Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004110 18 1135 NP_000436 16 5631 NP_958780 16 5631 NP_958781 16 5631 NP_958785 16 5631 NP_958783 16 5631 NP_958786 16 5631 NP_958782 16 5631 NP_958784 16 5631 NP_001277074 16 5631 NP_056399 16 5631 XP_006716654 16 5631 XP_005251041 16 5631 XP_005251040 16 5631 XP_006716653 16 5631 XP_006716652 16 5631 XP_005251039 16 5631 XP_005251038 16 5631 XP_005251036 16 5631 XP_005251037 16 5631 XP_005251035 16 5631 XP_006716651 16 5631 XP_005251034 16 5631 XP_005251033 16 5631 NP_001004480 16 5631 NP_071436 16 7355 NP_003473 15 9605 NP_597703 15 9605 NP_001278308 15 9605 NP_001263272 15 9605 NP_001278253 15 9605 NP_001252543 15 9605 NP_001006643 15 9605 NP_001139813 15 9605 NP_001137472 15 9605 NP_001167560 15 9605 NP_004183 15 9605 NP_001277140 15 9605 NP_001010855 15 9605 NP_001177739 15 9605 NP_114423 15 9605 NP_001167561 15 9605 NP_001166945 15 9605 NP_001166944 15 9605 NP_937870 15 9605 NP_937872 15 9605 NP_001071153 15 9605 XP_005276439 15 9605 XP_005276438 15 9605 XP_006726583 15 9605 XP_005274840 15 9605 XP_005274491 15 9605 XP_005260914 15 9605 XP_005260913 15 9605 XP_006722053 15 9605 XP_006722052 15 9605 XP_006719679 15 9605 XP_005269219 15 9605 XP_006719678 15 9605 XP_006719677 15 9605 XP_006718155 15 9605 XP_006717897 15 9605 XP_006717896 15 9605 XP_006717685 15 9605 XP_005271857 15 9605 XP_006717684 15 9605 XP_006717682 15 9605 XP_005271854 15 9605 XP_006713970 15 9605 XP_006713968 15 9605 XP_006710001 15 9605 NP_597704 15 9605>NP_004110 Length = 993 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MHGSREVQI 9 M GSREVQI Sbjct: 737 MPGSREVQI 745>NP_000436 Length = 4574 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HGSREVQI 9 HG R+V++ Sbjct: 1194 HGERDVEV 1201>NP_958780 Length = 4533 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HGSREVQI 9 HG R+V++ Sbjct: 1153 HGERDVEV 1160>NP_958781 Length = 4525 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HGSREVQI 9 HG R+V++ Sbjct: 1145 HGERDVEV 1152>NP_958785 Length = 4551 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HGSREVQI 9 HG R+V++ Sbjct: 1171 HGERDVEV 1178>NP_958783 Length = 4515 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HGSREVQI 9 HG R+V++ Sbjct: 1135 HGERDVEV 1142>NP_958786 Length = 4547 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HGSREVQI 9 HG R+V++ Sbjct: 1167 HGERDVEV 1174>NP_958782 Length = 4684 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HGSREVQI 9 HG R+V++ Sbjct: 1304 HGERDVEV 1311>NP_958784 Length = 4547 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HGSREVQI 9 HG R+V++ Sbjct: 1167 HGERDVEV 1174>NP_001277074 Length = 350 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 HGSREVQ 8 HGS+EV+ Sbjct: 103 HGSKEVK 109>NP_056399 Length = 368 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 HGSREVQ 8 HGS+EV+ Sbjct: 121 HGSKEVK 127>XP_006716654 Length = 3562 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HGSREVQI 9 HG R+V++ Sbjct: 1309 HGERDVEV 1316>XP_005251041 Length = 4520 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HGSREVQI 9 HG R+V++ Sbjct: 1140 HGERDVEV 1147>XP_005251040 Length = 4524 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HGSREVQI 9 HG R+V++ Sbjct: 1144 HGERDVEV 1151>XP_006716653 Length = 4529 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HGSREVQI 9 HG R+V++ Sbjct: 1149 HGERDVEV 1156>XP_006716652 Length = 4529 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HGSREVQI 9 HG R+V++ Sbjct: 1149 HGERDVEV 1156>XP_005251039 Length = 4530 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HGSREVQI 9 HG R+V++ Sbjct: 1150 HGERDVEV 1157>XP_005251038 Length = 4538 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HGSREVQI 9 HG R+V++ Sbjct: 1158 HGERDVEV 1165>XP_005251036 Length = 4552 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HGSREVQI 9 HG R+V++ Sbjct: 1172 HGERDVEV 1179>XP_005251037 Length = 4552 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HGSREVQI 9 HG R+V++ Sbjct: 1172 HGERDVEV 1179>XP_005251035 Length = 4556 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HGSREVQI 9 HG R+V++ Sbjct: 1176 HGERDVEV 1183>XP_006716651 Length = 4579 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HGSREVQI 9 HG R+V++ Sbjct: 1199 HGERDVEV 1206>XP_005251034 Length = 4685 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HGSREVQI 9 HG R+V++ Sbjct: 1305 HGERDVEV 1312>XP_005251033 Length = 4689 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HGSREVQI 9 HG R+V++ Sbjct: 1309 HGERDVEV 1316>NP_001004480 Length = 330 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HGSREVQ 8 HG RE+Q Sbjct: 36 HGQREMQ 42>NP_071436 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 MHGSREVQI 9 +HG+ E+Q+ Sbjct: 160 VHGAMELQV 168>NP_003473 Length = 5537 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 MHGSREVQ 8 +HG RE++ Sbjct: 76 LHGQRELR 83>NP_597703 Length = 663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HGSRE 6 HGSRE Sbjct: 586 HGSRE 590>NP_001278308 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HGSRE 6 HGSRE Sbjct: 501 HGSRE 505>NP_001263272 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HGSRE 6 HGSRE Sbjct: 609 HGSRE 613>NP_001278253 Length = 2639 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HGSRE 6 HGSRE Sbjct: 1630 HGSRE 1634>NP_001252543 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HGSRE 6 HGSRE Sbjct: 19 HGSRE 23>NP_001006643 Length = 489 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HGSRE 6 HGSRE Sbjct: 19 HGSRE 23>NP_001139813 Length = 535 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HGSRE 6 HGSRE Sbjct: 417 HGSRE 421>NP_001137472 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HGSRE 6 HGSRE Sbjct: 609 HGSRE 613>NP_001167560 Length = 875 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HGSREVQI 9 HG RE+++ Sbjct: 610 HGFREIEM 617>NP_004183 Length = 621 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 MHGSREVQI 9 +HG +VQ+ Sbjct: 596 LHGFHQVQV 604>NP_001277140 Length = 618 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 MHGSREVQ 8 +HG +EV+ Sbjct: 590 LHGQQEVE 597>NP_001010855 Length = 754 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 MHGSREVQ 8 +HG +EV+ Sbjct: 726 LHGQQEVE 733>NP_001177739 Length = 658 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HGSRE 6 HGSRE Sbjct: 609 HGSRE 613>NP_114423 Length = 891 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HGSREVQI 9 HG RE+++ Sbjct: 626 HGFREIEM 633>NP_001167561 Length = 918 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HGSREVQI 9 HG RE+++ Sbjct: 653 HGFREIEM 660>NP_001166945 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 MHGSREVQI 9 +HG +VQ+ Sbjct: 580 LHGFHQVQV 588>NP_001166944 Length = 563 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 MHGSREVQI 9 +HG +VQ+ Sbjct: 538 LHGFHQVQV 546>NP_937870 Length = 799 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HGSREVQI 9 HGSR++ + Sbjct: 728 HGSRDLPV 735>NP_937872 Length = 1447 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HGSREVQI 9 HGSR++ + Sbjct: 1376 HGSRDLPV 1383>NP_001071153 Length = 663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HGSRE 6 HGSRE Sbjct: 586 HGSRE 590>XP_005276439 Length = 663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HGSRE 6 HGSRE Sbjct: 586 HGSRE 590>XP_005276438 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HGSRE 6 HGSRE Sbjct: 609 HGSRE 613>XP_006726583 Length = 485 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HGSRE 6 HGSRE Sbjct: 408 HGSRE 412>XP_005274840 Length = 621 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 MHGSREVQI 9 +HG +VQ+ Sbjct: 596 LHGFHQVQV 604>XP_005274491 Length = 621 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 MHGSREVQI 9 +HG +VQ+ Sbjct: 596 LHGFHQVQV 604>XP_005260914 Length = 856 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HGSREVQI 9 HG RE+++ Sbjct: 591 HGFREIEM 598>XP_005260913 Length = 998 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HGSREVQI 9 HG RE+++ Sbjct: 733 HGFREIEM 740>XP_006722053 Length = 2608 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HGSRE 6 HGSRE Sbjct: 1599 HGSRE 1603>XP_006722052 Length = 2631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HGSRE 6 HGSRE Sbjct: 1630 HGSRE 1634>XP_006719679 Length = 5536 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 MHGSREVQ 8 +HG RE++ Sbjct: 76 LHGQRELR 83>XP_005269219 Length = 5537 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 MHGSREVQ 8 +HG RE++ Sbjct: 76 LHGQRELR 83>XP_006719678 Length = 5539 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 MHGSREVQ 8 +HG RE++ Sbjct: 76 LHGQRELR 83>XP_006719677 Length = 5540 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 MHGSREVQ 8 +HG RE++ Sbjct: 76 LHGQRELR 83>XP_006718155 Length = 485 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HGSRE 6 HGSRE Sbjct: 408 HGSRE 412>XP_006717897 Length = 1160 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 MHGSREV 7 M GSRE+ Sbjct: 4 MEGSREI 10>XP_006717896 Length = 1186 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 MHGSREV 7 M GSRE+ Sbjct: 30 MEGSREI 36>XP_006717685 Length = 647 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HGSRE 6 HGSRE Sbjct: 570 HGSRE 574>XP_005271857 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HGSRE 6 HGSRE Sbjct: 609 HGSRE 613>XP_006717684 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HGSRE 6 HGSRE Sbjct: 609 HGSRE 613>XP_006717682 Length = 716 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HGSRE 6 HGSRE Sbjct: 639 HGSRE 643>XP_005271854 Length = 739 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HGSRE 6 HGSRE Sbjct: 662 HGSRE 666>XP_006713970 Length = 646 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HGSREVQI 9 HGSR++ + Sbjct: 575 HGSRDLPV 582>XP_006713968 Length = 1447 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 HGSREVQI 9 HGSR++ + Sbjct: 1376 HGSRDLPV 1383>XP_006710001 Length = 173 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HGSRE 6 HGSRE Sbjct: 96 HGSRE 100>NP_597704 Length = 550 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 HGSRE 6 HGSRE Sbjct: 473 HGSRE 477Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.132 0.367 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 586,866 Number of extensions: 709 Number of successful extensions: 72 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |