Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

• Home Page
• Cancer-specific
• Epitope Search
• Data Retrieval
• Browse Gene
• Browse Tissue
• Sequence Similarity
• Partially Personalized
• Submit a Protein
• Vaccine Target
• Proteome Data
• NGS data
• BLAST & Predict
• Fully Personalized
• Proteins Pair
• Proteome Pair
• Advanced Tools
• Epitope Mapping
• Cross Reactivity
• Important Information
• Acknowledgement
• Algorithm
• Help
• Developers
• Contact

Blast-Search of mutated query peptide against human proteome

Score = 17.7 bits (34), Expect = 1935 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 NNKNCINI 8 NN+NC+++ Sbjct: 280 NNRNCLSL 287

>NP_150649
          Length = 321

 Score = 17.7 bits (34), Expect =  1935
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 1   NNKNCINI 8
           NN+NC+++
Sbjct: 183 NNRNCLSL 190

>NP_115737
          Length = 351

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   NNKNCINIL 9
           N   CINIL
Sbjct: 201 NGNGCINIL 209

>NP_689688
          Length = 575

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   NKNCINI 8
           NKNC+ I
Sbjct: 475 NKNCVTI 481

>NP_001182073
          Length = 993

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   NKNCINIL 9
           N+NCI +L
Sbjct: 784 NENCIEVL 791

>XP_006723092
          Length = 574

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   NKNCINI 8
           NKNC+ I
Sbjct: 474 NKNCVTI 480

>XP_005247005
          Length = 994

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   NKNCINIL 9
           N+NCI +L
Sbjct: 802 NENCIEVL 809

>XP_006712901
          Length = 997

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   NKNCINIL 9
           N+NCI +L
Sbjct: 802 NENCIEVL 809

>XP_005247004
          Length = 1011

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   NKNCINIL 9
           N+NCI +L
Sbjct: 802 NENCIEVL 809

>XP_005247003
          Length = 1056

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   NKNCINIL 9
           N+NCI +L
Sbjct: 784 NENCIEVL 791

>XP_005247002
          Length = 1074

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   NKNCINIL 9
           N+NCI +L
Sbjct: 802 NENCIEVL 809

>NP_742056
          Length = 557

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   NCINIL 9
           NC+NIL
Sbjct: 459 NCVNIL 464

>NP_001275504
          Length = 470

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   NCINIL 9
           NC+NIL
Sbjct: 372 NCVNIL 377

>NP_001275503
          Length = 586

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   NCINIL 9
           NC+NIL
Sbjct: 488 NCVNIL 493

>NP_742055
          Length = 592

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   NCINIL 9
           NC+NIL
Sbjct: 494 NCVNIL 499

>NP_742057
          Length = 559

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   NCINIL 9
           NC+NIL
Sbjct: 461 NCVNIL 466

>NP_000494
          Length = 592

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   NCINIL 9
           NC+NIL
Sbjct: 494 NCVNIL 499

>NP_004091
          Length = 639

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   NCINIL 9
           NCIN+L
Sbjct: 541 NCINVL 546

>NP_742103
          Length = 639

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Posit