Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005912 20 390 XP_005248577 20 390 XP_005248576 20 390 NP_940847 17 4312 NP_001182762 17 4312 XP_006723079 17 4312 XP_006723078 17 4312 NP_689607 16 5631 XP_005247177 16 5631 XP_005247176 16 5631 XP_006713561 16 5631 NP_803875 16 5631 NP_055474 16 7355 NP_001124331 16 7355 NP_001124330 16 7355 NP_001177143 16 7355 NP_001138328 16 7355 NP_001138329 16 7355 NP_060643 16 7355 XP_006720850 16 7355 XP_006720849 16 7355 XP_005254861 16 7355 XP_006720848 16 7355 XP_005254860 16 7355 XP_006720847 16 7355 XP_006720846 16 7355 XP_005254859 16 7355 XP_006720845 16 7355 XP_005254858 16 7355 XP_006719048 16 7355 XP_005253761 16 7355 XP_006710293 16 7355 NP_056224 15 9605 NP_001229761 15 9605 NP_115765 15 9605 NP_071353 15 9605 XP_006726449 15 9605 XP_005257627 15 9605 XP_005253225 15 9605 XP_006718409 15 9605 XP_005253224 15 9605 XP_005253223 15 9605 XP_006712222 15 9605>NP_005912 Length = 1512 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 IIIQQDTP 9 IIIQQDTP Sbjct: 1217 IIIQQDTP 1224>XP_005248577 Length = 1349 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 IIIQQDTP 9 IIIQQDTP Sbjct: 1054 IIIQQDTP 1061>XP_005248576 Length = 1375 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 IIIQQDTP 9 IIIQQDTP Sbjct: 1080 IIIQQDTP 1087>NP_940847 Length = 452 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IQQDTP 9 +QQDTP Sbjct: 44 VQQDTP 49>NP_001182762 Length = 566 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IQQDTP 9 +QQDTP Sbjct: 158 VQQDTP 163>XP_006723079 Length = 472 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IQQDTP 9 +QQDTP Sbjct: 44 VQQDTP 49>XP_006723078 Length = 586 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IQQDTP 9 +QQDTP Sbjct: 158 VQQDTP 163>NP_689607 Length = 663 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TIIIQQDTP 9 T I+Q+D P Sbjct: 467 TCIVQEDMP 475>XP_005247177 Length = 512 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TIIIQQDTP 9 T I+Q+D P Sbjct: 467 TCIVQEDMP 475>XP_005247176 Length = 517 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TIIIQQDTP 9 T I+Q+D P Sbjct: 321 TCIVQEDMP 329>XP_006713561 Length = 616 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TIIIQQDTP 9 T I+Q+D P Sbjct: 420 TCIVQEDMP 428>NP_803875 Length = 4243 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TIIIQQDTP 9 TI++ Q TP Sbjct: 2205 TILLDQSTP 2213>NP_055474 Length = 1408 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IIQQDTP 9 I+QQD P Sbjct: 638 ILQQDAP 644>NP_001124331 Length = 1408 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IIQQDTP 9 I+QQD P Sbjct: 638 ILQQDAP 644>NP_001124330 Length = 1433 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IIQQDTP 9 I+QQD P Sbjct: 638 ILQQDAP 644>NP_001177143 Length = 1406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IIQQDTP 9 I+QQD P Sbjct: 638 ILQQDAP 644>NP_001138328 Length = 790 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 IIQQDTP 9 IIQ DTP Sbjct: 778 IIQLDTP 784>NP_001138329 Length = 758 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 IIQQDTP 9 IIQ DTP Sbjct: 746 IIQLDTP 752>NP_060643 Length = 790 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 IIQQDTP 9 IIQ DTP Sbjct: 778 IIQLDTP 784>XP_006720850 Length = 1421 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IIQQDTP 9 I+QQD P Sbjct: 638 ILQQDAP 644>XP_006720849 Length = 1366 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IIQQDTP 9 I+QQD P Sbjct: 638 ILQQDAP 644>XP_005254861 Length = 1408 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IIQQDTP 9 I+QQD P Sbjct: 638 ILQQDAP 644>XP_006720848 Length = 1427 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IIQQDTP 9 I+QQD P Sbjct: 638 ILQQDAP 644>XP_005254860 Length = 1429 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IIQQDTP 9 I+QQD P Sbjct: 638 ILQQDAP 644>XP_006720847 Length = 1461 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IIQQDTP 9 I+QQD P Sbjct: 638 ILQQDAP 644>XP_006720846 Length = 1469 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IIQQDTP 9 I+QQD P Sbjct: 638 ILQQDAP 644>XP_005254859 Length = 1469 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IIQQDTP 9 I+QQD P Sbjct: 638 ILQQDAP 644>XP_006720845 Length = 1469 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IIQQDTP 9 I+QQD P Sbjct: 638 ILQQDAP 644>XP_005254858 Length = 1469 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IIQQDTP 9 I+QQD P Sbjct: 638 ILQQDAP 644>XP_006719048 Length = 776 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 IIQQDTP 9 IIQ DTP Sbjct: 764 IIQLDTP 770>XP_005253761 Length = 790 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 IIQQDTP 9 IIQ DTP Sbjct: 778 IIQLDTP 784>XP_006710293 Length = 807 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IIQQDTP 9 I+QQD P Sbjct: 296 ILQQDAP 302>NP_056224 Length = 3123 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 IIQQDTP 9 ++QQ TP Sbjct: 3014 VVQQQTP 3020>NP_001229761 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IIQQDTP 9 +I+Q+TP Sbjct: 298 VIEQETP 304>NP_115765 Length = 521 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IIQQDTP 9 +I+Q+TP Sbjct: 326 VIEQETP 332>NP_071353 Length = 1181 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 TIIIQQDTP 9 T+I+ +TP Sbjct: 886 TLIVNMETP 894>XP_006726449 Length = 799 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IIQQDTP 9 +IQ++TP Sbjct: 423 VIQEETP 429>XP_005257627 Length = 1013 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 TIIIQQDTP 9 T+I+ +TP Sbjct: 718 TLIVNMETP 726>XP_005253225 Length = 535 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IIQQDTP 9 +I+Q+TP Sbjct: 340 VIEQETP 346>XP_006718409 Length = 546 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IIQQDTP 9 +I+Q+TP Sbjct: 351 VIEQETP 357>XP_005253224 Length = 549 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IIQQDTP 9 +I+Q+TP Sbjct: 354 VIEQETP 360>XP_005253223 Length = 560 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IIQQDTP 9 +I+Q+TP Sbjct: 365 VIEQETP 371>XP_006712222 Length = 799 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IIQQDTP 9 +IQ++TP Sbjct: 423 VIQEETP 429Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.137 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 583,580 Number of extensions: 940 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |