Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 509 XP_005262424 20 509 NP_878908 17 4312 XP_006726924 17 4312 XP_005258838 17 4312 NP_775904 17 4312 NP_055994 16 5631 NP_001138586 16 5631 NP_001271266 16 5631 NP_002227 16 7355 NP_640334 15 9605 NP_006454 15 9605 NP_998787 15 9605 NP_964010 15 9605 NP_001259017 15 9605 NP_001259016 15 9605 NP_001271160 15 9605 NP_001271161 15 9605 NP_775829 15 9605 NP_001271159 15 9605 NP_149132 15 9605 NP_005062 15 9605 XP_006722907 15 9605 XP_006722906 15 9605 XP_006722905 15 9605 XP_006720213 15 9605 XP_006720212 15 9605 XP_005267740 15 9605 XP_006719093 15 9605 XP_005253367 15 9605 XP_005253366 15 9605 XP_005253365 15 9605 XP_005253364 15 9605 XP_005253363 15 9605 XP_005253362 15 9605 XP_005253361 15 9605 XP_005248970 15 9605 XP_005248969 15 9605 XP_006715079 15 9605 XP_005248968 15 9605 XP_005264148 15 9605 XP_005264145 15 9605 XP_006711984 15 9605 XP_006711983 15 9605>NP_722576 Length = 3080 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SMTLTHVML 9 SM LTHVML Sbjct: 2507 SMNLTHVML 2515>XP_005262424 Length = 2875 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SMTLTHVML 9 SM LTHVML Sbjct: 2302 SMNLTHVML 2310>NP_878908 Length = 465 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SMTLTHVML 9 ++T THVML Sbjct: 195 AVTKTHVML 203>XP_006726924 Length = 451 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SMTLTHVML 9 ++T THVML Sbjct: 181 AVTKTHVML 189>XP_005258838 Length = 563 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TLTHVML 9 TLTHV+L Sbjct: 302 TLTHVVL 308>NP_775904 Length = 493 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TLTHVML 9 TLTHV+L Sbjct: 288 TLTHVVL 294>NP_055994 Length = 1297 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MTLTHVML 9 MTL+HV++ Sbjct: 334 MTLSHVLV 341>NP_001138586 Length = 1236 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MTLTHVML 9 MTL+HV++ Sbjct: 273 MTLSHVLV 280>NP_001271266 Length = 1197 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MTLTHVML 9 MTL+HV++ Sbjct: 234 MTLSHVLV 241>NP_002227 Length = 494 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SMTLTHV 7 S+TLTH+ Sbjct: 269 SLTLTHL 275>NP_640334 Length = 766 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SMTLTHVML 9 S+TL H ML Sbjct: 338 SLTLQHHML 346>NP_006454 Length = 424 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TLTHVML 9 T+THV++ Sbjct: 295 TITHVLI 301>NP_998787 Length = 424 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TLTHVML 9 T+THV++ Sbjct: 295 TITHVLI 301>NP_964010 Length = 424 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TLTHVML 9 T+THV++ Sbjct: 295 TITHVLI 301>NP_001259017 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SMTLTHVM 8 +MTL HV+ Sbjct: 43 TMTLEHVL 50>NP_001259016 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SMTLTHVM 8 +MTL HV+ Sbjct: 43 TMTLEHVL 50>NP_001271160 Length = 880 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SMTLTHVML 9 S+T THV L Sbjct: 671 SLTPTHVTL 679>NP_001271161 Length = 837 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SMTLTHVML 9 S+T THV L Sbjct: 628 SLTPTHVTL 636>NP_775829 Length = 655 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SMTLTHVML 9 S+TL H ML Sbjct: 235 SLTLQHHML 243>NP_001271159 Length = 1104 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SMTLTHVML 9 S+T THV L Sbjct: 895 SLTPTHVTL 903>NP_149132 Length = 1118 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SMTLTHVML 9 S+T THV L Sbjct: 909 SLTPTHVTL 917>NP_005062 Length = 564 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SMTLTHVM 8 +MTL HV+ Sbjct: 43 TMTLEHVL 50>XP_006722907 Length = 564 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SMTLTHVM 8 +MTL HV+ Sbjct: 43 TMTLEHVL 50>XP_006722906 Length = 564 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SMTLTHVM 8 +MTL HV+ Sbjct: 43 TMTLEHVL 50>XP_006722905 Length = 564 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SMTLTHVM 8 +MTL HV+ Sbjct: 43 TMTLEHVL 50>XP_006720213 Length = 933 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SMTLTHVML 9 S+T THV L Sbjct: 724 SLTPTHVTL 732>XP_006720212 Length = 956 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SMTLTHVML 9 S+T THV L Sbjct: 747 SLTPTHVTL 755>XP_005267740 Length = 1081 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SMTLTHVML 9 S+T THV L Sbjct: 872 SLTPTHVTL 880>XP_006719093 Length = 471 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SMTLTHVML 9 S+TL H ML Sbjct: 90 SLTLQHHML 98>XP_005253367 Length = 518 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SMTLTHVML 9 S+TL H ML Sbjct: 90 SLTLQHHML 98>XP_005253366 Length = 673 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SMTLTHVML 9 S+TL H ML Sbjct: 245 SLTLQHHML 253>XP_005253365 Length = 673 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SMTLTHVML 9 S+TL H ML Sbjct: 245 SLTLQHHML 253>XP_005253364 Length = 673 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SMTLTHVML 9 S+TL H ML Sbjct: 245 SLTLQHHML 253>XP_005253363 Length = 851 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SMTLTHVML 9 S+TL H ML Sbjct: 423 SLTLQHHML 431>XP_005253362 Length = 878 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SMTLTHVML 9 S+TL H ML Sbjct: 450 SLTLQHHML 458>XP_005253361 Length = 930 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SMTLTHVML 9 S+TL H ML Sbjct: 502 SLTLQHHML 510>XP_005248970 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SMTLTHVML 9 S+TL H ML Sbjct: 35 SLTLQHHML 43>XP_005248969 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SMTLTHVML 9 S+TL H ML Sbjct: 35 SLTLQHHML 43>XP_006715079 Length = 488 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SMTLTHVML 9 S+TL H ML Sbjct: 68 SLTLQHHML 76>XP_005248968 Length = 620 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SMTLTHVML 9 S+TL H ML Sbjct: 235 SLTLQHHML 243>XP_005264148 Length = 289 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TLTHVML 9 T+THV++ Sbjct: 160 TITHVLI 166>XP_005264145 Length = 424 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TLTHVML 9 T+THV++ Sbjct: 295 TITHVLI 301>XP_006711984 Length = 457 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TLTHVML 9 T+THV++ Sbjct: 342 TITHVLI 348>XP_006711983 Length = 471 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TLTHVML 9 T+THV++ Sbjct: 342 TITHVLI 348Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.334 0.126 0.339 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 490,178 Number of extensions: 475 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |