Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001156685 18 1135 NP_000133 18 1135 NP_075254 18 1135 XP_006713936 18 1135 XP_006713935 18 1135 XP_006713934 18 1135 XP_006713933 18 1135 XP_006713932 18 1135 XP_006713931 18 1135 NP_001139145 17 4312 NP_005286 17 4312 XP_006714452 17 4312 XP_005263364 17 4312 XP_005263363 17 4312 XP_005263362 17 4312 XP_006714426 17 4312 XP_006714423 17 4312 XP_006714422 17 4312 XP_006714421 17 4312 XP_006714420 17 4312 XP_006714419 17 4312 XP_006714418 17 4312 XP_006714417 17 4312 XP_005263359 17 4312 XP_006714416 17 4312 XP_006714415 17 4312 XP_006714414 17 4312 XP_006714413 17 4312 XP_006714412 17 4312 XP_006714411 17 4312 XP_006714410 17 4312 XP_006714409 17 4312 XP_006714408 17 4312 NP_814444 16 7355 NP_004596 16 7355 NP_001230328 16 7355 NP_932066 16 7355 NP_057150 16 7355 XP_005259239 16 7355 XP_006716001 16 7355 XP_005245288 16 7355 NP_000836 16 7355 NP_060250 15 9605 XP_006716523 15 9605 XP_006716522 15 9605 XP_005251324 15 9605 XP_005251323 15 9605>NP_001156685 Length = 808 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 SLESN SMS Sbjct: 426 SLESNASMS 434>NP_000133 Length = 806 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 SLESN SMS Sbjct: 424 SLESNASMS 432>NP_075254 Length = 694 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 SLESN SMS Sbjct: 312 SLESNASMS 320>XP_006713936 Length = 807 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 SLESN SMS Sbjct: 424 SLESNASMS 432>XP_006713935 Length = 807 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 SLESN SMS Sbjct: 425 SLESNASMS 433>XP_006713934 Length = 809 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 SLESN SMS Sbjct: 426 SLESNASMS 434>XP_006713933 Length = 810 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 SLESN SMS Sbjct: 427 SLESNASMS 435>XP_006713932 Length = 810 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 SLESN SMS Sbjct: 428 SLESNASMS 436>XP_006713931 Length = 811 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 SLESN SMS Sbjct: 428 SLESNASMS 436>NP_001139145 Length = 824 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 S ESNT+MS Sbjct: 14 SEESNTTMS 22>NP_005286 Length = 433 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SLESNTSM 8 SLESNT++ Sbjct: 106 SLESNTAL 113>XP_006714452 Length = 707 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 S ESNT+MS Sbjct: 149 SEESNTTMS 157>XP_005263364 Length = 959 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 S ESNT+MS Sbjct: 149 SEESNTTMS 157>XP_005263363 Length = 1092 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 S ESNT+MS Sbjct: 149 SEESNTTMS 157>XP_005263362 Length = 1117 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 S ESNT+MS Sbjct: 149 SEESNTTMS 157>XP_006714426 Length = 1145 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 S ESNT+MS Sbjct: 149 SEESNTTMS 157>XP_006714423 Length = 1265 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 S ESNT+MS Sbjct: 14 SEESNTTMS 22>XP_006714422 Length = 1242 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 S ESNT+MS Sbjct: 149 SEESNTTMS 157>XP_006714421 Length = 1254 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 S ESNT+MS Sbjct: 149 SEESNTTMS 157>XP_006714420 Length = 1265 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 S ESNT+MS Sbjct: 14 SEESNTTMS 22>XP_006714419 Length = 1265 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 S ESNT+MS Sbjct: 14 SEESNTTMS 22>XP_006714418 Length = 1300 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 S ESNT+MS Sbjct: 149 SEESNTTMS 157>XP_006714417 Length = 1319 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 S ESNT+MS Sbjct: 149 SEESNTTMS 157>XP_005263359 Length = 1340 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 S ESNT+MS Sbjct: 149 SEESNTTMS 157>XP_006714416 Length = 1346 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 S ESNT+MS Sbjct: 95 SEESNTTMS 103>XP_006714415 Length = 1347 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 S ESNT+MS Sbjct: 149 SEESNTTMS 157>XP_006714414 Length = 1369 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 S ESNT+MS Sbjct: 118 SEESNTTMS 126>XP_006714413 Length = 1369 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 S ESNT+MS Sbjct: 118 SEESNTTMS 126>XP_006714412 Length = 1372 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 S ESNT+MS Sbjct: 149 SEESNTTMS 157>XP_006714411 Length = 1377 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 S ESNT+MS Sbjct: 126 SEESNTTMS 134>XP_006714410 Length = 1385 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 S ESNT+MS Sbjct: 149 SEESNTTMS 157>XP_006714409 Length = 1400 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 S ESNT+MS Sbjct: 149 SEESNTTMS 157>XP_006714408 Length = 1400 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SLESNTSMS 9 S ESNT+MS Sbjct: 149 SEESNTTMS 157>NP_814444 Length = 365 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SLESNTSM 8 SLE NTS+ Sbjct: 332 SLEPNTSL 339>NP_004596 Length = 350 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SLESNTSM 8 SLE NTS+ Sbjct: 317 SLEPNTSL 324>NP_001230328 Length = 124 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LESNTSMS 9 +ESNTS S Sbjct: 1 MESNTSSS 8>NP_932066 Length = 164 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LESNTSMS 9 +ESNTS S Sbjct: 41 MESNTSSS 48>NP_057150 Length = 165 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LESNTSMS 9 +ESNTS S Sbjct: 42 MESNTSSS 49>XP_005259239 Length = 221 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SLESNTSM 8 SLE NTS+ Sbjct: 188 SLEPNTSL 195>XP_006716001 Length = 908 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SLESNTS 7 SLE+NTS Sbjct: 888 SLETNTS 894>XP_005245288 Length = 124 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LESNTSMS 9 +ESNTS S Sbjct: 1 MESNTSSS 8>NP_000836 Length = 908 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SLESNTS 7 SLE+NTS Sbjct: 888 SLETNTS 894>NP_060250 Length = 2997 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ESNTSMS 9 ESN SMS Sbjct: 2271 ESNASMS 2277>XP_006716523 Length = 1912 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ESNTSMS 9 ESN SMS Sbjct: 1186 ESNASMS 1192>XP_006716522 Length = 2192 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ESNTSMS 9 ESN SMS Sbjct: 1466 ESNASMS 1472>XP_005251324 Length = 2996 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ESNTSMS 9 ESN SMS Sbjct: 2270 ESNASMS 2276>XP_005251323 Length = 2997 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ESNTSMS 9 ESN SMS Sbjct: 2271 ESNASMS 2277Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.272 0.0864 0.178 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 322,218 Number of extensions: 222 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |