Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 390 XP_006718908 20 390 XP_005271621 20 390 XP_006718907 20 390 XP_006718906 20 390 XP_005271619 20 390 XP_005271618 20 390 NP_001017423 17 2528 NP_002851 17 2528 XP_006717996 17 2528 NP_004760 17 4312 NP_064717 17 4312 NP_064718 17 4312 NP_001268916 16 5631 NP_653170 16 5631 XP_006711092 16 5631 XP_006711091 16 5631 NP_001933 15 9605 NP_055872 15 9605 NP_036419 15 9605 NP_068761 15 9605 NP_055464 15 9605 NP_003137 15 9605 NP_951008 15 9605 XP_005259745 15 9605 XP_006719852 15 9605 XP_005266357 15 9605 XP_006719851 15 9605 XP_006719850 15 9605 XP_006719849 15 9605 XP_006719848 15 9605 XP_005266356 15 9605 XP_006719847 15 9605 XP_006719846 15 9605 XP_006719845 15 9605 XP_006719844 15 9605 XP_006719843 15 9605 XP_006719842 15 9605 XP_005274251 15 9605 XP_006713621 15 9605 XP_006713620 15 9605>NP_000042 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RRSRITKNM 9 RRSRITKN+ Sbjct: 2579 RRSRITKNV 2587>XP_006718908 Length = 1708 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RRSRITKNM 9 RRSRITKN+ Sbjct: 1231 RRSRITKNV 1239>XP_005271621 Length = 2708 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RRSRITKNM 9 RRSRITKN+ Sbjct: 2231 RRSRITKNV 2239>XP_006718907 Length = 3050 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RRSRITKNM 9 RRSRITKN+ Sbjct: 2573 RRSRITKNV 2581>XP_006718906 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RRSRITKNM 9 RRSRITKN+ Sbjct: 2579 RRSRITKNV 2587>XP_005271619 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RRSRITKNM 9 RRSRITKN+ Sbjct: 2579 RRSRITKNV 2587>XP_005271618 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RRSRITKNM 9 RRSRITKN+ Sbjct: 2579 RRSRITKNV 2587>NP_001017423 Length = 793 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RRSRITKNM 9 RR+RI KN+ Sbjct: 454 RRTRIAKNL 462>NP_002851 Length = 795 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RRSRITKNM 9 RR+RI KN+ Sbjct: 456 RRTRIAKNL 464>XP_006717996 Length = 795 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RRSRITKNM 9 RR+RI KN+ Sbjct: 456 RRTRIAKNL 464>NP_004760 Length = 531 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RRSRITKN 8 RRSR+T N Sbjct: 98 RRSRLTPN 105>NP_064717 Length = 549 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RRSRITKN 8 RRSR+T N Sbjct: 98 RRSRLTPN 105>NP_064718 Length = 543 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RRSRITKN 8 RRSR+T N Sbjct: 98 RRSRLTPN 105>NP_001268916 Length = 1203 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RRSRITKNM 9 RRS+ TKN+ Sbjct: 417 RRSKGTKNL 425>NP_653170 Length = 1216 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RRSRITKNM 9 RRS+ TKN+ Sbjct: 417 RRSKGTKNL 425>XP_006711092 Length = 1161 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RRSRITKNM 9 RRS+ TKN+ Sbjct: 417 RRSKGTKNL 425>XP_006711091 Length = 1161 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RRSRITKNM 9 RRS+ TKN+ Sbjct: 417 RRSKGTKNL 425>NP_001933 Length = 1049 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RSRITK 7 RSRITK Sbjct: 1036 RSRITK 1041>NP_055872 Length = 4678 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SRITKN 8 SR+TKN Sbjct: 4192 SRVTKN 4197>NP_036419 Length = 778 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRSRITKNM 9 RRS I K+M Sbjct: 184 RRSEILKSM 192>NP_068761 Length = 1133 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRSRITKNM 9 ++SRI KN+ Sbjct: 530 QKSRIEKNL 538>NP_055464 Length = 953 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RSRITKN 8 RSR+TK+ Sbjct: 557 RSRVTKS 563>NP_003137 Length = 709 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RITKNM 9 R+TKNM Sbjct: 301 RLTKNM 306>NP_951008 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RRSRITKNM 9 ++SRI KN+ Sbjct: 530 QKSRIEKNL 538>XP_005259745 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RSRITKN 8 RSR+TK+ Sbjct: 103 RSRVTKS 109>XP_006719852 Length = 4752 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SRITKN 8 SR+TKN Sbjct: 4266 SRVTKN 4271>XP_005266357 Length = 4600 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SRITKN 8 SR+TKN Sbjct: 4114 SRVTKN 4119>XP_006719851 Length = 4689 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SRITKN 8 SR+TKN Sbjct: 4203 SRVTKN 4208>XP_006719850 Length = 4697 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SRITKN 8 SR+TKN Sbjct: 4211 SRVTKN 4216>XP_006719849 Length = 4703 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SRITKN 8 SR+TKN Sbjct: 4217 SRVTKN 4222>XP_006719848 Length = 4737 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SRITKN 8 SR+TKN Sbjct: 4251 SRVTKN 4256>XP_005266356 Length = 4755 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SRITKN 8 SR+TKN Sbjct: 4269 SRVTKN 4274>XP_006719847 Length = 4761 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SRITKN 8 SR+TKN Sbjct: 4275 SRVTKN 4280>XP_006719846 Length = 4763 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SRITKN 8 SR+TKN Sbjct: 4277 SRVTKN 4282>XP_006719845 Length = 4772 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SRITKN 8 SR+TKN Sbjct: 4286 SRVTKN 4291>XP_006719844 Length = 4789 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SRITKN 8 SR+TKN Sbjct: 4303 SRVTKN 4308>XP_006719843 Length = 4794 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SRITKN 8 SR+TKN Sbjct: 4308 SRVTKN 4313>XP_006719842 Length = 4797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SRITKN 8 SR+TKN Sbjct: 4311 SRVTKN 4316>XP_005274251 Length = 712 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RITKNM 9 R+TKNM Sbjct: 301 RLTKNM 306>XP_006713621 Length = 622 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRSRITKNM 9 RRS I K+M Sbjct: 184 RRSEILKSM 192>XP_006713620 Length = 785 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RRSRITKNM 9 RRS I K+M Sbjct: 184 RRSEILKSM 192Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.127 0.326 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 375,302 Number of extensions: 622 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |