Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 20 509 NP_000170 20 509 NP_001268422 20 509 NP_001268423 20 509 XP_005264328 20 509 NP_714913 19 869 XP_005262943 19 869 XP_005262942 19 869 NP_008851 17 2528 NP_001189364 17 2528 NP_001159436 17 2528 NP_001159435 17 2528 NP_001008225 17 4312 NP_060473 17 4312 NP_003354 17 4312 NP_955475 17 4312 XP_005254586 17 4312 XP_005254585 17 4312 XP_005254584 17 4312 NP_079461 16 5631 XP_006721874 16 5631 XP_006721873 16 5631 XP_005257260 16 5631 XP_005257258 16 5631 XP_006721872 16 5631 XP_006721871 16 5631 XP_006721870 16 5631 XP_006721869 16 5631 XP_006713566 16 5631 NP_001861 16 5631 NP_055812 16 7355 NP_060811 16 7355 NP_001265460 16 7355 NP_001265462 16 7355 NP_001265461 16 7355 XP_006725075 16 7355 XP_006725074 16 7355 XP_006725073 16 7355 XP_005250290 16 7355 XP_005267103 16 7355 XP_006715573 16 7355 XP_006715572 16 7355 NP_004448 16 7355 NP_976251 16 7355 NP_009193 15 9605 NP_001116849 15 9605 NP_937983 15 9605 NP_001073291 15 9605 NP_000417 15 9605 NP_001180305 15 9605 NP_004920 15 9605 NP_079414 15 9605 NP_065104 15 9605 XP_005254620 15 9605 XP_005266602 15 9605 XP_005267039 15 9605 XP_005267038 15 9605 XP_005263481 15 9605>NP_001268421 Length = 1230 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TTYSKNKII 9 TTYSK KII Sbjct: 718 TTYSKKKII 726>NP_000170 Length = 1360 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TTYSKNKII 9 TTYSK KII Sbjct: 848 TTYSKKKII 856>NP_001268422 Length = 1058 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TTYSKNKII 9 TTYSK KII Sbjct: 546 TTYSKKKII 554>NP_001268423 Length = 1058 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TTYSKNKII 9 TTYSK KII Sbjct: 546 TTYSKKKII 554>XP_005264328 Length = 1261 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TTYSKNKII 9 TTYSK KII Sbjct: 749 TTYSKKKII 757>NP_714913 Length = 293 Score = 18.9 bits (37), Expect = 869 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TYSKNKII 9 TYSKNK++ Sbjct: 52 TYSKNKVL 59>XP_005262943 Length = 293 Score = 18.9 bits (37), Expect = 869 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TYSKNKII 9 TYSKNK++ Sbjct: 52 TYSKNKVL 59>XP_005262942 Length = 305 Score = 18.9 bits (37), Expect = 869 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TYSKNKII 9 TYSKNK++ Sbjct: 64 TYSKNKVL 71>NP_008851 Length = 1998 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TYSKNKI 8 TY+KNKI Sbjct: 1930 TYNKNKI 1936>NP_001189364 Length = 2009 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TYSKNKI 8 TY+KNKI Sbjct: 1941 TYNKNKI 1947>NP_001159436 Length = 1981 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TYSKNKI 8 TY+KNKI Sbjct: 1913 TYNKNKI 1919>NP_001159435 Length = 2009 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TYSKNKI 8 TY+KNKI Sbjct: 1941 TYNKNKI 1947>NP_001008225 Length = 1403 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TTYSKNKII 9 T+YS+N+I+ Sbjct: 421 TSYSENEIL 429>NP_060473 Length = 1416 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TTYSKNKII 9 T+YS+N+I+ Sbjct: 434 TSYSENEIL 442>NP_003354 Length = 963 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TTYSKNKI 8 T Y+KNK+ Sbjct: 883 TAYAKNKL 890>NP_955475 Length = 916 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TTYSKNKI 8 T Y+KNK+ Sbjct: 836 TAYAKNKL 843>XP_005254586 Length = 1392 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TTYSKNKII 9 T+YS+N+I+ Sbjct: 410 TSYSENEIL 418>XP_005254585 Length = 1405 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TTYSKNKII 9 T+YS+N+I+ Sbjct: 423 TSYSENEIL 431>XP_005254584 Length = 1411 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TTYSKNKII 9 T+YS+N+I+ Sbjct: 429 TSYSENEIL 437>NP_079461 Length = 1990 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TTYSKNKI 8 +TYS NKI Sbjct: 235 STYSLNKI 242>XP_006721874 Length = 1399 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TTYSKNKI 8 +TYS NKI Sbjct: 309 STYSLNKI 316>XP_006721873 Length = 1409 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TTYSKNKI 8 +TYS NKI Sbjct: 309 STYSLNKI 316>XP_005257260 Length = 1990 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TTYSKNKI 8 +TYS NKI Sbjct: 235 STYSLNKI 242>XP_005257258 Length = 2000 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TTYSKNKI 8 +TYS NKI Sbjct: 235 STYSLNKI 242>XP_006721872 Length = 2037 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TTYSKNKI 8 +TYS NKI Sbjct: 272 STYSLNKI 279>XP_006721871 Length = 2037 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TTYSKNKI 8 +TYS NKI Sbjct: 272 STYSLNKI 279>XP_006721870 Length = 2064 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TTYSKNKI 8 +TYS NKI Sbjct: 309 STYSLNKI 316>XP_006721869 Length = 2074 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TTYSKNKI 8 +TYS NKI Sbjct: 309 STYSLNKI 316>XP_006713566 Length = 355 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TYSKNKII 9 TY +NKI+ Sbjct: 196 TYGRNKIM 203>NP_001861 Length = 417 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TYSKNKII 9 TY +NKI+ Sbjct: 196 TYGRNKIM 203>NP_055812 Length = 442 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TTYSKNKI 8 T YS NKI Sbjct: 282 TAYSLNKI 289>NP_060811 Length = 678 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TTYSKNK 7 T+Y KNK Sbjct: 634 TSYEKNK 640>NP_001265460 Length = 631 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TTYSKNK 7 T+Y KNK Sbjct: 587 TSYEKNK 593>NP_001265462 Length = 605 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TTYSKNK 7 T+Y KNK Sbjct: 561 TSYEKNK 567>NP_001265461 Length = 552 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TTYSKNK 7 T+Y KNK Sbjct: 508 TSYEKNK 514>XP_006725075 Length = 552 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TTYSKNK 7 T+Y KNK Sbjct: 508 TSYEKNK 514>XP_006725074 Length = 678 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TTYSKNK 7 T+Y KNK Sbjct: 634 TSYEKNK 640>XP_006725073 Length = 688 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TTYSKNK 7 T+Y KNK Sbjct: 644 TSYEKNK 650>XP_005250290 Length = 413 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TTYSKNKI 8 T YS NKI Sbjct: 253 TAYSLNKI 260>XP_005267103 Length = 552 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TTYSKNK 7 T+Y KNK Sbjct: 508 TSYEKNK 514>XP_006715573 Length = 678 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TTYSKNK 7 T+Y KNK Sbjct: 634 TSYEKNK 640>XP_006715572 Length = 688 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TTYSKNK 7 T+Y KNK Sbjct: 644 TSYEKNK 650>NP_004448 Length = 720 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TYSKNK 7 TY+KNK Sbjct: 93 TYAKNK 98>NP_976251 Length = 720 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TYSKNK 7 TY+KNK Sbjct: 93 TYAKNK 98>NP_009193 Length = 189 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 TYSKNKI 8 TYS+N++ Sbjct: 140 TYSENRV 146>NP_001116849 Length = 189 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 TYSKNKI 8 TYS+N++ Sbjct: 140 TYSENRV 146>NP_937983 Length = 1132 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TTYSKNKI 8 TT+ KN++ Sbjct: 566 TTFQKNRL 573>NP_001073291 Length = 3118 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SKNKII 9 SKNKII Sbjct: 2087 SKNKII 2092>NP_000417 Length = 3122 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SKNKII 9 SKNKII Sbjct: 2087 SKNKII 2092>NP_001180305 Length = 1069 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TTYSKNKI 8 TT+ KN++ Sbjct: 566 TTFQKNRL 573>NP_004920 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 TTYSKN 6 TTY KN Sbjct: 232 TTYKKN 237>NP_079414 Length = 944 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 TYSKNKII 9 T+SK+K++ Sbjct: 78 TFSKDKLV 85>NP_065104 Length = 362 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YSKNKII 9 YSK KI+ Sbjct: 109 YSKRKIV 115>XP_005254620 Length = 281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YSKNKII 9 YSK KI+ Sbjct: 28 YSKRKIV 34>XP_005266602 Length = 922 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 TYSKNKII 9 T+SK+K++ Sbjct: 56 TFSKDKLV 63>XP_005267039 Length = 3206 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SKNKII 9 SKNKII Sbjct: 2175 SKNKII 2180>XP_005267038 Length = 3210 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SKNKII 9 SKNKII Sbjct: 2175 SKNKII 2180>XP_005263481 Length = 189 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 TYSKNKI 8 TYS+N++ Sbjct: 140 TYSENRV 146Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.308 0.121 0.308 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 574,065 Number of extensions: 926 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |