Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 19 869 NP_001185763 19 869 NP_055459 19 869 NP_001002811 19 869 NP_001002812 19 869 XP_006726410 19 869 XP_006711719 19 869 XP_006711717 19 869 XP_006711716 19 869 XP_006711715 19 869 XP_006711714 19 869 XP_006711713 19 869 XP_006711712 19 869 XP_006711711 19 869 XP_006711710 19 869 XP_006711709 19 869 XP_005277503 19 869 XP_005273038 19 869 XP_006711708 19 869 XP_005277500 19 869 XP_006711707 19 869 XP_005277499 19 869 XP_006711706 19 869 XP_006711705 19 869 XP_006711164 19 869 XP_006710144 19 869 NP_647593 16 5631 NP_647594 16 5631 XP_006712490 16 5631 XP_005263702 16 5631 XP_005263701 16 5631 XP_006712488 16 5631 XP_005263700 16 5631 XP_006712487 16 5631 XP_005263699 16 5631 NP_000548 15 9605 NP_000843 15 9605 XP_005246847 15 9605 XP_006712769 15 9605 XP_006712768 15 9605 XP_006712767 15 9605 XP_006712766 15 9605 XP_005246846 15 9605 NP_005061 15 9605 NP_963868 15 9605>NP_001185761 Length = 2240 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QQAALLDLQ 9 QQ ALLDLQ Sbjct: 403 QQVALLDLQ 411>NP_001185763 Length = 2362 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QQAALLDLQ 9 QQ ALLDLQ Sbjct: 337 QQVALLDLQ 345>NP_055459 Length = 2346 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QQAALLDLQ 9 QQ ALLDLQ Sbjct: 337 QQVALLDLQ 345>NP_001002811 Length = 1132 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QQAALLDLQ 9 QQ ALLDLQ Sbjct: 500 QQVALLDLQ 508>NP_001002812 Length = 969 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QQAALLDLQ 9 QQ ALLDLQ Sbjct: 337 QQVALLDLQ 345>XP_006726410 Length = 2087 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QQAALLDLQ 9 QQ ALLDLQ Sbjct: 412 QQVALLDLQ 420>XP_006711719 Length = 2302 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QQAALLDLQ 9 QQ ALLDLQ Sbjct: 403 QQVALLDLQ 411>XP_006711717 Length = 2385 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QQAALLDLQ 9 QQ ALLDLQ Sbjct: 403 QQVALLDLQ 411>XP_006711716 Length = 2411 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QQAALLDLQ 9 QQ ALLDLQ Sbjct: 403 QQVALLDLQ 411>XP_006711715 Length = 2428 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QQAALLDLQ 9 QQ ALLDLQ Sbjct: 337 QQVALLDLQ 345>XP_006711714 Length = 2429 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QQAALLDLQ 9 QQ ALLDLQ Sbjct: 337 QQVALLDLQ 345>XP_006711713 Length = 2432 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QQAALLDLQ 9 QQ ALLDLQ Sbjct: 340 QQVALLDLQ 348>XP_006711712 Length = 2473 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QQAALLDLQ 9 QQ ALLDLQ Sbjct: 500 QQVALLDLQ 508>XP_006711711 Length = 2482 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QQAALLDLQ 9 QQ ALLDLQ Sbjct: 500 QQVALLDLQ 508>XP_006711710 Length = 2494 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QQAALLDLQ 9 QQ ALLDLQ Sbjct: 403 QQVALLDLQ 411>XP_006711709 Length = 2495 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QQAALLDLQ 9 QQ ALLDLQ Sbjct: 403 QQVALLDLQ 411>XP_005277503 Length = 2498 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QQAALLDLQ 9 QQ ALLDLQ Sbjct: 500 QQVALLDLQ 508>XP_005273038 Length = 2509 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QQAALLDLQ 9 QQ ALLDLQ Sbjct: 500 QQVALLDLQ 508>XP_006711708 Length = 2512 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QQAALLDLQ 9 QQ ALLDLQ Sbjct: 500 QQVALLDLQ 508>XP_005277500 Length = 2525 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QQAALLDLQ 9 QQ ALLDLQ Sbjct: 500 QQVALLDLQ 508>XP_006711707 Length = 2553 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QQAALLDLQ 9 QQ ALLDLQ Sbjct: 500 QQVALLDLQ 508>XP_005277499 Length = 2561 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QQAALLDLQ 9 QQ ALLDLQ Sbjct: 500 QQVALLDLQ 508>XP_006711706 Length = 2591 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QQAALLDLQ 9 QQ ALLDLQ Sbjct: 500 QQVALLDLQ 508>XP_006711705 Length = 2592 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QQAALLDLQ 9 QQ ALLDLQ Sbjct: 500 QQVALLDLQ 508>XP_006711164 Length = 2087 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QQAALLDLQ 9 QQ ALLDLQ Sbjct: 412 QQVALLDLQ 420>XP_006710144 Length = 564 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 QQAALLDLQ 9 QQ ALLDLQ Sbjct: 500 QQVALLDLQ 508>NP_647593 Length = 593 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QQAALLDL 8 +QA+LLDL Sbjct: 386 EQASLLDL 393>NP_647594 Length = 550 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QQAALLDL 8 +QA+LLDL Sbjct: 343 EQASLLDL 350>XP_006712490 Length = 538 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QQAALLDL 8 +QA+LLDL Sbjct: 331 EQASLLDL 338>XP_005263702 Length = 553 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QQAALLDL 8 +QA+LLDL Sbjct: 346 EQASLLDL 353>XP_005263701 Length = 562 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QQAALLDL 8 +QA+LLDL Sbjct: 355 EQASLLDL 362>XP_006712488 Length = 564 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QQAALLDL 8 +QA+LLDL Sbjct: 401 EQASLLDL 408>XP_005263700 Length = 577 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QQAALLDL 8 +QA+LLDL Sbjct: 370 EQASLLDL 377>XP_006712487 Length = 584 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QQAALLDL 8 +QA+LLDL Sbjct: 377 EQASLLDL 384>XP_005263699 Length = 608 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 QQAALLDL 8 +QA+LLDL Sbjct: 401 EQASLLDL 408>NP_000548 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 QQAALLDLQ 9 Q AALLD++ Sbjct: 273 QPAALLDVR 281>NP_000843 Length = 210 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 QQAALLDL 8 Q+AAL+D+ Sbjct: 85 QEAALVDM 92>XP_005246847 Length = 1034 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AALLDLQ 9 AALLDL+ Sbjct: 184 AALLDLE 190>XP_006712769 Length = 1059 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AALLDLQ 9 AALLDL+ Sbjct: 209 AALLDLE 215>XP_006712768 Length = 1150 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AALLDLQ 9 AALLDL+ Sbjct: 300 AALLDLE 306>XP_006712767 Length = 1150 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AALLDLQ 9 AALLDL+ Sbjct: 300 AALLDLE 306>XP_006712766 Length = 1179 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AALLDLQ 9 AALLDL+ Sbjct: 329 AALLDLE 335>XP_005246846 Length = 1259 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AALLDLQ 9 AALLDL+ Sbjct: 409 AALLDLE 415>NP_005061 Length = 1232 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AALLDLQ 9 AALLDL+ Sbjct: 382 AALLDLE 388>NP_963868 Length = 1259 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AALLDLQ 9 AALLDL+ Sbjct: 409 AALLDLE 415Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.128 0.306 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 382,708 Number of extensions: 536 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |