Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_789765 21 229 NP_001123914 21 229 NP_005334 21 229 NP_004976 21 229 NP_203524 21 229 NP_002515 21 229 XP_006725199 21 229 XP_006719132 21 229 XP_006718280 21 229 NP_001078518 18 1935 NP_036351 18 1935 NP_001239019 18 1935 XP_005247286 18 1935 XP_005247285 18 1935 NP_071351 17 2528 NP_055568 17 2528 NP_001166599 17 2528 NP_057342 17 2528 XP_005271906 17 2528 XP_006718144 17 2528 XP_005271905 17 2528 XP_005271904 17 2528 XP_005271903 17 2528 NP_689967 17 4312 NP_002411 16 5631 NP_001238953 16 5631 NP_001238949 16 5631 NP_001127890 16 5631 NP_060662 16 5631 XP_005267468 16 5631 XP_005267467 16 5631 NP_055765 16 5631 NP_001116801 16 5631 NP_065979 16 7355 NP_001035517 16 7355 NP_001185642 16 7355 NP_689646 16 7355 NP_940841 16 7355 NP_620158 16 7355 NP_001165108 16 7355 NP_005317 16 7355 NP_001273178 16 7355 XP_006718830 16 7355 XP_006712361 16 7355 XP_005246377 16 7355 XP_006712360 16 7355 XP_006712359 16 7355 XP_005246376 16 7355 NP_001004484 16 7355 NP_663615 15 9605 NP_689971 15 9605 NP_001264743 15 9605 NP_001264742 15 9605 NP_008931 15 9605 NP_001268372 15 9605 XP_006724388 15 9605 XP_006724387 15 9605 XP_006724386 15 9605 XP_006724385 15 9605>NP_789765 Length = 170 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YSAMTDQYM 9 YSAM DQYM Sbjct: 64 YSAMRDQYM 72>NP_001123914 Length = 189 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YSAMTDQYM 9 YSAM DQYM Sbjct: 64 YSAMRDQYM 72>NP_005334 Length = 189 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YSAMTDQYM 9 YSAM DQYM Sbjct: 64 YSAMRDQYM 72>NP_004976 Length = 188 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YSAMTDQYM 9 YSAM DQYM Sbjct: 64 YSAMRDQYM 72>NP_203524 Length = 189 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YSAMTDQYM 9 YSAM DQYM Sbjct: 64 YSAMRDQYM 72>NP_002515 Length = 189 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YSAMTDQYM 9 YSAM DQYM Sbjct: 64 YSAMRDQYM 72>XP_006725199 Length = 170 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YSAMTDQYM 9 YSAM DQYM Sbjct: 64 YSAMRDQYM 72>XP_006719132 Length = 189 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YSAMTDQYM 9 YSAM DQYM Sbjct: 64 YSAMRDQYM 72>XP_006718280 Length = 170 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 YSAMTDQYM 9 YSAM DQYM Sbjct: 64 YSAMRDQYM 72>NP_001078518 Length = 208 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YSAMTDQYM 9 +SAM +QYM Sbjct: 74 FSAMREQYM 82>NP_036351 Length = 208 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YSAMTDQYM 9 +SAM +QYM Sbjct: 74 FSAMREQYM 82>NP_001239019 Length = 208 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YSAMTDQYM 9 +SAM +QYM Sbjct: 74 FSAMREQYM 82>XP_005247286 Length = 170 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YSAMTDQYM 9 +SAM +QYM Sbjct: 74 FSAMREQYM 82>XP_005247285 Length = 208 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YSAMTDQYM 9 +SAM +QYM Sbjct: 74 FSAMREQYM 82>NP_071351 Length = 2752 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 YSAMTDQYM 9 YSA+TD Y+ Sbjct: 2183 YSAVTDVYV 2191>NP_055568 Length = 1282 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 MTDQYM 9 MTDQYM Sbjct: 473 MTDQYM 478>NP_001166599 Length = 579 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YSAMTDQYM 9 Y+AM+D Y+ Sbjct: 48 YTAMSDSYL 56>NP_057342 Length = 579 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YSAMTDQYM 9 Y+AM+D Y+ Sbjct: 48 YTAMSDSYL 56>XP_005271906 Length = 879 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 MTDQYM 9 MTDQYM Sbjct: 473 MTDQYM 478>XP_006718144 Length = 886 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 MTDQYM 9 MTDQYM Sbjct: 473 MTDQYM 478>XP_005271905 Length = 1219 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 MTDQYM 9 MTDQYM Sbjct: 473 MTDQYM 478>XP_005271904 Length = 1219 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 MTDQYM 9 MTDQYM Sbjct: 410 MTDQYM 415>XP_005271903 Length = 1282 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 MTDQYM 9 MTDQYM Sbjct: 473 MTDQYM 478>NP_689967 Length = 777 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SAMTDQYM 9 S MTD+Y+ Sbjct: 193 SVMTDEYL 200>NP_002411 Length = 1603 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YSAMTDQYM 9 YS++TDQ + Sbjct: 1458 YSSITDQQL 1466>NP_001238953 Length = 1625 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YSAMTDQYM 9 YS++TDQ + Sbjct: 1480 YSSITDQQL 1488>NP_001238949 Length = 1642 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YSAMTDQYM 9 YS++TDQ + Sbjct: 1497 YSSITDQQL 1505>NP_001127890 Length = 527 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YSAMTDQYM 9 Y A+ D YM Sbjct: 89 YEAIADHYM 97>NP_060662 Length = 708 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YSAMTDQYM 9 Y A+ D YM Sbjct: 270 YEAIADHYM 278>XP_005267468 Length = 713 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YSAMTDQY 8 +SA TD+Y Sbjct: 277 FSAQTDKY 284>XP_005267467 Length = 713 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YSAMTDQY 8 +SA TD+Y Sbjct: 277 FSAQTDKY 284>NP_055765 Length = 644 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YSAMTDQY 8 +SA TD+Y Sbjct: 277 FSAQTDKY 284>NP_001116801 Length = 713 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YSAMTDQY 8 +SA TD+Y Sbjct: 277 FSAQTDKY 284>NP_065979 Length = 1215 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SAMTDQY 8 +AMTD+Y Sbjct: 431 TAMTDKY 437>NP_001035517 Length = 260 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AMTDQYM 9 A+TD YM Sbjct: 8 ALTDNYM 14>NP_001185642 Length = 470 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 YSAMTDQ 7 YS MTD+ Sbjct: 5 YSVMTDE 11>NP_689646 Length = 612 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YSAMTDQY 8 Y+A TDQ+ Sbjct: 479 YNATTDQW 486>NP_940841 Length = 612 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YSAMTDQY 8 Y+A TDQ+ Sbjct: 479 YNATTDQW 486>NP_620158 Length = 591 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YSAMTDQY 8 Y A+ DQY Sbjct: 267 YQAILDQY 274>NP_001165108 Length = 299 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YSAMTDQY 8 Y A+ DQY Sbjct: 181 YQAILDQY 188>NP_005317 Length = 308 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AMTDQYM 9 A+TD YM Sbjct: 56 ALTDNYM 62>NP_001273178 Length = 236 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AMTDQYM 9 A+TD YM Sbjct: 56 ALTDNYM 62>XP_006718830 Length = 612 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 YSAMTDQY 8 Y+A TDQ+ Sbjct: 479 YNATTDQW 486>XP_006712361 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YSAMTDQY 8 Y A+ DQY Sbjct: 121 YQAILDQY 128>XP_005246377 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YSAMTDQY 8 Y A+ DQY Sbjct: 121 YQAILDQY 128>XP_006712360 Length = 505 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YSAMTDQY 8 Y A+ DQY Sbjct: 181 YQAILDQY 188>XP_006712359 Length = 577 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YSAMTDQY 8 Y A+ DQY Sbjct: 253 YQAILDQY 260>XP_005246376 Length = 612 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 YSAMTDQY 8 Y A+ DQY Sbjct: 288 YQAILDQY 295>NP_001004484 Length = 346 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 YSAMTDQYM 9 YSAMT+ ++ Sbjct: 38 YSAMTEFFL 46>NP_663615 Length = 402 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YSAMTDQYM 9 Y+A+ D+Y+ Sbjct: 133 YAAIEDEYV 141>NP_689971 Length = 585 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YSAMTDQYM 9 Y M+D YM Sbjct: 49 YPPMSDPYM 57>NP_001264743 Length = 588 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YSAMTDQYM 9 Y M+D YM Sbjct: 52 YPPMSDPYM 60>NP_001264742 Length = 588 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 YSAMTDQYM 9 Y M+D YM Sbjct: 52 YPPMSDPYM 60>NP_008931 Length = 258 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 YSAMTDQ 7 YSA TDQ Sbjct: 136 YSADTDQ 142>NP_001268372 Length = 273 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 YSAMTDQ 7 YSA TDQ Sbjct: 136 YSADTDQ 142>XP_006724388 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YSAMTDQYM 9 Y+A+ D+Y+ Sbjct: 62 YAAIEDEYV 70>XP_006724387 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YSAMTDQYM 9 Y+A+ D+Y+ Sbjct: 62 YAAIEDEYV 70>XP_006724386 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YSAMTDQYM 9 Y+A+ D+Y+ Sbjct: 62 YAAIEDEYV 70>XP_006724385 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 YSAMTDQYM 9 Y+A+ D+Y+ Sbjct: 62 YAAIEDEYV 70Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.118 0.335 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 404,255 Number of extensions: 680 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |