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Next   PreviousPage - 1 of 3 HIVsir ID HIV Strain NCBI Accession Target Gene Position of siRNA target Sense Sequence of siRNA Efficacy (%) GC Content (%) Cell line PubMed 1558 HIV-1 (NL4-3) AF324493 Env 6430 GGCUGGUUUUGCGAUUCUA 0.00 38 293 T 17173982 1139 HIV-1 (LAI) K02013 Pol 1959 GGAAACCAAAAAUGAUAGG 0.00 29 293 T 16959541 1513 HIV-1 (NL4-3) AF324493 Env 1437 UGAAUUAUAUAAAUAUAAAG 0.00 8 HEK 293a 19497094 1089 HIV-1 (NL4-3) AF324493 Nef 8809 AAGUAGUGUGAUUGCAUGGCC 10.00 38 293 T 15750613 1183 HIV-1 (LAI) K02013 Pol/Vif 4623 AUGGAAAACAGAUGGCAGG 10.00 38 293 T 16959541 1627 Hiv-1 Ptar-gl2(vctr) K02013 LTR N/A AGACCAGAUCUGAGCCUGGGA 10.00 46 Hela S3 14762201 1509 HIV-1 (NL4-3) AF324493 Env 1433 GAAGUGAAUUAUAUAAAUAU 10.10 12 HEK 293a 19497094 1621 NL4-3 clone 1-D4 AF078150 Int 79 CCUACCACCUGUAGUAGCA 11.00 42 Hela 17592732 1450 HIV-1 (NL4-3) AF324493 Pol 251 CAGAUGAUACAGUAUUAGAA 11.30 24 HEK 293a 19497094 1512 HIV-1 (NL4-3) AF324493 Env 1436 GUGAAUUAUAUAAAUAUAAA 12.00 8 HEK 293a 19497094 1154 HIV-1 (LAI) K02013 Pol 4366 UAAAAGAAAAGGGGGGAUU 12.00 29 293 T 16959541 1160 HIV-1 (LAI) K02013 Pol 4372 AAAAGGGGGGAUUGGGGGG 13.00 50 293 T 16959541 1220 HIV-1 (LAI) K02013 Pol 3755 AUUGGAGGAAAUGAACAAG 14.00 29 293 T 17628029 1156 HIV-1 (LAI) K02013 Pol 4368 AAAGAAAAGGGGGGAUUGG 14.00 38 293 T 16959541 1424 HIV-1 (NL4-3) AF324493 LTR 506 GGAACCCACUGCUUAAGCCU 14.90 44 HEK 293a 19497094 1550 HIV-1 (NL4-3) AF324493 LTR 626 UCUCUAGCAGUGGCGCCCG 15.00 54 293 T 16840344 1569 HIV-1 (NL4-3) AF324493 Nef 8950 GUGCCUGGCUAGAAGCACA 15.00 46 SupT 18727943 1409 HIV-1 (LAI) K02013 Gag 1366 AAGAAAUGAUGACAGCAUG 15.00 29 293 T 19384894 1171 HIV-1 (LAI) K02013 Pol 4535 CUCUGGAAAGGUGAAGGGG 15.00 46 293 T 16959541 1166 HIV-1 (LAI) K02013 Pol 4470 UUCAAAAUUUUCGGGUUUA 15.00 21 293 T 16959541 1184 HIV-1 (LAI) K02013 Pol/Vif 4624 UGGAAAACAGAUGGCAGGU 15.00 38 293 T 16959541 1628 Hiv-1 Ptar-gl2(vctr) K02013 LTR N/A CUCUCUGGUUAGACCAGAUCU 16.00 38 Hela S3 14762201 1172 HIV-1 (LAI) K02013 Pol 4536 UCUGGAAAGGUGAAGGGGC 16.00 46 293 T 16959541 1046 HIV-1 (NL4-3) AF324493 Env N/A TGTCTGATATAGTGCAGCAGC 17.00 38 293 T 15336659 1157 HIV-1 (LAI) K02013 Pol 4369 AAGAAAAGGGGGGAUUGGG 18.00 42 293 T 16959541

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