ccPDB: Compilation and Creation of Datasets from PDB


HOME	Help	Statistics	Acknowledgement	Developers	Contact

Irregular Secondary Structure

Here we have provided different modules which allows users to extract PDB chain IDs with desired information by using their own PDB list. This allows user to creating irregular secondary structure datasets, mainly tight turns, beta-hairpins , bulges and psiloop
For more information click help

Please upload your file. Do upload more than 1 PDB chain ids.

Name of turn	Range: Number of Turns			Submit/Reset
	Upload PDB chain ID list Example	Minimum	Maximum	Submit/Reset

Beta Turn
Gamma Turn
Bulges

Irregular Secondary Structure

Turn Types Datasets:

Beta Turn Types Beta turn types dataset.

Gamma Turn Types Gamma turn types datasets

Beta Bulges Types Five types of Beta bulges dataset.

Irregular Secondary Structure

Turn Types Datasets:

Beta Turn Types Beta turn types dataset. Gamma Turn Types Gamma turn types datasets Beta Bulges Types Five types of Beta bulges dataset.

Beta Turn Types Beta turn types dataset.

Gamma Turn Types Gamma turn types datasets

Beta Bulges Types Five types of Beta bulges dataset.