Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001004484 20 509 NP_056372 18 1482 NP_116185 17 3301 NP_742066 17 3301 XP_006712004 17 3301 NP_001185907 16 5631 NP_073570 16 5631 NP_001185908 16 5631 NP_001185909 16 5631 NP_835461 16 5631 XP_006723798 16 5631 XP_005271177 16 5631 NP_004597 16 7355 NP_001273003 16 7355 NP_620278 16 7355 NP_006608 16 7355 NP_001095841 16 7355 NP_079231 16 7355 XP_006724745 16 7355 XP_006724744 16 7355 XP_005262354 16 7355 XP_006724743 16 7355 XP_005262353 16 7355 XP_005262352 16 7355 XP_006724383 16 7355 NP_722516 16 7355 NP_001128360 15 9605 NP_001006642 15 9605 NP_057376 15 9605 NP_001252543 15 9605 NP_001006643 15 9605 NP_443133 15 9605 NP_005549 15 9605 NP_001263266 15 9605 NP_001263265 15 9605 NP_001269887 15 9605 NP_004837 15 9605 NP_008976 15 9605 XP_006717011 15 9605 XP_005251745 15 9605 XP_005247032 15 9605>NP_001004484 Length = 346 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TTQQAGDKE 9 TTQQAGD E Sbjct: 23 TTQQAGDLE 31>NP_056372 Length = 1954 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TQQAGDKE 9 TQQ GDKE Sbjct: 1680 TQQNGDKE 1687>NP_116185 Length = 352 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QQAGDKE 9 QQAGD+E Sbjct: 43 QQAGDQE 49>NP_742066 Length = 1493 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TQQAGDKE 9 TQQ GD+E Sbjct: 1091 TQQNGDRE 1098>XP_006712004 Length = 1488 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TQQAGDKE 9 TQQ GD+E Sbjct: 1086 TQQNGDRE 1093>NP_001185907 Length = 399 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TTQQAG 6 TTQQAG Sbjct: 326 TTQQAG 331>NP_073570 Length = 429 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TTQQAG 6 TTQQAG Sbjct: 356 TTQQAG 361>NP_001185908 Length = 424 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TTQQAG 6 TTQQAG Sbjct: 351 TTQQAG 356>NP_001185909 Length = 349 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TTQQAG 6 TTQQAG Sbjct: 276 TTQQAG 281>NP_835461 Length = 904 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TTQQAG 6 TTQQAG Sbjct: 856 TTQQAG 861>XP_006723798 Length = 916 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TTQQAGDKE 9 T+ QAGD+E Sbjct: 488 TSFQAGDQE 496>XP_005271177 Length = 403 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TTQQAG 6 TTQQAG Sbjct: 330 TTQQAG 335>NP_004597 Length = 1893 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TQQAGDKE 9 TQQ DKE Sbjct: 994 TQQKDDKE 1001>NP_001273003 Length = 1895 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TQQAGDKE 9 TQQ DKE Sbjct: 994 TQQKDDKE 1001>NP_620278 Length = 1872 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TQQAGDKE 9 TQQ DKE Sbjct: 973 TQQKDDKE 980>NP_006608 Length = 1621 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TQQAGDKE 9 TQ+ GD+E Sbjct: 1607 TQREGDRE 1614>NP_001095841 Length = 684 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTQQAGDKE 9 ++QQ GD+E Sbjct: 654 SSQQLGDQE 662>NP_079231 Length = 684 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTQQAGDKE 9 ++QQ GD+E Sbjct: 654 SSQQLGDQE 662>XP_006724745 Length = 1800 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TQQAGDKE 9 TQQ DKE Sbjct: 867 TQQKDDKE 874>XP_006724744 Length = 1851 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TQQAGDKE 9 TQQ DKE Sbjct: 994 TQQKDDKE 1001>XP_005262354 Length = 1906 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TQQAGDKE 9 TQQ DKE Sbjct: 973 TQQKDDKE 980>XP_006724743 Length = 1924 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TQQAGDKE 9 TQQ DKE Sbjct: 994 TQQKDDKE 1001>XP_005262353 Length = 1926 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TQQAGDKE 9 TQQ DKE Sbjct: 994 TQQKDDKE 1001>XP_005262352 Length = 1927 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TQQAGDKE 9 TQQ DKE Sbjct: 994 TQQKDDKE 1001>XP_006724383 Length = 594 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTQQAGDKE 9 ++QQ GD+E Sbjct: 564 SSQQLGDQE 572>NP_722516 Length = 1826 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TQQAGDKE 9 TQQ DKE Sbjct: 992 TQQKDDKE 999>NP_001128360 Length = 1358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 QQAGDKE 9 QQAGD + Sbjct: 596 QQAGDSD 602>NP_001006642 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QAGDKE 9 QAGDK+ Sbjct: 91 QAGDKD 96>NP_057376 Length = 704 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTQQAGDKE 9 +TQ A DKE Sbjct: 60 STQTAEDKE 68>NP_001252543 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QAGDKE 9 QAGDK+ Sbjct: 77 QAGDKD 82>NP_001006643 Length = 489 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QAGDKE 9 QAGDK+ Sbjct: 77 QAGDKD 82>NP_443133 Length = 469 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QAGDKE 9 QAGDK+ Sbjct: 57 QAGDKD 62>NP_005549 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 TQQAGDKE 9 TQ++GD++ Sbjct: 482 TQESGDQD 489>NP_001263266 Length = 189 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTQQAGDKE 9 +TQ+ G+KE Sbjct: 23 STQKDGEKE 31>NP_001263265 Length = 234 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTQQAGDKE 9 +TQ+ G+KE Sbjct: 23 STQKDGEKE 31>NP_001269887 Length = 236 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTQQAGDKE 9 +TQ+ G+KE Sbjct: 23 STQKDGEKE 31>NP_004837 Length = 245 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTQQAGDKE 9 +TQ+ G+KE Sbjct: 23 STQKDGEKE 31>NP_008976 Length = 399 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QQAGDKE 9 Q+AGDK+ Sbjct: 188 QKAGDKK 194>XP_006717011 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QAGDKE 9 QAGDK+ Sbjct: 57 QAGDKD 62>XP_005251745 Length = 515 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QAGDKE 9 QAGDK+ Sbjct: 91 QAGDKD 96>XP_005247032 Length = 200 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTQQAGDKE 9 +TQ+ G+KE Sbjct: 23 STQKDGEKE 31Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.287 0.107 0.265 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 657,956 Number of extensions: 982 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |