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Next   PreviousPage - 1 of 9 HIVsir ID HIV Strain NCBI Accession Target Gene Position of siRNA target Sense Sequence of siRNA Efficacy (%) Target Conservation * Cell line PubMed 1550 HIV-1 (NL4-3) AF324493 LTR 626 UCUCUAGCAGUGGCGCCCG 15.00 701(46.86%) 293 T 16840344 1567 HIV-1 (NL4-3) AF324493 Tat/Rev 5982 GCGGAGACAGCGACGAAGAGCUCAUCA 95.00 8(0.53%) 293 T 18461053 1013 HIV-1 (IIIB) EU541617 Gag K*1475 GAGAACCAAGGGGAAGUGACA 75.00 711(47.53%) 293 T 12391237 1014 HIV-1 (IIIB) EU541617 Gag K*896 GGGCAAGCAGGGAGCUAGAAC 89.00 331(22.13%) 293 T 12391237 1054 HIV-1 (NL4-3) AF324493 Tat 5863 AAGCAUCCAGGAAGUCAGCCU 34.00 261(17.45%) 293 T 15564478 1055 HIV-1 (NL4-3) AF324493 Env 7914 AACUCACAGUCUGGGGCAUCA 58.00 291(19.45%) 293 T 15564478 1056 HIV-1 (NL4-3) AF324493 Rev/Env 8415 AAGAAGAAGGUGGAGAGAGAG 47.00 202(13.50%) 293 T 15564478 1057 HIV-1 (NL4-3) AF324493 Rev/Env 8548 AACGAGGAUUGUGGAACUUCU 44.00 124(8.29%) 293 T 15564478 1058 HIV-1 (NL4-3) AF324493 Env 8749 AAGAAUAAGACAGGGCUUGGA 69.00 178(11.90%) 293 T 15564478 1059 HIV-1 (NL4-3) AF324493 Env 8752 AAUAAGACAGGGCUUGGAAAG 76.00 168(11.23%) 293 T 15564478 1060 HIV-1 (NL4-3) AF324493 Nef 8834 AAGGGAAAGAAUGAGACGAGC 49.00 97(6.48%) 293 T 15564478 1061 HIV-1 (NL4-3) AF324493 Nef 9059 AAAAGAAAAGGGGGGACUGGA 63.00 1213(81.08%) 293 T 15564478 1062 HIV-1 (NL4-3) AF324493 Nef 9139 AAGGCUACUUCCCUGAUUGGC 48.00 493(32.95%) 293 T 15564478 1561 HIV-1 (LAI) K02013 Pol N/A AUGGCAGGAAGAAGCGGAG 87.00 1100(73.53%) 293 T 18180777 1118 HIV-1 (LAI) K02013 Gag 326 AAGGAGAGAGAUGGGUGCG 52.00 893(59.69%) 293 T 16959541 1119 HIV-1 (LAI) K02013 Gag 327 AGGAGAGAGAUGGGUGCGA 93.00 920(61.50%) 293 T 16959541 1120 HIV-1 (LAI) K02013 Gag 328 GGAGAGAGAUGGGUGCGAG 93.00 926(61.90%) 293 T 16959541 1121 HIV-1 (LAI) K02013 Gag 329 GAGAGAGAUGGGUGCGAGA 98.00 920(61.50%) 293 T 16959541 1122 HIV-1 (LAI) K02013 Gag 330 AGAGAGAUGGGUGCGAGAG 94.00 920(61.50%) 293 T 16959541 1123 HIV-1 (LAI) K02013 Gag 331 GAGAGAUGGGUGCGAGAGC 67.00 929(62.10%) 293 T 16959541 1124 HIV-1 (LAI) K02013 Gag 332 AGAGAUGGGUGCGAGAGCG 83.00 930(62.17%) 293 T 16959541 1125 HIV-1 (LAI) K02013 Gag 333 GAGAUGGGUGCGAGAGCGU 78.00 928(62.03%) 293 T 16959541 1126 HIV-1 (LAI) K02013 Gag 334 AGAUGGGUGCGAGAGCGUC 90.00 936(62.57%) 293 T 16959541 1127 HIV-1 (LAI) K02013 Gag 1146 AAUAAAAUAGUAAGAAUGU 26.00 1022(68.32%) 293 T 16959541 1128 HIV-1 (LAI) K02013 Gag 1147 AUAAAAUAGUAAGAAUGUA 30.00 1026(68.58%) 293 T 16959541

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