Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005179 18 1482 NP_689549 18 1935 NP_001438 18 1935 XP_006714824 18 1935 NP_000493 17 4312 NP_057028 17 4312 NP_001139287 17 4312 XP_006722191 17 4312 NP_001009571 16 7355 NP_060424 16 7355 NP_001161412 16 7355 XP_005250765 16 7355 XP_005250764 16 7355 XP_005250763 16 7355 XP_005250762 16 7355 XP_005250761 16 7355 XP_005250760 16 7355 XP_005250759 16 7355 XP_005250758 16 7355 XP_005250757 16 7355 XP_005250756 16 7355 XP_005250755 16 7355 XP_005250754 16 7355 XP_005250753 16 7355 XP_005250752 16 7355 NP_001009894 16 7355 NP_001276090 15 9605 NP_001276089 15 9605 NP_005922 15 9605 NP_005304 15 9605 NP_001186623 15 9605 NP_001186622 15 9605 NP_001186621 15 9605 NP_001073341 15 9605 NP_003579 15 9605 NP_057655 15 9605 NP_003031 15 9605 XP_006726158 15 9605 XP_006726065 15 9605 XP_006724848 15 9605 XP_006724847 15 9605 XP_005262538 15 9605 XP_006716157 15 9605 XP_006713999 15 9605 XP_005246782 15 9605 XP_005246780 15 9605 XP_005246776 15 9605 XP_006712723 15 9605 XP_006712722 15 9605 XP_005246775 15 9605>NP_005179 Length = 906 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VLARRTLS 8 VLARRTLS Sbjct: 784 VLARRTLS 791>NP_689549 Length = 1066 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLARRTLSH 9 +LAR+ LSH Sbjct: 60 ILARKNLSH 68>NP_001438 Length = 4349 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LARRTLSH 9 LARRTL H Sbjct: 1008 LARRTLCH 1015>XP_006714824 Length = 4349 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LARRTLSH 9 LARRTL H Sbjct: 1008 LARRTLCH 1015>NP_000493 Length = 715 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ARRTLSH 9 ARRTL H Sbjct: 444 ARRTLGH 450>NP_057028 Length = 439 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLARRTLSH 9 ++ARR LSH Sbjct: 93 LVARRILSH 101>NP_001139287 Length = 594 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLARRTLSH 9 ++ARR LSH Sbjct: 93 LVARRILSH 101>XP_006722191 Length = 715 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ARRTLSH 9 ARRTL H Sbjct: 444 ARRTLGH 450>NP_001009571 Length = 1255 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLARRTLSH 9 +L R+TL H Sbjct: 646 ILQRQTLDH 654>NP_060424 Length = 1296 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLARRTLSH 9 +L R+TL H Sbjct: 649 ILQRQTLDH 657>NP_001161412 Length = 1300 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLARRTLSH 9 +L R+TL H Sbjct: 649 ILQRQTLDH 657>XP_005250765 Length = 1250 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLARRTLSH 9 +L R+TL H Sbjct: 646 ILQRQTLDH 654>XP_005250764 Length = 1258 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLARRTLSH 9 +L R+TL H Sbjct: 649 ILQRQTLDH 657>XP_005250763 Length = 1260 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLARRTLSH 9 +L R+TL H Sbjct: 646 ILQRQTLDH 654>XP_005250762 Length = 1260 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLARRTLSH 9 +L R+TL H Sbjct: 649 ILQRQTLDH 657>XP_005250761 Length = 1265 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLARRTLSH 9 +L R+TL H Sbjct: 649 ILQRQTLDH 657>XP_005250760 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLARRTLSH 9 +L R+TL H Sbjct: 649 ILQRQTLDH 657>XP_005250759 Length = 1293 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLARRTLSH 9 +L R+TL H Sbjct: 646 ILQRQTLDH 654>XP_005250758 Length = 1298 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLARRTLSH 9 +L R+TL H Sbjct: 649 ILQRQTLDH 657>XP_005250757 Length = 1300 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLARRTLSH 9 +L R+TL H Sbjct: 646 ILQRQTLDH 654>XP_005250756 Length = 1301 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLARRTLSH 9 +L R+TL H Sbjct: 649 ILQRQTLDH 657>XP_005250755 Length = 1303 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLARRTLSH 9 +L R+TL H Sbjct: 649 ILQRQTLDH 657>XP_005250754 Length = 1305 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLARRTLSH 9 +L R+TL H Sbjct: 646 ILQRQTLDH 654>XP_005250753 Length = 1305 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLARRTLSH 9 +L R+TL H Sbjct: 649 ILQRQTLDH 657>XP_005250752 Length = 1308 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLARRTLSH 9 +L R+TL H Sbjct: 649 ILQRQTLDH 657>NP_001009894 Length = 325 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLARRTLSH 9 VLA T+SH Sbjct: 34 VLATETVSH 42>NP_001276090 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RRTLSH 9 RRTL+H Sbjct: 97 RRTLTH 102>NP_001276089 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RRTLSH 9 RRTL+H Sbjct: 65 RRTLTH 70>NP_005922 Length = 383 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RRTLSH 9 RRTL+H Sbjct: 97 RRTLTH 102>NP_005304 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLARRTLSH 9 V +R+T SH Sbjct: 301 VASRKTFSH 309>NP_001186623 Length = 1227 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RRTLSH 9 RRTL+H Sbjct: 363 RRTLAH 368>NP_001186622 Length = 1232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RRTLSH 9 RRTL+H Sbjct: 368 RRTLAH 373>NP_001186621 Length = 1241 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RRTLSH 9 RRTL+H Sbjct: 377 RRTLAH 382>NP_001073341 Length = 895 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RRTLSH 9 R+TLSH Sbjct: 843 RKTLSH 848>NP_003579 Length = 913 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RRTLSH 9 R+TLSH Sbjct: 861 RKTLSH 866>NP_057655 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LARRTLSH 9 +A+R LSH Sbjct: 187 IAKRQLSH 194>NP_003031 Length = 1241 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RRTLSH 9 RRTL+H Sbjct: 377 RRTLAH 382>XP_006726158 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RRTLSH 9 RRTL+H Sbjct: 65 RRTLTH 70>XP_006726065 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RRTLSH 9 RRTL+H Sbjct: 65 RRTLTH 70>XP_006724848 Length = 900 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RRTLSH 9 R+TLSH Sbjct: 848 RKTLSH 853>XP_006724847 Length = 902 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RRTLSH 9 R+TLSH Sbjct: 850 RKTLSH 855>XP_005262538 Length = 915 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RRTLSH 9 R+TLSH Sbjct: 863 RKTLSH 868>XP_006716157 Length = 666 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RRTLSH 9 RRTL+H Sbjct: 377 RRTLAH 382>XP_006713999 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ARRTLSH 9 ARR LSH Sbjct: 36 ARRGLSH 42Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ARRTLSH 9 ARR LSH Sbjct: 209 ARRGLSH 215>XP_005246782 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RRTLSH 9 +RTLSH Sbjct: 690 KRTLSH 695>XP_005246780 Length = 958 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RRTLSH 9 +RTLSH Sbjct: 916 KRTLSH 921>XP_005246776 Length = 980 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RRTLSH 9 +RTLSH Sbjct: 938 KRTLSH 943>XP_006712723 Length = 980 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RRTLSH 9 +RTLSH Sbjct: 938 KRTLSH 943>XP_006712722 Length = 980 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RRTLSH 9 +RTLSH Sbjct: 938 KRTLSH 943>XP_005246775 Length = 980 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RRTLSH 9 +RTLSH Sbjct: 938 KRTLSH 943Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.334 0.132 0.362 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 374,576 Number of extensions: 573 Number of successful extensions: 51 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |