sbjct: 365 KNKAGVSVK 373>XP_005246577 Length = 362 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KATKSIK 9 +ATKS+K Sbjct: 281 RATKSVK 287>XP_006712545 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KATKSIK 9 +ATKS+K Sbjct: 375 RATKSVK 381>XP_006712537 Length = 1952 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NKATKSIK 9 NK T S+K Sbjct: 673 NKTTSSVK 680>XP_005246557 Length = 2095 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NKATKSIK 9 NK T S+K Sbjct: 554 NKTTSSVK 561>XP_006712535 Length = 2095 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NKATKSIK 9 NK T S+K Sbjct: 554 NKTTSSVK 561>XP_006712532 Length = 2141 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NKATKSIK 9 NK T S+K Sbjct: 671 NKTTSSVK 678>XP_006712531 Length = 2169 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NKATKSIK 9 NK T S+K Sbjct: 673 NKTTSSVK 680>XP_006712530 Length = 2176 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NKATKSIK 9 NK T S+K Sbjct: 671 NKTTSSVK 678>XP_006712529 Length = 2179 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NKATKSIK 9 NK T S+K Sbjct: 673 NKTTSSVK 680>XP_006712528 Length = 2180 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NKATKSIK 9 NK T S+K Sbjct: 673 NKTTSSVK 680>XP_006712527 Length = 2203 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NKATKSIK 9 NK T S+K Sbjct: 673 NKTTSSVK 680>XP_005246549 Length = 2212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NKATKSIK 9 NK T S+K Sbjct: 671 NKTTSSVK 678>XP_006712526 Length = 2212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NKATKSIK 9 NK T S+K Sbjct: 671 NKTTSSVK 678>XP_006712525 Length = 2212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NKATKSIK 9 NK T S+K Sbjct: 673 NKTTSSVK 680>XP_005246546 Length = 2214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NKATKSIK 9 NK T S+K Sbjct: 673 NKTTSSVK 680>XP_006712524 Length = 2214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NKATKSIK 9 NK T S+K Sbjct: 673 NKTTSSVK 680>XP_005246545 Length = 2214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 NKATKSIK 9 NK T S+K Sbjct: 673 NKTTSSVK 680Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.289 0.104 0.236 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 317,586 Number of extensions: 412 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |