Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_008835                                                              20     390
NP_001075109                                                           20     390
NP_775771                                                              17    4312
NP_078880                                                              17    4312
NP_001139547                                                           17    4312
NP_001139548                                                           17    4312
XP_006720466                                                           17    4312
XP_005254230                                                           17    4312
XP_006720465                                                           17    4312
XP_005254228                                                           17    4312
NP_078782                                                              16    5631
NP_001273352                                                           16    5631
NP_003493                                                              16    5631
NP_851393                                                              16    5631
NP_004646                                                              16    5631
NP_001363                                                              16    5631
XP_005257776                                                           16    5631
XP_005255667                                                           16    5631
XP_005255666                                                           16    5631
XP_005255665                                                           16    5631
XP_005255664                                                           16    5631
XP_005246907                                                           16    5631
NP_004653                                                              16    5631
NP_002038                                                              16    7355
NP_064425                                                              16    7355
NP_001001290                                                           16    7355
XP_006715749                                                           16    7355
XP_006714032                                                           16    7355
XP_006714031                                                           16    7355
NP_005623                                                              15    9605
NP_001273767                                                           15    9605
NP_001501                                                              15    9605
NP_001192222                                                           15    9605
NP_001192223                                                           15    9605
NP_000712                                                              15    9605
NP_064506                                                              15    9605
NP_001011703                                                           15    9605
NP_258257                                                              15    9605
NP_115524                                                              15    9605
XP_005255575                                                           15    9605
XP_005255574                                                           15    9605
XP_005255573                                                           15    9605
XP_006720998                                                           15    9605
XP_005255571                                                           15    9605
XP_006720997                                                           15    9605
XP_006720996                                                           15    9605
XP_006720995                                                           15    9605
XP_006720994                                                           15    9605
XP_005269237                                                           15    9605
XP_005269236                                                           15    9605
XP_005269235                                                           15    9605
XP_006719693                                                           15    9605
XP_005269233                                                           15    9605
XP_005252354                                                           15    9605
XP_006714258                                                           15    9605
>NP_008835
          Length = 4128

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LFRTFLGEL 9
           LFR FLGEL
Sbjct: 196 LFRAFLGEL 204
>NP_001075109
          Length = 4097

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   LFRTFLGEL 9
           LFR FLGEL
Sbjct: 196 LFRAFLGEL 204
>NP_775771
          Length = 1244

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   FRTFLGEL 9
           F++FLG+L
Sbjct: 988 FKSFLGDL 995
>NP_078880
          Length = 665

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   RTFLGEL 9
           RTFLG+L
Sbjct: 360 RTFLGKL 366
>NP_001139547
          Length = 631

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   RTFLGEL 9
           RTFLG+L
Sbjct: 360 RTFLGKL 366
>NP_001139548
          Length = 506

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   RTFLGEL 9
           RTFLG+L
Sbjct: 201 RTFLGKL 207
>XP_006720466
          Length = 1175

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   FRTFLGEL 9
           F++FLG+L
Sbjct: 919 FKSFLGDL 926
>XP_005254230
          Length = 1175

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   FRTFLGEL 9
           F++FLG+L
Sbjct: 919 FKSFLGDL 926
>XP_006720465
          Length = 1239

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   FRTFLGEL 9
           F++FLG+L
Sbjct: 983 FKSFLGDL 990
>XP_005254228
          Length = 1250

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2    FRTFLGEL 9
            F++FLG+L
Sbjct: 994  FKSFLGDL 1001
>NP_078782
          Length = 654

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   LFRTFLGE 8
           LFR  LGE
Sbjct: 204 LFRALLGE 211
>NP_001273352
          Length = 654

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   LFRTFLGE 8
           LFR  LGE
Sbjct: 204 LFRALLGE 211
>NP_003493
          Length = 862

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   LFRTFL 6
           LFRTFL
Sbjct: 101 LFRTFL 106
>NP_851393
          Length = 826

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   LFRTFL 6
           LFRTFL
Sbjct: 101 LFRTFL 106
>NP_004646
          Length = 843

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1  LFRTFL 6
          LFRTFL
Sbjct: 94 LFRTFL 99
>NP_001363
          Length = 4486

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    LFRTFLGE 8
            L RT+LGE
Sbjct: 4126 LCRTYLGE 4133
>XP_005257776
          Length = 778

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1  LFRTFL 6
          LFRTFL
Sbjct: 94 LFRTFL 99
>XP_005255667
          Length = 473

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   LFRTFL 6
           LFRTFL
Sbjct: 150 LFRTFL 155
>XP_005255666
          Length = 862

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   LFRTFL 6
           LFRTFL
Sbjct: 101 LFRTFL 106
>XP_005255665
          Length = 875

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   LFRTFL 6
           LFRTFL
Sbjct: 150 LFRTFL 155
>XP_005255664
          Length = 911

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   LFRTFL 6
           LFRTFL
Sbjct: 150 LFRTFL 155
>XP_005246907
          Length = 654

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   LFRTFLGE 8
           LFR  LGE
Sbjct: 204 LFRALLGE 211
>NP_004653
          Length = 798

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   LFRTFLGE 8
           L RT+LGE
Sbjct: 438 LCRTYLGE 445
>NP_002038
          Length = 739

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   LFRTFLG 7
           +F+TF+G
Sbjct: 281 MFKTFIG 287
>NP_064425
          Length = 540

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   FRTFLGE 8
           F+TFLG+
Sbjct: 273 FQTFLGK 279
>NP_001001290
          Length = 511

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   FRTFLGE 8
           F+TFLG+
Sbjct: 244 FQTFLGK 250
>XP_006715749
          Length = 616

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   LFRTFLG 7
           +F+TF+G
Sbjct: 158 MFKTFIG 164
>XP_006714032
          Length = 423

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   FRTFLGE 8
           F+TFLG+
Sbjct: 244 FQTFLGK 250
>XP_006714031
          Length = 563

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   FRTFLGE 8
           F+TFLG+
Sbjct: 273 FQTFLGK 279
>NP_005623
          Length = 1086

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2  FRTFLGE 8
          FR FLG+
Sbjct: 55 FRNFLGK 61
>NP_001273767
          Length = 912

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  LFRTFLGEL 9
          +FRT +G+L
Sbjct: 43 VFRTAVGDL 51
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