Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

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• Cancer-specific
• Epitope Search
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• Browse Gene
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• Sequence Similarity
• Partially Personalized
• Submit a Protein
• Vaccine Target
• Proteome Data
• NGS data
• BLAST & Predict
• Fully Personalized
• Proteins Pair
• Proteome Pair
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• Cross Reactivity
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Blast-Search of mutated query peptide against human proteome

Query: 1 YRKQVRGP 8 YR Q RGP Sbjct: 469 YRNQPRGP 476

>XP_006720841
          Length = 973

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   YRKQVRGP 8
           YR Q RGP
Sbjct: 469 YRNQPRGP 476

>XP_005254853
          Length = 974

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   YRKQVRGP 8
           YR Q RGP
Sbjct: 469 YRNQPRGP 476

>NP_689585
          Length = 1437

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    YRKQVRGPE 9
            YR +VRG E
Sbjct: 1381 YRMEVRGTE 1389

>NP_057245
          Length = 340

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   YRKQVRGPE 9
           YR  ++GPE
Sbjct: 320 YRDLIKGPE 328

>NP_001008536
          Length = 904

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   RKQVRGPE 9
           RK+ RGPE
Sbjct: 391 RKERRGPE 398

>NP_001157666
          Length = 422

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   RKQVRGPE 9
           +KQ++GPE
Sbjct: 294 QKQLQGPE 301

>NP_001157661
          Length = 433

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   RKQVRGPE 9
           +KQ++GPE
Sbjct: 306 QKQLQGPE 313

>NP_005808
          Length = 434

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   RKQVRGPE 9
           +KQ++GPE
Sbjct: 306 QKQLQGPE 313

>NP_001264044
          Length = 4516

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    YRKQVRGP 8
            YR ++RGP
Sbjct: 4481 YRTKLRGP 4488

>NP_057204
          Length = 624

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RKQVRGPE 9
           R+Q+ GPE
Sbjct: 272 RQQISGPE 279

>NP_899196
          Length = 624

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RKQVRGPE 9
           R+Q+ GPE
Sbjct: 272 RQQISGPE 279

>NP_006548
          Length = 226

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   YRKQVRGP 8
           Y++QVR P
Sbjct: 193 YQRQVRAP 200

>NP_870987
          Length = 561

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   YRKQVRGP 8
           Y++QVR P
Sbjct: 193 YQRQVRAP 200

>NP_001032394
          Length = 321

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1  YRKQVRGPE 9
          YRK   GPE
Sbjct: 50 YRKPYPGPE 58

>NP_001010861
          Length = 316

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1  YRKQVRGPE 9
          YRK   GPE
Sbjct: 50 YRKPYPGPE 58

>NP_001124337
          Length = 226

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   YRKQVRGP 8
           Y++QVR P
Sbjct: 193 YQRQVRAP 200

>XP_005251411
          Length = 226

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   YRKQVRGP 8
           Y++QVR P
Sbjct: 193 YQRQVRAP 200

>XP_006716781
          Length = 387

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  YRKQV