Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 19 665 NP_671714 19 665 XP_006715890 19 665 XP_005250160 19 665 XP_005250159 19 665 NP_699207 17 2528 NP_001138867 16 5631 NP_001243779 16 5631 NP_596869 16 5631 XP_006712787 16 5631 XP_006712786 16 5631 NP_001254479 16 5631 NP_001268357 16 7355 NP_036276 16 7355 NP_005237 16 7355 NP_001138537 16 7355 NP_001138775 16 7355 NP_653287 16 7355 NP_115917 16 7355 NP_001135823 16 7355 NP_002430 16 7355 XP_006721522 16 7355 XP_006716820 16 7355 XP_006716819 16 7355 XP_006716818 16 7355 XP_005271980 16 7355 XP_006714636 16 7355 XP_006714635 16 7355 XP_006712865 16 7355 XP_006712864 16 7355 NP_653282 16 7355 NP_001151733 16 7355 NP_000531 15 9605 NP_001036188 15 9605 NP_004949 15 9605 NP_065784 15 9605 XP_006723382 15 9605 XP_006723381 15 9605 XP_006723380 15 9605 XP_005247723 15 9605 XP_005263496 15 9605 XP_005263495 15 9605>NP_005742 Length = 3907 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 KVTQTELM 8 KVTQTELM Sbjct: 1872 KVTQTELM 1879>NP_671714 Length = 3899 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 KVTQTELM 8 KVTQTELM Sbjct: 1872 KVTQTELM 1879>XP_006715890 Length = 3860 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 KVTQTELM 8 KVTQTELM Sbjct: 1825 KVTQTELM 1832>XP_005250160 Length = 3939 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 KVTQTELM 8 KVTQTELM Sbjct: 1904 KVTQTELM 1911>XP_005250159 Length = 3952 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 KVTQTELM 8 KVTQTELM Sbjct: 1904 KVTQTELM 1911>NP_699207 Length = 555 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 KVTQTELMH 9 KV +TEL+H Sbjct: 514 KVDKTELLH 522>NP_001138867 Length = 402 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 KVTQTELMH 9 KVTQ +L H Sbjct: 390 KVTQHQLCH 398>NP_001243779 Length = 34350 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KVTQTELMH 9 K+ QT+L H Sbjct: 7160 KILQTDLSH 7168>NP_596869 Length = 33423 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KVTQTELMH 9 K+ QT+L H Sbjct: 6233 KILQTDLSH 6241>XP_006712787 Length = 33978 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KVTQTELMH 9 K+ QT+L H Sbjct: 7161 KILQTDLSH 7169>XP_006712786 Length = 35484 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KVTQTELMH 9 K+ QT+L H Sbjct: 7161 KILQTDLSH 7169>NP_001254479 Length = 35991 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KVTQTELMH 9 K+ QT+L H Sbjct: 7477 KILQTDLSH 7485>NP_001268357 Length = 703 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVTQTELM 8 KVT+ ELM Sbjct: 175 KVTEEELM 182>NP_036276 Length = 699 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVTQTELM 8 KVT+ ELM Sbjct: 171 KVTEEELM 178>NP_005237 Length = 822 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KVTQTEL 7 KVT+TEL Sbjct: 127 KVTKTEL 133>NP_001138537 Length = 900 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVTQTELM 8 K TQTEL+ Sbjct: 714 KSTQTELL 721>NP_001138775 Length = 712 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KVTQTEL 7 +VTQTEL Sbjct: 78 EVTQTEL 84>NP_653287 Length = 706 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KVTQTEL 7 +VTQTEL Sbjct: 72 EVTQTEL 78>NP_115917 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VTQTELMH 9 V QTEL H Sbjct: 460 VRQTELCH 467>NP_001135823 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VTQTELMH 9 V QTEL H Sbjct: 460 VRQTELCH 467>NP_002430 Length = 1137 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 TQTELMH 9 TQT L+H Sbjct: 1131 TQTSLLH 1137>XP_006721522 Length = 316 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KVTQTELMH 9 K +TE+MH Sbjct: 47 KKKETEIMH 55>XP_006716820 Length = 673 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVTQTELM 8 KVT+ ELM Sbjct: 206 KVTEEELM 213>XP_006716819 Length = 730 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVTQTELM 8 KVT+ ELM Sbjct: 202 KVTEEELM 209>XP_006716818 Length = 734 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVTQTELM 8 KVT+ ELM Sbjct: 206 KVTEEELM 213>XP_005271980 Length = 749 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KVTQTEL 7 KVT+TEL Sbjct: 54 KVTKTEL 60>XP_006714636 Length = 822 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KVTQTEL 7 KVT+TEL Sbjct: 127 KVTKTEL 133>XP_006714635 Length = 822 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 KVTQTEL 7 KVT+TEL Sbjct: 127 KVTKTEL 133>XP_006712865 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VTQTELMH 9 V QTEL H Sbjct: 460 VRQTELCH 467>XP_006712864 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VTQTELMH 9 V QTEL H Sbjct: 460 VRQTELCH 467>NP_653282 Length = 316 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KVTQTELMH 9 K +TE+MH Sbjct: 47 KKKETEIMH 55>NP_001151733 Length = 242 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 KVTQTELMH 9 K +TE+MH Sbjct: 47 KKKETEIMH 55>NP_000531 Length = 5038 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVTQTELM 8 KVT TEL+ Sbjct: 4373 KVTVTELL 4380>NP_001036188 Length = 5033 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVTQTELM 8 KVT TEL+ Sbjct: 4368 KVTVTELL 4375>NP_004949 Length = 2549 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KVTQTELMH 9 ++TQ +L+H Sbjct: 288 EITQQQLVH 296>NP_065784 Length = 1381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VTQTELMH 9 V+QT+ MH Sbjct: 323 VSQTKTMH 330>XP_006723382 Length = 5027 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVTQTELM 8 KVT TEL+ Sbjct: 4362 KVTVTELL 4369>XP_006723381 Length = 5031 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVTQTELM 8 KVT TEL+ Sbjct: 4366 KVTVTELL 4373>XP_006723380 Length = 5032 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 KVTQTELM 8 KVT TEL+ Sbjct: 4367 KVTVTELL 4374>XP_005247723 Length = 1481 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VTQTELMH 9 V+QT+ MH Sbjct: 323 VSQTKTMH 330>XP_005263496 Length = 2322 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KVTQTELMH 9 ++TQ +L+H Sbjct: 61 EITQQQLVH 69>XP_005263495 Length = 2549 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 KVTQTELMH 9 ++TQ +L+H Sbjct: 288 EITQQQLVH 296Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.118 0.311 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 436,309 Number of extensions: 803 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |