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HIVsir ID
HIV Strain
NCBI Accession
Target Gene
Position of siRNA target
Sense Sequence of siRNA
Efficacy (%)
Target Conservation *
Cell line
PubMed
1308
93IN101
AB023804
LTR
505
GGGAACCCACUGCUUAAGCCU
85.30
584(39.04%)
Hela
17996047
1309
93IN101
AB023804
LTR
509
ACCCACUGCUUAAGCCUCAAU
94.10
652(43.58%)
Hela
17996047
1310
93IN101
AB023804
LTR
510
CCCACUGCUUAAGCCUCAAUA
95.60
654(43.72%)
Hela
17996047
1311
93IN101
AB023804
LTR
512
CACUGCUUAAGCCUCAAUAAA
95.60
462(30.88%)
Hela
17996047
1312
93IN101
AB023804
LTR
515
UGCUUAAGCCUCAAUAAAGCU
82.40
465(31.08%)
Hela
17996047
1313
93IN101
AB023804
LTR
521
AGCCUCAAUAAAGCUUGCCUU
92.60
446(29.81%)
Hela
17996047
1314
93IN101
AB023804
LTR
575
GACUCUGGUAACUAGAGAUCC
92.60
495(33.09%)
Hela
17996047
1315
93IN101
AB023804
LTR
689
ACGCAGGACUCGGCUUGCUGA
76.50
733(49.00%)
Hela
17996047
1316
93IN101
AB023804
LTR
690
CGCAGGACUCGGCUUGCUGAA
25.00
574(38.37%)
Hela
17996047
1317
93IN101
AB023804
LTR
764
GACUAGCGGAGGCUAGAAGGA
95.60
752(50.27%)
Hela
17996047
1318
93IN101
AB023804
LTR
770
CGGAGGCUAGAAGGAGAGAGA
97.10
776(51.87%)
Hela
17996047
1319
93IN101
AB023804
Gag
1490
GUGACAUAGCAGGAACUACUA
97.10
899(60.09%)
Hela
17996047
1320
93IN101
AB023804
Pol
2329
AGCAGUACAAAUGGCAGUAUU
97.10
1129(75.47%)
Hela
17996047
1321
93IN101
AB023804
Pol
2330
AGGAGCAGAUGAUACAGUAUU
97.10
1159(77.47%)
Hela
17996047
1322
93IN101
AB023804
Pol
2333
AGCAGAUGAUACAGUAUUAGA
98.50
1129(75.47%)
Hela
17996047
1323
93IN101
AB023804
Pol
3000
CAGGGAUGGAAAGGAUCACCA
97.10
883(59.02%)
Hela
17996047
1324
93IN101
AB023804
Pol
3005
AUGGAAAGGAUCACCAGCAAU
97.10
923(61.70%)
Hela
17996047
1325
93IN101
AB023804
Pol
3006
UGGAAAGGAUCACCAGCAAUA
97.10
957(63.97%)
Hela
17996047
1326
93IN101
AB023804
Pol
3011
AGGAUCACCAGCAAUAUUCCA
97.10
774(51.74%)
Hela
17996047
1327
93IN101
AB023804
Pol
4175
UGGAGGAAAUGAACAAGUAGA
98.50
1096(73.26%)
Hela
17996047
1328
93IN101
AB023804
Pol
4373
AGCCAUGCAUGGACAAGUAGA
95.60
658(43.98%)
Hela
17996047
1329
93IN101
AB023804
Pol
4378
UGCAUGGACAAGUAGACUGUA
97.10
699(46.72%)
Hela
17996047
1330
93IN101
AB023804
Pol
4652
UCCCUACAAUCCCCAAAGUCA
97.10
1005(67.18%)
Hela
17996047
1331
93IN101
AB023804
Pol
4746
AAGACAGCAGUACAAAUGGCA
95.60
1030(68.85%)
Hela
17996047
1332
93IN101
AB023804
Pol
4750
CAGCAGUACAAAUGGCAGUAU
95.60
1133(75.74%)
Hela
17996047
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