Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 19 665 NP_001263689 19 665 NP_001119584 19 665 NP_001119586 19 665 NP_001263625 19 665 NP_001119590 19 665 NP_001263690 19 665 NP_001119585 19 665 NP_001263624 19 665 NP_001119588 19 665 NP_001119587 19 665 NP_001119589 19 665 NP_001137429 17 2528 NP_110411 17 2528 XP_006715633 17 2528 XP_006715632 17 2528 NP_005378 17 4312 NP_624357 17 4312 NP_624358 17 4312 NP_057404 17 4312 XP_006718305 17 4312 XP_006718304 17 4312 XP_006718303 17 4312 XP_005253007 17 4312 NP_001275655 16 7355 NP_653235 16 7355 NP_001099010 16 7355 XP_006718417 16 7355 XP_005253237 16 7355 XP_005253236 16 7355 XP_005264922 16 7355 XP_006713031 16 7355 NP_689935 15 9605 NP_002821 15 9605 NP_001035888 15 9605 NP_004198 15 9605 NP_001193880 15 9605 NP_001193881 15 9605 NP_001035887 15 9605 NP_001193879 15 9605 NP_001191304 15 9605 NP_000899 15 9605 NP_055665 15 9605 NP_006047 15 9605 XP_005271506 15 9605 XP_006718849 15 9605 XP_005248367 15 9605 XP_005265679 15 9605 XP_006712259 15 9605 XP_006712258 15 9605>NP_000537 Length = 393 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVRPMAIY 9 TRVR MAIY Sbjct: 155 TRVRAMAIY 163>NP_001263689 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVRPMAIY 9 TRVR MAIY Sbjct: 116 TRVRAMAIY 124>NP_001119584 Length = 393 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVRPMAIY 9 TRVR MAIY Sbjct: 155 TRVRAMAIY 163>NP_001119586 Length = 341 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVRPMAIY 9 TRVR MAIY Sbjct: 155 TRVRAMAIY 163>NP_001263625 Length = 302 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVRPMAIY 9 TRVR MAIY Sbjct: 116 TRVRAMAIY 124>NP_001119590 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVRPMAIY 9 TRVR MAIY Sbjct: 116 TRVRAMAIY 124>NP_001263690 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVRPMAIY 9 TRVR MAIY Sbjct: 116 TRVRAMAIY 124>NP_001119585 Length = 346 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVRPMAIY 9 TRVR MAIY Sbjct: 155 TRVRAMAIY 163>NP_001263624 Length = 307 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVRPMAIY 9 TRVR MAIY Sbjct: 116 TRVRAMAIY 124>NP_001119588 Length = 209 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVRPMAIY 9 TRVR MAIY Sbjct: 23 TRVRAMAIY 31>NP_001119587 Length = 261 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVRPMAIY 9 TRVR MAIY Sbjct: 23 TRVRAMAIY 31>NP_001119589 Length = 214 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TRVRPMAIY 9 TRVR MAIY Sbjct: 23 TRVRAMAIY 31>NP_001137429 Length = 419 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVRPMAIY 9 R+RP A+Y Sbjct: 403 RIRPSAVY 410>NP_110411 Length = 419 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVRPMAIY 9 R+RP A+Y Sbjct: 403 RIRPSAVY 410>XP_006715633 Length = 419 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVRPMAIY 9 R+RP A+Y Sbjct: 403 RIRPSAVY 410>XP_006715632 Length = 419 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVRPMAIY 9 R+RP A+Y Sbjct: 403 RIRPSAVY 410>NP_005378 Length = 937 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRVRPMAI 8 TRVRP A+ Sbjct: 558 TRVRPKAL 565>NP_624357 Length = 920 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRVRPMAI 8 TRVRP A+ Sbjct: 541 TRVRPKAL 548>NP_624358 Length = 1726 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRVRPMAI 8 TRVRP A+ Sbjct: 541 TRVRPKAL 548>NP_057404 Length = 1800 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRVRPMAI 8 TRVRP A+ Sbjct: 541 TRVRPKAL 548>XP_006718305 Length = 1743 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRVRPMAI 8 TRVRP A+ Sbjct: 558 TRVRPKAL 565>XP_006718304 Length = 1753 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRVRPMAI 8 TRVRP A+ Sbjct: 494 TRVRPKAL 501>XP_006718303 Length = 1792 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRVRPMAI 8 TRVRP A+ Sbjct: 533 TRVRPKAL 540>XP_005253007 Length = 1817 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRVRPMAI 8 TRVRP A+ Sbjct: 558 TRVRPKAL 565>NP_001275655 Length = 535 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RVRPMAIY 9 R RP A+Y Sbjct: 463 RARPRALY 470>NP_653235 Length = 146 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TRVRPMAIY 9 ++ PMAIY Sbjct: 55 SKFNPMAIY 63>NP_001099010 Length = 1117 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRVRPMA 7 TRVRP++ Sbjct: 215 TRVRPLS 221>XP_006718417 Length = 1118 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRVRPMA 7 TRVRP++ Sbjct: 215 TRVRPLS 221>XP_005253237 Length = 1160 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRVRPMA 7 TRVRP++ Sbjct: 258 TRVRPLS 264>XP_005253236 Length = 1161 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRVRPMA 7 TRVRP++ Sbjct: 258 TRVRPLS 264>XP_005264922 Length = 146 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TRVRPMAIY 9 ++ PMAIY Sbjct: 55 SKFNPMAIY 63>XP_006713031 Length = 146 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TRVRPMAIY 9 ++ PMAIY Sbjct: 55 SKFNPMAIY 63>NP_689935 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RVRPMAIY 9 R PMA+Y Sbjct: 304 RKNPMALY 311>NP_002821 Length = 926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VRPMAIY 9 VRP A+Y Sbjct: 601 VRPNAVY 607>NP_001035888 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RVRPMAIY 9 +VRP ++Y Sbjct: 289 KVRPYSVY 296>NP_004198 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RVRPMAIY 9 +VRP ++Y Sbjct: 289 KVRPYSVY 296>NP_001193880 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RVRPMAIY 9 +VRP ++Y Sbjct: 289 KVRPYSVY 296>NP_001193881 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RVRPMAIY 9 +VRP ++Y Sbjct: 289 KVRPYSVY 296>NP_001035887 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RVRPMAIY 9 +VRP ++Y Sbjct: 289 KVRPYSVY 296>NP_001193879 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RVRPMAIY 9 +VRP ++Y Sbjct: 289 KVRPYSVY 296>NP_001191304 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TRVRPMAIY 9 TRVRP Y Sbjct: 70 TRVRPAIEY 78>NP_000899 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TRVRPMAIY 9 TRVRP Y Sbjct: 70 TRVRPAIEY 78>NP_055665 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RVRPMAIY 9 R RP+++Y Sbjct: 492 RPRPLSVY 499>NP_006047 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VRPMAIY 9 VRP A+Y Sbjct: 222 VRPRALY 228>XP_005271506 Length = 415 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RVRPMAIY 9 R PMA+Y Sbjct: 303 RKNPMALY 310>XP_006718849 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RVRPMAIY 9 R PMA+Y Sbjct: 311 RKNPMALY 318>XP_005248367 Length = 290 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TRVRPMAIY 9 TRVRP Y Sbjct: 70 TRVRPAIEY 78>XP_005265679 Length = 858 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RVRPMAIY 9 R RP+++Y Sbjct: 492 RPRPLSVY 499>XP_006712259 Length = 333 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VRPMAIY 9 VRP A+Y Sbjct: 222 VRPRALY 228>XP_006712258 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VRPMAIY 9 VRP A+Y Sbjct: 222 VRPRALY 228Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.338 0.142 0.431 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 464,667 Number of extensions: 453 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |