Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

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• Cancer-specific
• Epitope Search
• Data Retrieval
• Browse Gene
• Browse Tissue
• Sequence Similarity
• Partially Personalized
• Submit a Protein
• Vaccine Target
• Proteome Data
• NGS data
• BLAST & Predict
• Fully Personalized
• Proteins Pair
• Proteome Pair
• Advanced Tools
• Epitope Mapping
• Cross Reactivity
• Important Information
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Blast-Search of mutated query peptide against human proteome

Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLSWSASG 9 V +WSASG Sbjct: 117 VFTWSASG 124

>NP_009197
          Length = 388

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   VLSWSASG 9
           V +WSASG
Sbjct: 143 VFTWSASG 150

>NP_001138521
          Length = 279

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  VLSWSASG 9
          V +WSASG
Sbjct: 34 VFTWSASG 41

>NP_001122312
          Length = 2161

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  TVLSWSAS 8
          TVLSW A+
Sbjct: 49 TVLSWQAA 56

>NP_001122311
          Length = 2137

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  TVLSWSAS 8
          TVLSW A+
Sbjct: 49 TVLSWQAA 56

>NP_000711
          Length = 2181

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  TVLSWSAS 8
          TVLSW A+
Sbjct: 49 TVLSWQAA 56

>XP_005276706
          Length = 254

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  VLSWSASG 9
          +L WSA+G
Sbjct: 13 ILQWSAAG 20

>XP_005260238
          Length = 254

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  VLSWSASG 9
          +L WSA+G
Sbjct: 13 ILQWSAAG 20

>XP_005265505
          Length = 2146

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  TVLSWSAS 8
          TVLSW A+
Sbjct: 49 TVLSWQAA 56

>XP_006713388
          Length = 2194

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  TVLSWSAS 8
          TVLSW A+
Sbjct: 49 TVLSWQAA 56

>XP_005275900
          Length = 254

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  VLSWSASG 9
          +L WSA+G
Sbjct: 13 ILQWSAAG 20

>NP_000238
          Length = 383

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1  TVLSWSAS 8
          TVLSW  S
Sbjct: 33 TVLSWDGS 40

>NP_001170990
          Length = 332

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1  TVLSWSAS 8
          TVLSW  S
Sbjct: 33 TVLSWDGS 40

>XP_006726603
          Length = 1264

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   TVLSWSASG 9
           T+  W ASG
Sbjct: 572 TITQWEASG 580

>XP_006725215
          Length = 1264

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   TVLSWSASG 9
           T+  W ASG
Sbjct: 572 TITQWEASG 580

>XP_006721525
          Length = 274

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   TVLSWSASG 9
           T+L W +SG
Sbjct: 260 TILRWRSSG 268

>XP_006719239
          Length = 1066

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   TVLSWSASG 9
           T+  W ASG
Sbjct: 790 TITQWEASG 798

>XP_006719237
          Length = 1263

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   TVLSWSASG 9
           T+  W ASG
Sbjct: 572 TITQWEASG 580

>NP_958443
          Length = 711

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 7/7 (1