Color Notation for PM Score |
< -16 | |
-16 to -14 | |
-14 to -12 | |
-12 to -10 | |
-10 to -8 | |
-8 to -6 | |
-6 to -4 | |
-4 to -2 | |
-2 to 0 | |
2 to 0 | |
4 to 2 | |
6 to 4 | |
8 to 6 | |
10 to 8 | |
12 to 10 | |
14 to 12 | |
16 to 14 | |
> 16 | |
|
Property-based QM for HemoPI-1 dataset. For each position frequency of residues falling into a particular category of physicochemical property (11 categories in total) is calculated for both positive and negative dataset and final propensity value represents the substraction of frequency of a residues in a particular class in negative dataset from that of positive dataset.eg. positive, aliphatic and hydrophobic residues are preferred in positive datastes at most of the positions.
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Pos | Aliphatic | charged | Positive | Negative | Aromatic | Hydrophobic | Neutral | Polar | Tiny | Small | Large | 1 | -4.16 | -0.54 | 11.05 | -11.60 | 7.79 | 9.96 | -4.35 | -5.61 | 1.81 | -10.51 | 8.69 | 2 | 22.46 | -11.59 | -1.27 | -10.33 | 15.04 | 43.12 | -28.62 | -14.50 | -23.73 | 8.88 | 14.86 | 3 | -4.35 | -2.18 | 6.34 | -8.51 | 8.88 | 5.08 | 4.35 | -9.42 | -7.43 | 0.18 | 7.24 | 4 | -2.71 | 8.70 | 19.93 | -11.23 | 4.16 | 6.34 | -7.07 | 0.72 | -0.91 | -5.98 | 6.89 | 5 | 9.42 | 1.63 | 10.32 | -8.70 | 6.34 | 19.20 | -14.86 | -4.16 | -9.96 | 2.53 | 7.61 | 6 | 23.37 | -10.33 | -0.37 | -9.96 | 5.26 | 37.32 | -23.37 | -13.58 | -16.49 | 8.52 | 8.33 | 7 | -2.17 | 15.58 | 27.72 | -12.14 | 7.61 | 2.35 | -10.50 | 8.70 | -18.30 | 3.62 | 15.22 | 8 | 1.63 | 3.26 | 10.87 | -7.61 | 2.72 | 9.78 | -8.33 | -0.55 | 1.08 | -2.54 | 2.35 | 9 | 11.24 | -5.61 | 5.61 | -11.24 | 3.26 | 20.29 | -12.14 | -7.25 | -13.95 | 10.68 | 4.16 | 10 | 3.99 | -5.25 | 4.71 | -9.96 | -1.27 | 6.52 | 5.44 | -11.77 | 8.33 | -8.16 | 0.00 | 11 | 1.26 | 11.59 | 23.36 | -11.77 | -1.63 | 6.16 | -11.05 | 4.89 | -8.15 | 7.61 | 0.55 | 12 | 9.06 | 3.08 | 12.50 | -9.42 | 3.26 | 10.69 | -9.96 | -1.27 | -11.23 | 8.70 | 1.99 | 13 | 17.03 | -9.60 | 2.72 | -12.32 | -1.27 | 19.38 | -0.55 | -15.76 | 3.62 | -0.55 | 0.00 | 14 | 10.68 | -3.08 | 6.89 | -9.97 | -1.81 | 11.24 | -4.17 | -6.88 | -4.17 | 4.71 | -0.36 | 15 | -0.90 | 3.81 | 14.13 | -10.33 | 3.08 | 4.71 | -3.44 | 3.26 | 0.54 | 1.82 | 2.17 | 16 | 7.97 | 2.54 | 6.16 | -3.62 | -0.90 | 7.79 | -6.70 | -1.09 | -1.45 | 5.62 | -4.16 | 17 | 6.16 | -5.07 | 1.63 | -6.71 | 5.07 | 11.23 | -2.36 | -7.97 | -1.09 | -1.27 | 3.26 | 18 | -4.35 | 6.52 | 11.96 | -5.44 | 1.81 | -1.81 | 1.45 | 2.36 | 2.54 | -2.90 | 2.35 | 19 | -1.81 | 2.90 | 5.43 | -2.54 | -0.54 | 3.80 | -4.17 | 0.18 | 3.44 | -3.08 | -0.54 | 20 | 6.71 | -4.53 | 2.36 | -6.89 | -0.37 | 7.97 | 0.18 | -4.17 | 1.81 | 4.34 | -2.18 | 21 | 3.99 | -6.52 | -0.36 | -6.16 | -2.71 | 6.52 | 1.45 | -7.97 | 3.26 | 0.90 | -4.16 | 22 | 0.36 | 1.45 | 6.53 | -5.08 | -3.08 | -0.72 | -1.64 | 1.99 | -0.73 | 1.44 | -1.09 | 23 | -0.54 | 0.36 | 4.35 | -3.99 | 0.18 | 1.64 | -1.45 | 1.09 | 0.00 | 1.44 | -0.18 | 24 | -1.63 | 0.72 | 2.72 | -2.00 | -1.45 | 0.00 | 1.45 | 0.18 | 1.81 | 0.18 | -0.36 | 25 | 2.54 | 2.90 | 4.16 | -1.27 | 2.18 | 2.35 | 0.72 | 0.18 | -1.27 | 1.63 | 2.90 | 26 | -1.99 | 1.09 | 1.99 | -0.90 | -1.09 | -1.99 | 0.00 | 1.99 | 2.36 | -2.71 | 0.36 | 27 | -3.08 | -1.81 | -1.45 | -0.37 | -0.90 | -2.35 | -0.54 | 1.81 | 2.18 | -1.99 | -1.27 | 28 | 0.91 | -0.73 | 0.90 | -1.63 | -0.54 | 0.00 | 3.26 | -0.72 | 3.44 | -0.91 | 0.00 | 29 | 3.08 | -0.36 | -1.08 | 0.72 | -0.36 | 3.62 | 0.00 | 0.00 | 1.08 | 3.62 | -1.09 | 30 | 0.54 | 0.54 | 0.91 | -0.36 | -0.18 | 0.00 | 4.16 | -0.36 | 1.27 | 3.08 | -0.55 |
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