Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_056163                                                              17    3301
NP_001265238                                                           17    3301
NP_006413                                                              17    3301
NP_061891                                                              17    3301
XP_005253722                                                           17    3301
XP_005253721                                                           17    3301
XP_006719014                                                           17    3301
XP_005274112                                                           17    3301
XP_006717990                                                           17    3301
XP_005263969                                                           17    3301
XP_005263968                                                           17    3301
XP_005263967                                                           17    3301
XP_005263966                                                           17    3301
NP_060563                                                              17    3301
NP_612357                                                              17    4312
NP_076915                                                              16    5631
NP_002445                                                              16    5631
NP_003939                                                              16    5631
XP_005255923                                                           16    5631
XP_006714537                                                           16    5631
XP_006714470                                                           16    5631
XP_006714469                                                           16    5631
XP_005263392                                                           16    5631
NP_056066                                                              16    5631
NP_003115                                                              16    7355
NP_005532                                                              16    7355
NP_001017915                                                           16    7355
NP_005091                                                              16    7355
NP_001078896                                                           16    7355
NP_001078894                                                           16    7355
NP_001078897                                                           16    7355
NP_000478                                                              16    7355
NP_001078895                                                           16    7355
XP_006724477                                                           16    7355
XP_005267290                                                           16    7355
XP_006712626                                                           16    7355
XP_006712625                                                           16    7355
XP_006712624                                                           16    7355
XP_006712623                                                           16    7355
XP_005263949                                                           16    7355
XP_006710309                                                           16    7355
NP_057128                                                              16    7355
NP_955368                                                              16    7355
NP_443157                                                              15    9605
NP_004022                                                              15    9605
NP_004020                                                              15    9605
NP_001563                                                              15    9605
NP_005493                                                              15    9605
NP_071394                                                              15    9605
NP_001177410                                                           15    9605
NP_001186728                                                           15    9605
NP_689592                                                              15    9605
NP_787120                                                              15    9605
XP_005258543                                                           15    9605
XP_006726249                                                           15    9605
XP_005258542                                                           15    9605
XP_005258541                                                           15    9605
XP_005258540                                                           15    9605
XP_006726248                                                           15    9605
XP_005258539                                                           15    9605
XP_005258538                                                           15    9605
XP_005276288                                                           15    9605
XP_005277301                                                           15    9605
XP_006726369                                                           15    9605
XP_005277300                                                           15    9605
XP_005277299                                                           15    9605
XP_005277298                                                           15    9605
XP_006726368                                                           15    9605
XP_005277297                                                           15    9605
XP_005277296                                                           15    9605
XP_006726331                                                           15    9605
XP_005277122                                                           15    9605
XP_005277120                                                           15    9605
XP_006726330                                                           15    9605
XP_005277119                                                           15    9605
XP_005277118                                                           15    9605
XP_006725202                                                           15    9605
XP_005252965                                                           15    9605
XP_006725201                                                           15    9605
XP_006725200                                                           15    9605
XP_006723060                                                           15    9605
XP_005278309                                                           15    9605
XP_005278307                                                           15    9605
XP_006723059                                                           15    9605
XP_005278306                                                           15    9605
XP_005278305                                                           15    9605
XP_005252966                                                           15    9605
XP_005252964                                                           15    9605
XP_005252963                                                           15    9605
XP_005251837                                                           15    9605
XP_005251835                                                           15    9605
XP_006717058                                                           15    9605
XP_005251833                                                           15    9605
XP_005251831                                                           15    9605
XP_005251830                                                           15    9605
XP_006714228                                                           15    9605
XP_006714227                                                           15    9605
XP_006714226                                                           15    9605
XP_006714225                                                           15    9605
XP_006714224                                                           15    9605
XP_006714223                                                           15    9605
XP_006714222                                                           15    9605
XP_006714221                                                           15    9605
XP_006714220                                                           15    9605
XP_006713670                                                           15    9605
XP_005247446                                                           15    9605
XP_006713669                                                           15    9605
XP_005265700                                                           15    9605
XP_005273108                                                           15    9605
XP_005276003                                                           15    9605
NP_001123539                                                           15    9605
NP_612442                                                              15    9605
NP_056086                                                              15    9605
>NP_056163
          Length = 1883

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   RDTSADPV 9
           RD+ ADPV
Sbjct: 445 RDSPADPV 452
>NP_001265238
          Length = 853

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3  DTSADPV 9
          DTS DPV
Sbjct: 33 DTSTDPV 39
>NP_006413
          Length = 853

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3  DTSADPV 9
          DTS DPV
Sbjct: 33 DTSTDPV 39
>NP_061891
          Length = 356

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   TRDTSADPV 9
           +R+TS+DP+
Sbjct: 273 SRETSSDPL 281
>XP_005253722
          Length = 853

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3  DTSADPV 9
          DTS DPV
Sbjct: 33 DTSTDPV 39
>XP_005253721
          Length = 853

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3  DTSADPV 9
          DTS DPV
Sbjct: 33 DTSTDPV 39
>XP_006719014
          Length = 853

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3  DTSADPV 9
          DTS DPV
Sbjct: 33 DTSTDPV 39
>XP_005274112
          Length = 385

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   RDTSADPV 9
           +DTS+DP+
Sbjct: 117 KDTSSDPL 124
>XP_006717990
          Length = 175

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   TRDTSADP 8
           TRD  ADP
Sbjct: 145 TRDKKADP 152
>XP_005263969
          Length = 1844

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   RDTSADPV 9
           RD+ ADPV
Sbjct: 406 RDSPADPV 413
>XP_005263968
          Length = 1861

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   RDTSADPV 9
           RD+ ADPV
Sbjct: 423 RDSPADPV 430
>XP_005263967
          Length = 1899

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   RDTSADPV 9
           RD+ ADPV
Sbjct: 462 RDSPADPV 469
>XP_005263966
          Length = 1900

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   RDTSADPV 9
           RD+ ADPV
Sbjct: 462 RDSPADPV 469
>NP_060563
          Length = 385

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   RDTSADPV 9
           +DTS+DP+
Sbjct: 117 KDTSSDPL 124
>NP_612357
          Length = 352

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   RDTSADP 8
           RDTS DP
Sbjct: 263 RDTSNDP 269
>NP_076915
          Length = 725

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   TSADPV 9
           TSADPV
Sbjct: 295 TSADPV 300
>NP_002445
          Length = 698

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   TSADPV 9
           TSADPV
Sbjct: 268 TSADPV 273
>NP_003939
          Length = 493

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RDTSADP 8
           +DT+ADP
Sbjct: 340 QDTNADP 346
>XP_005255923
          Length = 667

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   TRDTSADPV 9
           T D+SA PV
Sbjct: 164 TADSSAQPV 172
>XP_006714537
          Length = 480

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   TSADPV 9
           TSADPV
Sbjct: 295 TSADPV 300
>XP_006714470
          Length = 477

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RDTSADP 8
           +DT+ADP
Sbjct: 340 QDTNADP 346
>XP_006714469
          Length = 530

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RDTSADP 8
           +DT+ADP
Sbjct: 340 QDTNADP 346
>XP_005263392
          Length = 570

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   RDTSADP 8
           +DT+ADP
Sbjct: 340 QDTNADP 346
>NP_056066
          Length = 823

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   TRDTSADPV 9
           T D+SA PV
Sbjct: 320 TADSSAQPV 328
>NP_003115
          Length = 261

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RDTSADP 8
           R+TS DP
Sbjct: 210 RETSVDP 216
>NP_005532
          Length = 1188

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   TRDTSAD 7
           TRD SAD
Sbjct: 433 TRDDSAD 439
>NP_001017915
          Length = 1189

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   TRDTSAD 7
           TRD SAD
Sbjct: 434 TRDDSAD 440
>NP_005091
          Length = 1782

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3  DTSADP 8
          DT+ADP
Sbjct: 39 DTTADP 44
>NP_001078896
          Length = 509

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   DTSADP 8
           DT+ADP
Sbjct: 409 DTTADP 414
>NP_001078894
          Length = 509

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   DTSADP 8
           DT+ADP
Sbjct: 409 DTTADP 414
>NP_001078897
          Length = 423

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   DTSADP 8
           DT+ADP
Sbjct: 323 DTTADP 328
>NP_000478
          Length = 509

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   DTSADP 8
           DT+ADP
Sbjct: 409 DTTADP 414
>NP_001078895
          Length = 509

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   DTSADP 8
           DT+ADP
Sbjct: 409 DTTADP 414
>XP_006724477
          Length = 488

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   DTSADP 8
           DT+ADP
Sbjct: 388 DTTADP 393
>XP_005267290
          Length = 1782

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3  DTSADP 8
          DT+ADP
Sbjct: 39 DTTADP 44
>XP_006712626
          Length = 314

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   TRDTSADP 8
           T+D+ ADP
Sbjct: 223 TKDSVADP 230
>XP_006712625
          Length = 314

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query

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