Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 17 2528 XP_006716142 17 2528 XP_005250088 17 2528 XP_006716141 17 2528 XP_005250085 17 2528 XP_006716140 17 2528 XP_005250084 17 2528 XP_005250083 17 2528 XP_005250082 17 2528 NP_055335 17 4312 NP_001099008 17 4312 XP_006721482 17 4312 XP_005256470 17 4312 NP_055244 16 5631 XP_005247419 16 5631 NP_004594 16 7355 NP_001258857 16 7355 NP_001258856 16 7355 NP_001159375 16 7355 NP_060046 16 7355 XP_005252149 16 7355 XP_005252148 16 7355 XP_005252147 16 7355 XP_005252146 16 7355 XP_006717239 16 7355 XP_005250609 16 7355 NP_001153844 15 9605 NP_113654 15 9605 NP_066000 15 9605 NP_892006 15 9605 NP_149062 15 9605 NP_006763 15 9605 NP_004223 15 9605 XP_006722640 15 9605 XP_005266840 15 9605 XP_006716727 15 9605 XP_005251134 15 9605 XP_006715488 15 9605 XP_006715487 15 9605 XP_006715486 15 9605 XP_006715485 15 9605 XP_006715484 15 9605 XP_006715483 15 9605 XP_006715482 15 9605 XP_006715481 15 9605 XP_006715480 15 9605 XP_006715479 15 9605 XP_006715478 15 9605 XP_006715477 15 9605 XP_006715476 15 9605 XP_006715475 15 9605 XP_006715474 15 9605 XP_006715473 15 9605 XP_006715472 15 9605 XP_006715471 15 9605 XP_006715470 15 9605 XP_006713781 15 9605 NP_000979 15 9605 NP_116193 15 9605>NP_733751 Length = 4911 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RSKLKSLIG 9 RSKLKS IG Sbjct: 909 RSKLKSGIG 917>XP_006716142 Length = 4927 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RSKLKSLIG 9 RSKLKS IG Sbjct: 910 RSKLKSGIG 918>XP_005250088 Length = 4928 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RSKLKSLIG 9 RSKLKS IG Sbjct: 910 RSKLKSGIG 918>XP_006716141 Length = 4959 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RSKLKSLIG 9 RSKLKS IG Sbjct: 910 RSKLKSGIG 918>XP_005250085 Length = 4979 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RSKLKSLIG 9 RSKLKS IG Sbjct: 910 RSKLKSGIG 918>XP_006716140 Length = 4982 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RSKLKSLIG 9 RSKLKS IG Sbjct: 910 RSKLKSGIG 918>XP_005250084 Length = 4982 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RSKLKSLIG 9 RSKLKS IG Sbjct: 910 RSKLKSGIG 918>XP_005250083 Length = 4982 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RSKLKSLIG 9 RSKLKS IG Sbjct: 909 RSKLKSGIG 917>XP_005250082 Length = 4983 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RSKLKSLIG 9 RSKLKS IG Sbjct: 910 RSKLKSGIG 918>NP_055335 Length = 1328 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKLKSLIG 9 SKLK L+G Sbjct: 227 SKLKKLVG 234>NP_001099008 Length = 1332 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKLKSLIG 9 SKLK L+G Sbjct: 227 SKLKKLVG 234>XP_006721482 Length = 723 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKLKSLIG 9 SKLK L+G Sbjct: 227 SKLKKLVG 234>XP_005256470 Length = 1120 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SKLKSLIG 9 SKLK L+G Sbjct: 227 SKLKKLVG 234>NP_055244 Length = 984 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KLKSLIG 9 KLKSL+G Sbjct: 388 KLKSLLG 394>XP_005247419 Length = 1014 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KLKSLIG 9 KLKSL+G Sbjct: 388 KLKSLLG 394>NP_004594 Length = 288 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RSKLKSL 7 RSKLKS+ Sbjct: 90 RSKLKSI 96>NP_001258857 Length = 1304 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RSKLKSLIG 9 + KLK L+G Sbjct: 1124 KKKLKELVG 1132>NP_001258856 Length = 1335 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RSKLKSLIG 9 + KLK L+G Sbjct: 1155 KKKLKELVG 1163>NP_001159375 Length = 251 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RSKLKSL 7 RSKLKS+ Sbjct: 90 RSKLKSI 96>NP_060046 Length = 1401 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RSKLKSLIG 9 + KLK L+G Sbjct: 1221 KKKLKELVG 1229>XP_005252149 Length = 921 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RSKLKSLIG 9 + KLK L+G Sbjct: 741 KKKLKELVG 749>XP_005252148 Length = 1043 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RSKLKSLIG 9 + KLK L+G Sbjct: 863 KKKLKELVG 871>XP_005252147 Length = 1329 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RSKLKSLIG 9 + KLK L+G Sbjct: 1149 KKKLKELVG 1157>XP_005252146 Length = 1342 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RSKLKSLIG 9 + KLK L+G Sbjct: 1162 KKKLKELVG 1170>XP_006717239 Length = 1401 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RSKLKSLIG 9 + KLK L+G Sbjct: 1221 KKKLKELVG 1229>XP_005250609 Length = 280 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RSKLKSL 7 RSKLKS+ Sbjct: 90 RSKLKSI 96>NP_001153844 Length = 1148 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KLKSLIG 9 K+KSL+G Sbjct: 556 KMKSLLG 562>NP_113654 Length = 1246 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KLKSLIG 9 K+KSL+G Sbjct: 654 KMKSLLG 660>NP_066000 Length = 771 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KLKSLIG 9 KLK LIG Sbjct: 532 KLKKLIG 538>NP_892006 Length = 8797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKLKSLIG 9 SKL S++G Sbjct: 1495 SKLSSIVG 1502>NP_149062 Length = 8749 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKLKSLIG 9 SKL S++G Sbjct: 1502 SKLSSIVG 1509>NP_006763 Length = 1343 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SKLKSLIG 9 S++KS+IG Sbjct: 1257 SQIKSIIG 1264>NP_004223 Length = 535 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSKLKSLIG 9 RSK +SL+G Sbjct: 67 RSKSESLMG 75>XP_006722640 Length = 535 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSKLKSLIG 9 RSK +SL+G Sbjct: 67 RSKSESLMG 75>XP_005266840 Length = 535 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RSKLKSLIG 9 RSK +SL+G Sbjct: 67 RSKSESLMG 75>XP_006716727 Length = 1139 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KLKSLIG 9 K+KSL+G Sbjct: 547 KMKSLLG 553>XP_005251134 Length = 1148 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KLKSLIG 9 K+KSL+G Sbjct: 556 KMKSLLG 562>XP_006715488 Length = 8721 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKLKSLIG 9 SKL S++G Sbjct: 1502 SKLSSIVG 1509>XP_006715487 Length = 8744 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKLKSLIG 9 SKL S++G Sbjct: 1502 SKLSSIVG 1509>XP_006715486 Length = 8758 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKLKSLIG 9 SKL S++G Sbjct: 1502 SKLSSIVG 1509>XP_006715485 Length = 8793 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKLKSLIG 9 SKL S++G Sbjct: 1449 SKLSSIVG 1456>XP_006715484 Length = 8794 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKLKSLIG 9 SKL S++G Sbjct: 1502 SKLSSIVG 1509>XP_006715483 Length = 8795 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKLKSLIG 9 SKL S++G Sbjct: 1502 SKLSSIVG 1509>XP_006715482 Length = 8797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKLKSLIG 9 SKL S++G Sbjct: 1495 SKLSSIVG 1502>XP_006715481 Length = 8799 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKLKSLIG 9 SKL S++G Sbjct: 1455 SKLSSIVG 1462>XP_006715480 Length = 8799 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKLKSLIG 9 SKL S++G Sbjct: 1502 SKLSSIVG 1509>XP_006715479 Length = 8804 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKLKSLIG 9 SKL S++G Sbjct: 1502 SKLSSIVG 1509>XP_006715478 Length = 8809 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKLKSLIG 9 SKL S++G Sbjct: 1502 SKLSSIVG 1509>XP_006715477 Length = 8822 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKLKSLIG 9 SKL S++G Sbjct: 1478 SKLSSIVG 1485>XP_006715476 Length = 8823 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKLKSLIG 9 SKL S++G Sbjct: 1502 SKLSSIVG 1509>XP_006715475 Length = 8827 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKLKSLIG 9 SKL S++G Sbjct: 1502 SKLSSIVG 1509>XP_006715474 Length = 8829 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKLKSLIG 9 SKL S++G Sbjct: 1485 SKLSSIVG 1492>XP_006715473 Length = 8832 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKLKSLIG 9 SKL S++G Sbjct: 1502 SKLSSIVG 1509>XP_006715472 Length = 8839 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKLKSLIG 9 SKL S++G Sbjct: 1495 SKLSSIVG 1502>XP_006715471 Length = 8842 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKLKSLIG 9 SKL S++G Sbjct: 1502 SKLSSIVG 1509>XP_006715470 Length = 8846 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SKLKSLIG 9 SKL S++G Sbjct: 1502 SKLSSIVG 1509>XP_006713781 Length = 771 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KLKSLIG 9 KLK LIG Sbjct: 532 KLKKLIG 538>NP_000979 Length = 136 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RSKLKSLI 8 RSK+KS + Sbjct: 65 RSKIKSFV 72>NP_116193 Length = 270 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SKLKSLI 8 SKLKSL+ Sbjct: 52 SKLKSLL 58Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.135 0.329 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 348,180 Number of extensions: 613 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |