Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001121619 18 1135 NP_000258 18 1135 NP_001035957 18 1135 XP_006721991 18 1135 XP_006721990 18 1135 XP_006721989 18 1135 XP_005258041 18 1135 XP_006721988 18 1135 XP_006721987 18 1135 XP_006721986 18 1135 XP_005258040 18 1135 XP_006721985 18 1135 NP_001269828 17 3301 NP_001093867 17 3301 NP_008954 17 3301 NP_065880 17 3301 NP_001129392 17 3301 NP_001193486 17 3301 XP_005251580 17 3301 XP_006712269 17 3301 NP_115495 16 5631 NP_208325 16 5631 XP_005251374 16 5631 NP_919269 16 7355 XP_005264966 16 7355 NP_077312 15 9605 NP_078966 15 9605 NP_001265561 15 9605 NP_001265564 15 9605 NP_001265562 15 9605 NP_001265563 15 9605 NP_114095 15 9605 NP_057442 15 9605 NP_077313 15 9605 NP_001009959 15 9605 NP_065762 15 9605 NP_005844 15 9605 NP_001239126 15 9605 XP_005256196 15 9605 XP_005256195 15 9605 XP_005256194 15 9605 XP_006714539 15 9605 XP_006714119 15 9605 NP_001127694 15 9605 NP_786924 15 9605 NP_001035194 15 9605 NP_150366 15 9605 NP_077311 15 9605>NP_001121619 Length = 593 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTLTKVSTE 9 NT TKVSTE Sbjct: 29 NTHTKVSTE 37>NP_000258 Length = 2818 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTLTKVSTE 9 NT TKVSTE Sbjct: 29 NTHTKVSTE 37>NP_001035957 Length = 2839 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTLTKVSTE 9 NT TKVSTE Sbjct: 29 NTHTKVSTE 37>XP_006721991 Length = 1632 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTLTKVSTE 9 NT TKVSTE Sbjct: 29 NTHTKVSTE 37>XP_006721990 Length = 2823 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTLTKVSTE 9 NT TKVSTE Sbjct: 29 NTHTKVSTE 37>XP_006721989 Length = 2823 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTLTKVSTE 9 NT TKVSTE Sbjct: 29 NTHTKVSTE 37>XP_005258041 Length = 2836 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTLTKVSTE 9 NT TKVSTE Sbjct: 29 NTHTKVSTE 37>XP_006721988 Length = 2846 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTLTKVSTE 9 NT TKVSTE Sbjct: 29 NTHTKVSTE 37>XP_006721987 Length = 2849 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTLTKVSTE 9 NT TKVSTE Sbjct: 29 NTHTKVSTE 37>XP_006721986 Length = 2854 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTLTKVSTE 9 NT TKVSTE Sbjct: 16 NTHTKVSTE 24>XP_005258040 Length = 2857 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTLTKVSTE 9 NT TKVSTE Sbjct: 29 NTHTKVSTE 37>XP_006721985 Length = 2867 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 NTLTKVSTE 9 NT TKVSTE Sbjct: 29 NTHTKVSTE 37>NP_001269828 Length = 858 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NTLTKVSTE 9 NT+TKV +E Sbjct: 40 NTITKVPSE 48>NP_001093867 Length = 867 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NTLTKVSTE 9 NT+TKV +E Sbjct: 49 NTITKVPSE 57>NP_008954 Length = 1011 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NTLTKVSTE 9 NT+TKV +E Sbjct: 193 NTITKVPSE 201>NP_065880 Length = 1423 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TLTKVSTE 9 TLT VSTE Sbjct: 647 TLTSVSTE 654>NP_001129392 Length = 1165 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TLTKVSTE 9 TLT VSTE Sbjct: 647 TLTSVSTE 654>NP_001193486 Length = 1386 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TLTKVSTE 9 TLT VSTE Sbjct: 610 TLTSVSTE 617>XP_005251580 Length = 1422 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TLTKVSTE 9 TLT VSTE Sbjct: 646 TLTSVSTE 653>XP_006712269 Length = 838 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 NTLTKVSTE 9 NT+TKV +E Sbjct: 20 NTITKVPSE 28>NP_115495 Length = 6306 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TLTKVSTE 9 TLT+++TE Sbjct: 3738 TLTRITTE 3745>NP_208325 Length = 1032 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NTLTKVST 8 NTLTK+ T Sbjct: 84 NTLTKLCT 91>XP_005251374 Length = 970 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 NTLTKVST 8 NTLTK+ T Sbjct: 84 NTLTKLCT 91>NP_919269 Length = 1843 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LTKVSTE 9 LT+VSTE Sbjct: 1529 LTRVSTE 1535>XP_005264966 Length = 1843 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LTKVSTE 9 LT+VSTE Sbjct: 1529 LTRVSTE 1535>NP_077312 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TLTKVST 8 TLT+VST Sbjct: 170 TLTQVST 176>NP_078966 Length = 14507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 NTLTKVST 8 NT T VST Sbjct: 4364 NTFTDVST 4371>NP_001265561 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TLTKVST 8 TLT+VST Sbjct: 185 TLTQVST 191>NP_001265564 Length = 545 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TLTKVST 8 TLT+VST Sbjct: 211 TLTQVST 217>NP_001265562 Length = 545 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TLTKVST 8 TLT+VST Sbjct: 211 TLTQVST 217>NP_001265563 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TLTKVST 8 TLT+VST Sbjct: 185 TLTQVST 191>NP_114095 Length = 1142 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NTLTKVSTE 9 NTL +++TE Sbjct: 1094 NTLVELATE 1102>NP_057442 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TLTKVST 8 TLT+VST Sbjct: 185 TLTQVST 191>NP_077313 Length = 480 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TLTKVST 8 TLT+VST Sbjct: 170 TLTQVST 176>NP_001009959 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TLTKVSTE 9 T+TK+S E Sbjct: 38 TITKISEE 45>NP_065762 Length = 284 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TLTKVSTE 9 T+TK+S E Sbjct: 25 TITKISEE 32>NP_005844 Length = 483 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TLTKVST 8 TLT+VST Sbjct: 156 TLTQVST 162>NP_001239126 Length = 482 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TLTKVST 8 TLT+VST Sbjct: 156 TLTQVST 162>XP_005256196 Length = 529 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TLTKVST 8 TLT+VST Sbjct: 170 TLTQVST 176>XP_005256195 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TLTKVST 8 TLT+VST Sbjct: 103 TLTQVST 109>XP_005256194 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TLTKVST 8 TLT+VST Sbjct: 189 TLTQVST 195>XP_006714539 Length = 545 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TLTKVST 8 TLT+VST Sbjct: 211 TLTQVST 217>XP_006714119 Length = 1142 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 NTLTKVSTE 9 NTL +++TE Sbjct: 1094 NTLVELATE 1102>NP_001127694 Length = 471 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TLTKVST 8 TLT+VST Sbjct: 157 TLTQVST 163>NP_786924 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LTKVSTE 9 +TK+STE Sbjct: 201 VTKISTE 207>NP_001035194 Length = 4493 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 NTLTKVSTE 9 NTL STE Sbjct: 3427 NTLVTTSTE 3435>NP_150366 Length = 471 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TLTKVST 8 TLT+VST Sbjct: 157 TLTQVST 163>NP_077311 Length = 446 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TLTKVST 8 TLT+VST Sbjct: 189 TLTQVST 195Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.287 0.103 0.234 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 257,323 Number of extensions: 285 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |