Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005148 19 869 NP_009297 19 869 NP_001161710 19 869 NP_001161709 19 869 NP_001161708 19 869 NP_009298 19 869 NP_001129473 19 869 NP_005149 19 869 NP_001161711 19 869 XP_005245145 19 869 NP_001129472 19 869 NP_072089 17 4312 NP_001273572 17 4312 NP_057026 17 4312 NP_001020016 17 4312 NP_964012 17 4312 NP_008865 17 4312 NP_001248309 17 4312 XP_005272689 17 4312 XP_006716632 17 4312 XP_005250984 17 4312 XP_006716631 17 4312 XP_005250983 17 4312 XP_006710903 17 4312 NP_055132 16 5631 NP_001009 16 5631 NP_075048 16 5631 NP_001124397 16 7355 NP_055405 16 7355 NP_055906 16 7355 NP_001171671 16 7355 NP_006768 16 7355 NP_001013652 16 7355 XP_006720146 16 7355 XP_005267508 16 7355 XP_006712074 16 7355 XP_005264351 16 7355 XP_006712072 16 7355 XP_006712071 16 7355 XP_006710671 16 7355 NP_006479 16 7355 NP_000072 15 9605 NP_001257903 15 9605 NP_001159450 15 9605 NP_653308 15 9605 NP_001159449 15 9605 NP_001166104 15 9605 NP_001166103 15 9605 NP_002534 15 9605 XP_006721269 15 9605 XP_006719144 15 9605 XP_005263937 15 9605 XP_005263936 15 9605 XP_006711794 15 9605 XP_005273085 15 9605 XP_005273084 15 9605>NP_005148 Length = 1130 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLGIDLSQV 9 Y GIDLSQV Sbjct: 440 YPGIDLSQV 448>NP_009297 Length = 1149 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLGIDLSQV 9 Y GIDLSQV Sbjct: 459 YPGIDLSQV 467>NP_001161710 Length = 1058 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLGIDLSQV 9 Y GIDLSQV Sbjct: 465 YPGIDLSQV 473>NP_001161709 Length = 1079 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLGIDLSQV 9 Y GIDLSQV Sbjct: 486 YPGIDLSQV 494>NP_001161708 Length = 1161 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLGIDLSQV 9 Y GIDLSQV Sbjct: 465 YPGIDLSQV 473>NP_009298 Length = 1182 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLGIDLSQV 9 Y GIDLSQV Sbjct: 486 YPGIDLSQV 494>NP_001129473 Length = 542 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLGIDLSQV 9 Y GIDLSQV Sbjct: 465 YPGIDLSQV 473>NP_005149 Length = 1167 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLGIDLSQV 9 Y GIDLSQV Sbjct: 471 YPGIDLSQV 479>NP_001161711 Length = 1043 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLGIDLSQV 9 Y GIDLSQV Sbjct: 450 YPGIDLSQV 458>XP_005245145 Length = 1146 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLGIDLSQV 9 Y GIDLSQV Sbjct: 450 YPGIDLSQV 458>NP_001129472 Length = 1064 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YLGIDLSQV 9 Y GIDLSQV Sbjct: 471 YPGIDLSQV 479>NP_072089 Length = 481 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GIDLSQV 9 G+DLSQV Sbjct: 370 GLDLSQV 376>NP_001273572 Length = 361 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LGIDLSQV 9 LG+DLS++ Sbjct: 162 LGVDLSKI 169>NP_057026 Length = 417 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LGIDLSQV 9 LG+DLS++ Sbjct: 162 LGVDLSKI 169>NP_001020016 Length = 633 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 YLGIDLSQV 9 +LG+D+S+V Sbjct: 351 HLGVDVSRV 359>NP_964012 Length = 706 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 YLGIDLSQV 9 +LG+D+S+V Sbjct: 424 HLGVDVSRV 432>NP_008865 Length = 652 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 YLGIDLSQV 9 +LG+D+S+V Sbjct: 370 HLGVDVSRV 378>NP_001248309 Length = 637 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 YLGIDLSQV 9 +LG+D+S+V Sbjct: 355 HLGVDVSRV 363>XP_005272689 Length = 481 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GIDLSQV 9 G+DLSQV Sbjct: 370 GLDLSQV 376>XP_006716632 Length = 296 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LGIDLSQV 9 LG+DLS++ Sbjct: 41 LGVDLSKI 48>XP_005250984 Length = 296 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LGIDLSQV 9 LG+DLS++ Sbjct: 41 LGVDLSKI 48>XP_006716631 Length = 304 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LGIDLSQV 9 LG+DLS++ Sbjct: 49 LGVDLSKI 56>XP_005250983 Length = 417 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LGIDLSQV 9 LG+DLS++ Sbjct: 162 LGVDLSKI 169>XP_006710903 Length = 649 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 YLGIDLSQV 9 +LG+D+S+V Sbjct: 424 HLGVDVSRV 432>NP_055132 Length = 415 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GIDLSQV 9 G+DLSQ+ Sbjct: 49 GLDLSQI 55>NP_001009 Length = 145 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YLGIDLSQV 9 Y G+DL Q+ Sbjct: 17 YRGVDLDQL 25>NP_075048 Length = 1088 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YLGIDLSQ 8 Y+G DL+Q Sbjct: 19 YIGTDLTQ 26>NP_001124397 Length = 538 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLGIDLSQV 9 Y G+DLS++ Sbjct: 146 YKGLDLSKL 154>NP_055405 Length = 538 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YLGIDLSQV 9 Y G+DLS++ Sbjct: 146 YKGLDLSKL 154>NP_055906 Length = 1720 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LGIDLSQV 9 LG+DL++V Sbjct: 249 LGLDLTEV 256>NP_001171671 Length = 672 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGIDLSQV 9 LG+ LSQV Sbjct: 116 LGVPLSQV 123>NP_006768 Length = 672 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGIDLSQV 9 LG+ LSQV Sbjct: 116 LGVPLSQV 123>NP_001013652 Length = 407 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 YLGIDLS 7 YL IDLS Sbjct: 256 YLAIDLS 262>XP_006720146 Length = 1226 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LGIDLSQV 9 LG+DL++V Sbjct: 249 LGLDLTEV 256>XP_005267508 Length = 1773 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LGIDLSQV 9 LG+DL++V Sbjct: 249 LGLDLTEV 256>XP_006712074 Length = 325 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GIDLSQV 9 G+D+SQV Sbjct: 80 GVDVSQV 86>XP_005264351 Length = 344 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GIDLSQV 9 G+D+SQV Sbjct: 126 GVDVSQV 132>XP_006712072 Length = 370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GIDLSQV 9 G+D+SQV Sbjct: 125 GVDVSQV 131>XP_006712071 Length = 371 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GIDLSQV 9 G+D+SQV Sbjct: 126 GVDVSQV 132>XP_006710671 Length = 340 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 YLGIDLS 7 YL IDLS Sbjct: 189 YLAIDLS 195>NP_006479 Length = 298 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GIDLSQV 9 G+D+SQV Sbjct: 80 GVDVSQV 86>NP_000072 Length = 3801 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YLGIDLSQV 9 Y G+D+S V Sbjct: 3383 YFGMDVSAV 3391>NP_001257903 Length = 5121 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YLGIDLS 7 +LGID+S Sbjct: 2019 HLGIDIS 2025>NP_001159450 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LGIDLSQV 9 LG D SQV Sbjct: 319 LGADFSQV 326>NP_653308 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LGIDLSQV 9 LG D SQV Sbjct: 319 LGADFSQV 326>NP_001159449 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LGIDLSQV 9 LG D SQV Sbjct: 319 LGADFSQV 326>NP_001166104 Length = 189 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGIDLSQV 9 LG+ LSQV Sbjct: 56 LGMQLSQV 63>NP_001166103 Length = 181 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGIDLSQV 9 LG+ LSQV Sbjct: 56 LGMQLSQV 63>NP_002534 Length = 273 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGIDLSQV 9 LG+ LSQV Sbjct: 56 LGMQLSQV 63>XP_006721269 Length = 5138 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 YLGIDLS 7 +LGID+S Sbjct: 2036 HLGIDIS 2042>XP_006719144 Length = 217 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LGIDLSQV 9 LG+ LSQV Sbjct: 56 LGMQLSQV 63>XP_005263937 Length = 758 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LGIDLSQV 9 LG D SQV Sbjct: 243 LGADFSQV 250>XP_005263936 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LGIDLSQV 9 LG D SQV Sbjct: 319 LGADFSQV 326>XP_006711794 Length = 3022 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YLGIDLSQV 9 Y G+D+S V Sbjct: 2604 YFGMDVSAV 2612>XP_005273085 Length = 3755 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YLGIDLSQV 9 Y G+D+S V Sbjct: 3337 YFGMDVSAV 3345>XP_005273084 Length = 3801 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 YLGIDLSQV 9 Y G+D+S V Sbjct: 3383 YFGMDVSAV 3391Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.149 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 449,233 Number of extensions: 507 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |