Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 509 XP_005271621 20 509 XP_006718907 20 509 XP_006718906 20 509 XP_005271619 20 509 XP_005271618 20 509 NP_055730 17 4312 NP_001242982 17 4312 NP_001166953 17 4312 NP_057386 17 4312 NP_001243301 17 4312 NP_001243300 17 4312 NP_078956 17 4312 XP_006717495 17 4312 XP_006717494 17 4312 XP_006717493 17 4312 XP_006717492 17 4312 XP_006717491 17 4312 XP_006717490 17 4312 XP_006717489 17 4312 XP_006717488 17 4312 XP_006717487 17 4312 XP_006717486 17 4312 NP_001177951 16 5631 NP_006556 16 5631 NP_073609 16 5631 NP_001009612 16 5631 XP_005255832 16 5631 XP_006718339 16 5631 XP_006718338 16 5631 XP_006718337 16 5631 XP_006718336 16 5631 NP_001257903 16 7355 NP_001271159 16 7355 NP_001076593 16 7355 XP_006721269 16 7355 XP_006720213 16 7355 XP_006720212 16 7355 XP_005267740 16 7355 XP_005272574 16 7355 NP_001035203 15 9605 NP_074035 15 9605 NP_001035202 15 9605 NP_002465 15 9605 NP_002833 15 9605 NP_001154912 15 9605 NP_001092880 15 9605 NP_001092881 15 9605 NP_055525 15 9605 NP_001171656 15 9605 NP_653088 15 9605 NP_001091995 15 9605 NP_060674 15 9605 NP_001268360 15 9605 XP_006723375 15 9605 XP_005254442 15 9605 XP_005266401 15 9605 XP_005266400 15 9605 XP_005270453 15 9605 XP_005270452 15 9605 XP_005270451 15 9605 NP_002364 15 9605 NP_006836 15 9605 NP_001273616 15 9605 NP_001273615 15 9605 NP_009127 15 9605>NP_000042 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LMQVEDQSS 9 LM+VEDQSS Sbjct: 846 LMEVEDQSS 854>XP_005271621 Length = 2708 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LMQVEDQSS 9 LM+VEDQSS Sbjct: 498 LMEVEDQSS 506>XP_006718907 Length = 3050 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LMQVEDQSS 9 LM+VEDQSS Sbjct: 846 LMEVEDQSS 854>XP_006718906 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LMQVEDQSS 9 LM+VEDQSS Sbjct: 846 LMEVEDQSS 854>XP_005271619 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LMQVEDQSS 9 LM+VEDQSS Sbjct: 846 LMEVEDQSS 854>XP_005271618 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LMQVEDQSS 9 LM+VEDQSS Sbjct: 846 LMEVEDQSS 854>NP_055730 Length = 1710 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LMQVEDQSS 9 L+QV+D SS Sbjct: 644 LLQVDDDSS 652>NP_001242982 Length = 1709 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LMQVEDQSS 9 L+QV+D SS Sbjct: 643 LLQVDDDSS 651>NP_001166953 Length = 441 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MQVEDQSS 9 M+VEDQ S Sbjct: 30 MEVEDQDS 37>NP_057386 Length = 442 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MQVEDQSS 9 M+VEDQ S Sbjct: 31 MEVEDQDS 38>NP_001243301 Length = 867 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 MQVEDQSS 9 MQ+E+QSS Sbjct: 446 MQLEEQSS 453>NP_001243300 Length = 867 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 MQVEDQSS 9 MQ+E+QSS Sbjct: 446 MQLEEQSS 453>NP_078956 Length = 867 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 MQVEDQSS 9 MQ+E+QSS Sbjct: 446 MQLEEQSS 453>XP_006717495 Length = 1037 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LMQVEDQSS 9 L+QV+D SS Sbjct: 1006 LLQVDDDSS 1014>XP_006717494 Length = 1571 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LMQVEDQSS 9 L+QV+D SS Sbjct: 505 LLQVDDDSS 513>XP_006717493 Length = 1610 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LMQVEDQSS 9 L+QV+D SS Sbjct: 544 LLQVDDDSS 552>XP_006717492 Length = 1635 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LMQVEDQSS 9 L+QV+D SS Sbjct: 1006 LLQVDDDSS 1014>XP_006717491 Length = 1677 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LMQVEDQSS 9 L+QV+D SS Sbjct: 611 LLQVDDDSS 619>XP_006717490 Length = 1791 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LMQVEDQSS 9 L+QV+D SS Sbjct: 725 LLQVDDDSS 733>XP_006717489 Length = 1945 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LMQVEDQSS 9 L+QV+D SS Sbjct: 1006 LLQVDDDSS 1014>XP_006717488 Length = 2031 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LMQVEDQSS 9 L+QV+D SS Sbjct: 1006 LLQVDDDSS 1014>XP_006717487 Length = 2071 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LMQVEDQSS 9 L+QV+D SS Sbjct: 1005 LLQVDDDSS 1013>XP_006717486 Length = 2072 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LMQVEDQSS 9 L+QV+D SS Sbjct: 1006 LLQVDDDSS 1014>NP_001177951 Length = 399 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LMQVEDQSS 9 ++QVEDQ++ Sbjct: 342 IIQVEDQNT 350>NP_006556 Length = 727 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LMQVEDQSS 9 ++QVEDQ++ Sbjct: 670 IIQVEDQNT 678>NP_073609 Length = 715 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LMQVEDQS 8 L+QV DQS Sbjct: 93 LLQVNDQS 100>NP_001009612 Length = 122 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MQVEDQS 8 MQ++DQS Sbjct: 48 MQIQDQS 54>XP_005255832 Length = 725 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LMQVEDQSS 9 ++QVEDQ++ Sbjct: 668 IIQVEDQNT 676>XP_006718339 Length = 546 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LMQVEDQS 8 L+QV DQS Sbjct: 93 LLQVNDQS 100>XP_006718338 Length = 715 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LMQVEDQS 8 L+QV DQS Sbjct: 93 LLQVNDQS 100>XP_006718337 Length = 715 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LMQVEDQS 8 L+QV DQS Sbjct: 93 LLQVNDQS 100>XP_006718336 Length = 715 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LMQVEDQS 8 L+QV DQS Sbjct: 93 LLQVNDQS 100>NP_001257903 Length = 5121 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QVEDQSS 9 QVEDQ S Sbjct: 1306 QVEDQES 1312>NP_001271159 Length = 1104 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LMQVEDQSS 9 LM++ED+ S Sbjct: 672 LMEMEDEDS 680>NP_001076593 Length = 1347 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LMQVEDQS 8 LMQ++D+S Sbjct: 623 LMQLQDES 630>XP_006721269 Length = 5138 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QVEDQSS 9 QVEDQ S Sbjct: 1323 QVEDQES 1329>XP_006720213 Length = 933 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LMQVEDQSS 9 LM++ED+ S Sbjct: 501 LMEMEDEDS 509>XP_006720212 Length = 956 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LMQVEDQSS 9 LM++ED+ S Sbjct: 524 LMEMEDEDS 532>XP_005267740 Length = 1081 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LMQVEDQSS 9 LM++ED+ S Sbjct: 649 LMEMEDEDS 657>XP_005272574 Length = 1207 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LMQVEDQS 8 LMQ++D+S Sbjct: 483 LMQLQDES 490>NP_001035203 Length = 1979 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LMQVEDQ 7 L+QVED+ Sbjct: 1862 LLQVEDE 1868>NP_074035 Length = 1938 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LMQVEDQ 7 L+QVED+ Sbjct: 1855 LLQVEDE 1861>NP_001035202 Length = 1945 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LMQVEDQ 7 L+QVED+ Sbjct: 1862 LLQVEDE 1868>NP_002465 Length = 1972 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LMQVEDQ 7 L+QVED+ Sbjct: 1855 LLQVEDE 1861>NP_002833 Length = 1115 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LMQVEDQSS 9 L+QVE+Q + Sbjct: 965 LLQVEEQKT 973>NP_001154912 Length = 937 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LMQVEDQSS 9 L+QVE+Q + Sbjct: 787 LLQVEEQKT 795>NP_001092880 Length = 1395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MQVEDQS 8 +QVED+S Sbjct: 427 LQVEDES 433>NP_001092881 Length = 1395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MQVEDQS 8 +QVED+S Sbjct: 427 LQVEDES 433>NP_055525 Length = 1395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MQVEDQS 8 +QVED+S Sbjct: 427 LQVEDES 433>NP_001171656 Length = 1395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MQVEDQS 8 +QVED+S Sbjct: 427 LQVEDES 433>NP_653088 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LMQVEDQSS 9 L+Q+ DQ+S Sbjct: 168 LLQLRDQAS 176>NP_001091995 Length = 683 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MQVEDQSS 9 +QV+D+SS Sbjct: 195 LQVKDESS 202>NP_060674 Length = 682 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MQVEDQSS 9 +QV+D+SS Sbjct: 194 LQVKDESS 201>NP_001268360 Length = 139 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LMQVEDQSS 9 L+Q+ DQ+S Sbjct: 2 LLQLRDQAS 10>XP_006723375 Length = 1137 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LMQVEDQSS 9 L+QVE+Q + Sbjct: 987 LLQVEEQKT 995>XP_005254442 Length = 3041 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LMQVEDQS 8 LMQ ED S Sbjct: 1478 LMQAEDTS 1485>XP_005266401 Length = 635 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MQVEDQSS 9 +QV+D+SS Sbjct: 147 LQVKDESS 154>XP_005266400 Length = 677 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MQVEDQSS 9 +QV+D+SS Sbjct: 189 LQVKDESS 196>XP_005270453 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MQVEDQSS 9 MQ+E+Q+S Sbjct: 654 MQLEEQAS 661>XP_005270452 Length = 684 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MQVEDQSS 9 MQ+E+Q+S Sbjct: 667 MQLEEQAS 674>XP_005270451 Length = 716 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MQVEDQSS 9 MQ+E+Q+S Sbjct: 699 MQLEEQAS 706>NP_002364 Length = 2803 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LMQVEDQS 8 LMQ ED S Sbjct: 1240 LMQAEDTS 1247>NP_006836 Length = 725 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MQVEDQSS 9 MQ+E+Q+S Sbjct: 708 MQLEEQAS 715>NP_001273616 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MQVEDQSS 9 +QV+D+SS Sbjct: 194 LQVKDESS 201>NP_001273615 Length = 634 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MQVEDQSS 9 +QV+D+SS Sbjct: 146 LQVKDESS 153>NP_009127 Length = 260 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LMQVEDQSS 9 L+Q+ DQ+S Sbjct: 123 LLQLRDQAS 131Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.298 0.111 0.248 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 520,475 Number of extensions: 633 Number of successful extensions: 66 Number of sequences better than 10000.0: 66 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |