Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 20 509 NP_000170 20 509 NP_001268422 20 509 NP_001268423 20 509 XP_005264328 20 509 NP_060866 17 3301 NP_000375 17 4312 NP_001274420 17 4312 XP_006712026 17 4312 XP_005264244 17 4312 NP_859076 17 4312 NP_001207417 16 5631 NP_001073922 16 5631 NP_001248 16 5631 NP_001207419 16 5631 NP_001207418 16 5631 NP_065857 16 7355 NP_001019389 16 7355 NP_065944 16 7355 NP_001229277 16 7355 NP_003557 16 7355 XP_005267311 16 7355 XP_005267310 16 7355 XP_005267307 16 7355 XP_006720066 16 7355 XP_006719694 16 7355 XP_006717931 16 7355 XP_006717930 16 7355 XP_005269915 16 7355 XP_005269914 16 7355 XP_006717929 16 7355 XP_006717928 16 7355 NP_001006940 16 7355 NP_057526 15 9605 NP_001185470 15 9605 NP_001035548 15 9605 NP_001026 15 9605 NP_775759 15 9605 NP_001275933 15 9605 NP_001275931 15 9605 NP_116559 15 9605 NP_002898 15 9605 NP_001120795 15 9605 NP_006286 15 9605 NP_067037 15 9605 XP_005275347 15 9605 XP_005275078 15 9605 XP_005272926 15 9605 XP_005274943 15 9605 XP_006719196 15 9605 XP_005253521 15 9605 XP_005253519 15 9605 XP_005253520 15 9605 XP_005253518 15 9605 XP_006716001 15 9605 XP_005249419 15 9605 XP_005272073 15 9605 XP_005272072 15 9605 XP_005271931 15 9605 XP_006711873 15 9605 XP_006711872 15 9605 XP_006711871 15 9605 XP_006711870 15 9605 XP_006711869 15 9605 XP_006711868 15 9605 XP_006711867 15 9605 XP_006711866 15 9605 XP_006711865 15 9605 XP_005245269 15 9605 XP_006711403 15 9605 NP_000836 15 9605 NP_653300 15 9605>NP_001268421 Length = 1230 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VVPDKISKV 9 VVPDKIS+V Sbjct: 670 VVPDKISEV 678>NP_000170 Length = 1360 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VVPDKISKV 9 VVPDKIS+V Sbjct: 800 VVPDKISEV 808>NP_001268422 Length = 1058 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VVPDKISKV 9 VVPDKIS+V Sbjct: 498 VVPDKISEV 506>NP_001268423 Length = 1058 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VVPDKISKV 9 VVPDKIS+V Sbjct: 498 VVPDKISEV 506>XP_005264328 Length = 1261 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VVPDKISKV 9 VVPDKIS+V Sbjct: 701 VVPDKISEV 709>NP_060866 Length = 378 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VVPDKISK 8 VVPDK+ K Sbjct: 266 VVPDKMQK 273>NP_000375 Length = 4563 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VPDKISKV 9 VPD +SKV Sbjct: 726 VPDGVSKV 733>NP_001274420 Length = 1795 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VVPDKIS 7 +VPDK+S Sbjct: 1467 IVPDKLS 1473>XP_006712026 Length = 937 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VVPDKIS 7 +VPDK+S Sbjct: 609 IVPDKLS 615>XP_005264244 Length = 1795 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VVPDKIS 7 +VPDK+S Sbjct: 1467 IVPDKLS 1473>NP_859076 Length = 378 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VVPDKISK 8 +VPDK+ K Sbjct: 266 IVPDKMQK 273>NP_001207417 Length = 760 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VPDKISKV 9 VPDK+ K+ Sbjct: 674 VPDKVWKI 681>NP_001073922 Length = 2190 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VVPDKISKV 9 V PD ISKV Sbjct: 1536 VEPDLISKV 1544>NP_001248 Length = 713 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VPDKISKV 9 VPDK+ K+ Sbjct: 627 VPDKVWKI 634>NP_001207419 Length = 459 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VPDKISKV 9 VPDK+ K+ Sbjct: 373 VPDKVWKI 380>NP_001207418 Length = 674 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VPDKISKV 9 VPDK+ K+ Sbjct: 588 VPDKVWKI 595>NP_065857 Length = 769 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VVPDKISKV 9 +VPD+I ++ Sbjct: 58 IVPDEIEEI 66>NP_001019389 Length = 736 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VVPDKISKV 9 +VPD+I ++ Sbjct: 58 IVPDEIEEI 66>NP_065944 Length = 1701 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VVPDKIS 7 +VP+KIS Sbjct: 160 IVPEKIS 166>NP_001229277 Length = 104 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VVPDKIS 7 +VPDK+S Sbjct: 44 LVPDKLS 50>NP_003557 Length = 1411 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VPDKISKV 9 V DK+SKV Sbjct: 858 VKDKLSKV 865>XP_005267311 Length = 755 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VVPDKISKV 9 +VPD+I ++ Sbjct: 58 IVPDEIEEI 66>XP_005267310 Length = 769 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VVPDKISKV 9 +VPD+I ++ Sbjct: 58 IVPDEIEEI 66>XP_005267307 Length = 788 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VVPDKISKV 9 +VPD+I ++ Sbjct: 58 IVPDEIEEI 66>XP_006720066 Length = 802 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VVPDKISKV 9 +VPD+I ++ Sbjct: 58 IVPDEIEEI 66>XP_006719694 Length = 1465 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VPDKISKV 9 V DK+SKV Sbjct: 912 VKDKLSKV 919>XP_006717931 Length = 255 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VPDKISK 8 +PD ISK Sbjct: 65 IPDSISK 71>XP_006717930 Length = 261 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VPDKISK 8 +PD ISK Sbjct: 65 IPDSISK 71>XP_005269915 Length = 265 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VPDKISK 8 +PD ISK Sbjct: 65 IPDSISK 71>XP_005269914 Length = 265 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VPDKISK 8 +PD ISK Sbjct: 65 IPDSISK 71>XP_006717929 Length = 265 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VPDKISK 8 +PD ISK Sbjct: 65 IPDSISK 71>XP_006717928 Length = 265 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VPDKISK 8 +PD ISK Sbjct: 65 IPDSISK 71>NP_001006940 Length = 261 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VPDKISK 8 +PD ISK Sbjct: 65 IPDSISK 71>NP_057526 Length = 948 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VPDKISK 8 VPDKI++ Sbjct: 272 VPDKINQ 278>NP_001185470 Length = 941 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VPDKISK 8 VPDKI++ Sbjct: 272 VPDKINQ 278>NP_001035548 Length = 941 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VPDKISK 8 VPDKI++ Sbjct: 272 VPDKINQ 278>NP_001026 Length = 4967 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VVPDKISK 8 +VPD++ K Sbjct: 1354 LVPDRVDK 1361>NP_775759 Length = 719 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VVPDKI 6 VVPDK+ Sbjct: 606 VVPDKL 611>NP_001275933 Length = 657 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VVPDKI 6 VVPDK+ Sbjct: 544 VVPDKL 549>NP_001275931 Length = 719 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VVPDKI 6 VVPDK+ Sbjct: 606 VVPDKL 611>NP_116559 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VVPDKISK 8 V P+KI+K Sbjct: 189 VTPEKIAK 196>NP_002898 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VVPDKISK 8 V P+KI+K Sbjct: 189 VTPEKIAK 196>NP_001120795 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 PDKISKV 9 PDKIS V Sbjct: 144 PDKISGV 150>NP_006286 Length = 1264 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VVPDKIS 7 V PDKIS Sbjct: 773 VSPDKIS 779>NP_067037 Length = 329 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DKISKV 9 DKISKV Sbjct: 259 DKISKV 264>XP_005275347 Length = 1265 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VVPDKIS 7 V PDKIS Sbjct: 774 VSPDKIS 780>XP_005275078 Length = 1265 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VVPDKIS 7 V PDKIS Sbjct: 774 VSPDKIS 780>XP_005272926 Length = 1265 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VVPDKIS 7 V PDKIS Sbjct: 774 VSPDKIS 780>XP_005274943 Length = 1265 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VVPDKIS 7 V PDKIS Sbjct: 774 VSPDKIS 780>XP_006719196 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VVPDKISK 8 V P+KI+K Sbjct: 189 VTPEKIAK 196>XP_005253521 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VVPDKISK 8 V P+KI+K Sbjct: 189 VTPEKIAK 196>XP_005253519 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VVPDKISK 8 V P+KI+K Sbjct: 189 VTPEKIAK 196>XP_005253520 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VVPDKISK 8 V P+KI+K Sbjct: 189 VTPEKIAK 196>XP_005253518 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VVPDKISK 8 V P+KI+K Sbjct: 189 VTPEKIAK 196>XP_006716001 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 PDKISKV 9 PDKIS V Sbjct: 144 PDKISGV 150>XP_005249419 Length = 1265 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VVPDKIS 7 V PDKIS Sbjct: 774 VSPDKIS 780>XP_005272073 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VPDKISK 8 VPDKI++ Sbjct: 272 VPDKINQ 278>XP_005272072 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VPDKISK 8 VPDKI++ Sbjct: 272 VPDKINQ 278>XP_005271931 Length = 719 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VVPDKI 6 VVPDK+ Sbjct: 606 VVPDKL 611>XP_006711873 Length = 4954 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VVPDKISK 8 +VPD++ K Sbjct: 1353 LVPDRVDK 1360>XP_006711872 Length = 2735 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VVPDKISK 8 +VPD++ K Sbjct: 1354 LVPDRVDK 1361>XP_006711871 Length = 4906 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VVPDKISK 8 +VPD++ K Sbjct: 1354 LVPDRVDK 1361>XP_006711870 Length = 4965 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VVPDKISK 8 +VPD++ K Sbjct: 1354 LVPDRVDK 1361>XP_006711869 Length = 4973 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VVPDKISK 8 +VPD++ K Sbjct: 1354 LVPDRVDK 1361>XP_006711868 Length = 4975 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VVPDKISK 8 +VPD++ K Sbjct: 1354 LVPDRVDK 1361>XP_006711867 Length = 4977 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VVPDKISK 8 +VPD++ K Sbjct: 1354 LVPDRVDK 1361>XP_006711866 Length = 4984 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VVPDKISK 8 +VPD++ K Sbjct: 1353 LVPDRVDK 1360>XP_006711865 Length = 4985 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VVPDKISK 8 +VPD++ K Sbjct: 1354 LVPDRVDK 1361>XP_005245269 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VPDKISK 8 VPD +SK Sbjct: 108 VPDAVSK 114>XP_006711403 Length = 961 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VPDKISK 8 VPD +SK Sbjct: 537 VPDAVSK 543>NP_000836 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 PDKISKV 9 PDKIS V Sbjct: 144 PDKISGV 150>NP_653300 Length = 1029 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VPDKISK 8 VPD +SK Sbjct: 605 VPDAVSK 611Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.135 0.355 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 647,435 Number of extensions: 731 Number of successful extensions: 72 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |